RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 Q6ZSN1 163 aa10.64□□□□□ -0.71
NUP50-201ENST00000347635 COL27A1Q8IZC6 1860 aaPredicted RBP10.63□□□□□ -0.71
NUP50-201ENST00000347635 Q8N2B8 174 aa10.63□□□□□ -0.71
NUP50-201ENST00000347635 CHD8Q9HCK8 2581 aa10.63□□□□□ -0.71
NUP50-201ENST00000347635 DIRC1Q969H9 104 aa10.63□□□□□ -0.71
NUP50-201ENST00000347635 MKI67P46013 3256 aaKnown RBP10.63□□□□□ -0.71
NUP50-201ENST00000347635 KLK9Q2XQG4 91 aa10.62□□□□□ -0.71
NUP50-201ENST00000347635 REG3AQ06141 175 aa10.62□□□□□ -0.71
NUP50-201ENST00000347635 CHCHD10Q8WYQ3 142 aaPredicted RBP10.62□□□□□ -0.71
NUP50-201ENST00000347635 IGLV1-51P01701 117 aa10.61□□□□□ -0.71
NUP50-201ENST00000347635 ATP5EP2Q5VTU8 51 aa10.61□□□□□ -0.71
NUP50-201ENST00000347635 TRAV23DV6A0A075B6W5 121 aa10.61□□□□□ -0.71
NUP50-201ENST00000347635 UPK3BQ9BT76 320 aa10.61□□□□□ -0.71
NUP50-201ENST00000347635 LINC00694P0DN24 101 aa10.61□□□□□ -0.71
NUP50-201ENST00000347635 KLK12Q9UKR0 248 aa10.61□□□□□ -0.71
NUP50-201ENST00000347635 DEFB105AQ8NG35 78 aa10.6□□□□□ -0.71
NUP50-201ENST00000347635 PDE6GP18545 87 aa10.6□□□□□ -0.71
NUP50-201ENST00000347635 BEAN1Q3B7T3 259 aa10.6□□□□□ -0.71
NUP50-201ENST00000347635 ODF3L2Q3SX64 289 aa10.6□□□□□ -0.71
NUP50-201ENST00000347635 MYO18BQ8IUG5 2567 aa10.6□□□□□ -0.71
NUP50-201ENST00000347635 LINC00482Q8N8I6 264 aa10.6□□□□□ -0.71
NUP50-201ENST00000347635 FAM110AQ9BQ89 295 aa10.6□□□□□ -0.71
NUP50-201ENST00000347635 RPL18AQ02543 176 aaKnown RBP10.59□□□□□ -0.71
NUP50-201ENST00000347635 ZNF462Q96JM2 2506 aa10.59□□□□□ -0.71
NUP50-201ENST00000347635 CSDC2Q9Y534 153 aaKnown RBP10.59□□□□□ -0.71
NUP50-201ENST00000347635 LINC00959A0A1B0GUT2 108 aa10.59□□□□□ -0.71
NUP50-201ENST00000347635 DEFB131BA0A096LNP1 70 aa10.58□□□□□ -0.72
NUP50-201ENST00000347635 RPL28P46779 137 aaKnown RBP10.58□□□□□ -0.72
NUP50-201ENST00000347635 WFDC10AQ9H1F0 79 aa10.58□□□□□ -0.72
NUP50-201ENST00000347635 WNK1Q9H4A3 2382 aa10.57□□□□□ -0.72
NUP50-201ENST00000347635 TRAV10A0A0B4J240 114 aa10.57□□□□□ -0.72
NUP50-201ENST00000347635 COX7CP15954 63 aa10.57□□□□□ -0.72
NUP50-201ENST00000347635 SBSPONQ8IVN8 264 aa10.57□□□□□ -0.72
NUP50-201ENST00000347635 TRANK1O15050 2925 aa10.57□□□□□ -0.72
NUP50-201ENST00000347635 ENHOQ6UWT2 76 aa10.57□□□□□ -0.72
NUP50-201ENST00000347635 COX7BP24311 80 aa10.56□□□□□ -0.72
NUP50-201ENST00000347635 C14orf177Q52M58 125 aa10.56□□□□□ -0.72
NUP50-201ENST00000347635 C1orf158Q8N1D5 194 aa10.56□□□□□ -0.72
NUP50-201ENST00000347635 AGRNO00468 2067 aa10.56□□□□□ -0.72
NUP50-201ENST00000347635 IGHV4-28A0A0C4DH34 117 aa10.55□□□□□ -0.72
NUP50-201ENST00000347635 C6orf99Q4VX62 202 aa10.55□□□□□ -0.72
NUP50-201ENST00000347635 SERP2Q8N6R1 65 aa10.55□□□□□ -0.72
NUP50-201ENST00000347635 FUSP35637 526 aaKnown RBP eCLIP10.55□□□□□ -0.72
NUP50-201ENST00000347635 NREPQ16612 68 aa10.55□□□□□ -0.72
NUP50-201ENST00000347635 Q6JHZ5 121 aa10.54□□□□□ -0.72
NUP50-201ENST00000347635 USP17L23D6RBM5 183 aa10.54□□□□□ -0.72
NUP50-201ENST00000347635 PKD1L2Q7Z442 2459 aa10.53□□□□□ -0.72
NUP50-201ENST00000347635 CD164L2Q6UWJ8 174 aa10.53□□□□□ -0.72
NUP50-201ENST00000347635 A0A087WYN8 130 aa10.53□□□□□ -0.72
NUP50-201ENST00000347635 TMEM258P61165 79 aa10.52□□□□□ -0.72
NUP50-201ENST00000347635 Q8IZM0 81 aa10.52□□□□□ -0.72
NUP50-201ENST00000347635 DOPEY1Q5JWR5 2465 aa10.52□□□□□ -0.73
NUP50-201ENST00000347635 C20orf197Q8N268 126 aa10.52□□□□□ -0.73
NUP50-201ENST00000347635 ETDCA0A1B0GVM5 59 aa10.52□□□□□ -0.73
NUP50-201ENST00000347635 IGHV4-30-4P0DP06 118 aa10.51□□□□□ -0.73
NUP50-201ENST00000347635 C11orf72Q8NBR9 251 aa10.51□□□□□ -0.73
NUP50-201ENST00000347635 IGLV5-39A0A0G2JS06 123 aa10.51□□□□□ -0.73
NUP50-201ENST00000347635 COX17Q14061 63 aa10.51□□□□□ -0.73
NUP50-201ENST00000347635 A0A087WZ39 114 aa10.51□□□□□ -0.73
NUP50-201ENST00000347635 MYO9AB2RTY4 2548 aa10.5□□□□□ -0.73
NUP50-201ENST00000347635 IGLV4-60A0A075B6I1 120 aa10.5□□□□□ -0.73
NUP50-201ENST00000347635 UBE2BP63146 152 aa10.5□□□□□ -0.73
NUP50-201ENST00000347635 HIGD2BQ4VC39 106 aa10.5□□□□□ -0.73
NUP50-201ENST00000347635 TRBV7-7A0A0K0K1E9 115 aa10.49□□□□□ -0.73
NUP50-201ENST00000347635 OXLD1Q5BKU9 147 aa10.49□□□□□ -0.73
NUP50-201ENST00000347635 ABCA2Q9BZC7 2435 aa10.49□□□□□ -0.73
NUP50-201ENST00000347635 FSHBP01225 129 aa10.49□□□□□ -0.73
NUP50-201ENST00000347635 CCKP06307 115 aa10.49□□□□□ -0.73
NUP50-201ENST00000347635 LINC00526Q96FQ7 95 aa10.48□□□□□ -0.73
NUP50-201ENST00000347635 USP9XQ93008 2570 aaPredicted RBP10.47□□□□□ -0.73
NUP50-201ENST00000347635 CDK2AP2O75956 126 aa10.47□□□□□ -0.73
NUP50-201ENST00000347635 IGLV5-45A0A087WSX0 123 aa10.47□□□□□ -0.73
NUP50-201ENST00000347635 FAM236DA0A1B0GTK5 79 aa10.47□□□□□ -0.73
NUP50-201ENST00000347635 FAM236CP0DP71 79 aa10.47□□□□□ -0.73
NUP50-201ENST00000347635 SORL1Q92673 2214 aa10.46□□□□□ -0.73
NUP50-201ENST00000347635 FHL2Q14192 279 aa10.46□□□□□ -0.74
NUP50-201ENST00000347635 NDUFC2O95298 119 aa10.45□□□□□ -0.74
NUP50-201ENST00000347635 LELP1Q5T871 98 aa10.45□□□□□ -0.74
NUP50-201ENST00000347635 XAGE1AQ9HD64 81 aa10.45□□□□□ -0.74
NUP50-201ENST00000347635 Q8N814 137 aa10.45□□□□□ -0.74
NUP50-201ENST00000347635 WFDC9Q8NEX5 89 aa10.44□□□□□ -0.74
NUP50-201ENST00000347635 Q6ZQY7 126 aa10.44□□□□□ -0.74
NUP50-201ENST00000347635 LRRK2Q5S007 2527 aa10.44□□□□□ -0.74
NUP50-201ENST00000347635 LINC00337Q8N6G1 96 aa10.44□□□□□ -0.74
NUP50-201ENST00000347635 LITAFQ99732 161 aa10.44□□□□□ -0.74
NUP50-201ENST00000347635 RANBP2P49792 3224 aaKnown RBP10.44□□□□□ -0.74
NUP50-201ENST00000347635 SCXQ7RTU7 201 aa10.43□□□□□ -0.74
NUP50-201ENST00000347635 Q9UF83 564 aa10.43□□□□□ -0.74
NUP50-201ENST00000347635 USP9YO00507 2555 aaPredicted RBP10.43□□□□□ -0.74
NUP50-201ENST00000347635 KPRPQ5T749 579 aaPredicted RBP10.43□□□□□ -0.74
NUP50-201ENST00000347635 A0A087WVE0 104 aa10.43□□□□□ -0.74
NUP50-201ENST00000347635 ABCA12Q86UK0 2595 aa10.42□□□□□ -0.74
NUP50-201ENST00000347635 LAMA3Q16787 3333 aa10.42□□□□□ -0.74
NUP50-201ENST00000347635 C5orf47Q569G3 176 aa10.41□□□□□ -0.74
NUP50-201ENST00000347635 NTM-AS1Q6ZSK4 140 aa10.41□□□□□ -0.74
NUP50-201ENST00000347635 MUC7Q8TAX7 377 aa10.41□□□□□ -0.74
NUP50-201ENST00000347635 FHL3Q13643 280 aa10.41□□□□□ -0.74
NUP50-201ENST00000347635 BPY2O14599 106 aa10.41□□□□□ -0.74
NUP50-201ENST00000347635 PRR3P79522 188 aaKnown RBP10.4□□□□□ -0.74
NUP50-201ENST00000347635 ZNF575Q86XF7 245 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms