RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 HERVK_113P63121 156 aa10.32□□□□□ -0.76
ARHGEF1-202ENST00000347545 RPL36AP83881 106 aaKnown RBP10.32□□□□□ -0.76
ARHGEF1-202ENST00000347545 RPL36ALQ969Q0 106 aaKnown RBP10.32□□□□□ -0.76
ARHGEF1-202ENST00000347545 CSDC2Q9Y534 153 aaKnown RBP10.32□□□□□ -0.76
ARHGEF1-202ENST00000347545 H7C423 109 aa10.32□□□□□ -0.76
ARHGEF1-202ENST00000347545 SOSTDC1Q6X4U4 206 aa10.32□□□□□ -0.76
ARHGEF1-202ENST00000347545 ZNF625Q96I27 306 aaPredicted RBP10.32□□□□□ -0.76
ARHGEF1-202ENST00000347545 YAE1D1Q9NRH1 226 aa10.32□□□□□ -0.76
ARHGEF1-202ENST00000347545 CDC42SE2Q9NRR3 84 aa10.32□□□□□ -0.76
ARHGEF1-202ENST00000347545 TRAV13-1A0A0B4J241 112 aa10.31□□□□□ -0.76
ARHGEF1-202ENST00000347545 TRAV8-4A0A0B4J246 113 aa10.31□□□□□ -0.76
ARHGEF1-202ENST00000347545 DAZ2Q13117 558 aaKnown RBP10.31□□□□□ -0.76
ARHGEF1-202ENST00000347545 DAZ4Q86SG3 579 aaKnown RBP10.31□□□□□ -0.76
ARHGEF1-202ENST00000347545 DAZ3Q9NR90 486 aaKnown RBP10.31□□□□□ -0.76
ARHGEF1-202ENST00000347545 C19orf73Q9NVV2 129 aa10.31□□□□□ -0.76
ARHGEF1-202ENST00000347545 LOC100131303A0A0U1RQF7 123 aa10.31□□□□□ -0.76
ARHGEF1-202ENST00000347545 PLA2G2AP14555 144 aa10.31□□□□□ -0.76
ARHGEF1-202ENST00000347545 LINC00308Q8TCZ7 52 aa10.31□□□□□ -0.76
ARHGEF1-202ENST00000347545 LINC01006Q8NI28 216 aa10.3□□□□□ -0.76
ARHGEF1-202ENST00000347545 A0A0U1RRA0 63 aa10.29□□□□□ -0.76
ARHGEF1-202ENST00000347545 CHCHD5Q9BSY4 110 aa10.29□□□□□ -0.76
ARHGEF1-202ENST00000347545 SETD2Q9BYW2 2564 aaPredicted RBP10.29□□□□□ -0.76
ARHGEF1-202ENST00000347545 LST1O00453 97 aa10.28□□□□□ -0.76
ARHGEF1-202ENST00000347545 CSNK1G2-AS1Q8NCQ2 148 aa10.28□□□□□ -0.76
ARHGEF1-202ENST00000347545 CCDC168Q8NDH2 2452 aa10.28□□□□□ -0.76
ARHGEF1-202ENST00000347545 MEIG1Q5JSS6 88 aa10.28□□□□□ -0.76
ARHGEF1-202ENST00000347545 RPL35AP18077 110 aaKnown RBP10.27□□□□□ -0.76
ARHGEF1-202ENST00000347545 C2orf82Q6UX34 121 aa10.27□□□□□ -0.77
ARHGEF1-202ENST00000347545 UBE2WQ96B02 151 aa10.26□□□□□ -0.77
ARHGEF1-202ENST00000347545 IGLV1-51P01701 117 aa10.26□□□□□ -0.77
ARHGEF1-202ENST00000347545 C16orf74Q96GX8 76 aa10.25□□□□□ -0.77
ARHGEF1-202ENST00000347545 C16orf95Q9H693 158 aa10.25□□□□□ -0.77
ARHGEF1-202ENST00000347545 CIRBPQ14011 172 aaKnown RBP10.25□□□□□ -0.77
ARHGEF1-202ENST00000347545 TMEM243Q9BU79 118 aa10.25□□□□□ -0.77
ARHGEF1-202ENST00000347545 COX6CP09669 75 aa10.24□□□□□ -0.77
ARHGEF1-202ENST00000347545 RNASE1P07998 156 aaKnown RBP10.24□□□□□ -0.77
ARHGEF1-202ENST00000347545 PRIMA1Q86XR5 153 aa10.24□□□□□ -0.77
ARHGEF1-202ENST00000347545 OVOL2Q9BRP0 275 aa10.24□□□□□ -0.77
ARHGEF1-202ENST00000347545 ACANP16112 2415 aa10.24□□□□□ -0.77
ARHGEF1-202ENST00000347545 H3BT86 120 aa10.23□□□□□ -0.77
ARHGEF1-202ENST00000347545 C2CD3Q4AC94 2353 aa10.23□□□□□ -0.77
ARHGEF1-202ENST00000347545 TRGV2A0A075B6R0 118 aa10.23□□□□□ -0.77
ARHGEF1-202ENST00000347545 TRBV6-4A0A1B0GX49 114 aa10.22□□□□□ -0.77
ARHGEF1-202ENST00000347545 FAM110AQ9BQ89 295 aa10.22□□□□□ -0.77
ARHGEF1-202ENST00000347545 IGLV4-60A0A075B6I1 120 aa10.21□□□□□ -0.77
ARHGEF1-202ENST00000347545 UBE2L6O14933 153 aa10.21□□□□□ -0.77
ARHGEF1-202ENST00000347545 FHL2Q14192 279 aa10.21□□□□□ -0.77
ARHGEF1-202ENST00000347545 ITPR2Q14571 2701 aa10.2□□□□□ -0.78
ARHGEF1-202ENST00000347545 CMC4P56277 68 aaPredicted RBP10.2□□□□□ -0.78
ARHGEF1-202ENST00000347545 DEFB121Q5J5C9 76 aa10.2□□□□□ -0.78
ARHGEF1-202ENST00000347545 MTORP42345 2549 aa10.19□□□□□ -0.78
ARHGEF1-202ENST00000347545 COX7A2LO14548 114 aa10.19□□□□□ -0.78
ARHGEF1-202ENST00000347545 TRGV4A0A0C4DH28 118 aa10.19□□□□□ -0.78
ARHGEF1-202ENST00000347545 KRTAP10-3P60369 221 aa10.18□□□□□ -0.78
ARHGEF1-202ENST00000347545 COX7B2Q8TF08 81 aa10.18□□□□□ -0.78
ARHGEF1-202ENST00000347545 PPDPFQ9H3Y8 114 aa10.18□□□□□ -0.78
ARHGEF1-202ENST00000347545 TRBV6-8A0A0A6YYG3 113 aa10.17□□□□□ -0.78
ARHGEF1-202ENST00000347545 IGKV3OR2-268A0A0C4DH90 116 aa10.17□□□□□ -0.78
ARHGEF1-202ENST00000347545 FAM218AQ96MZ4 157 aa10.17□□□□□ -0.78
ARHGEF1-202ENST00000347545 Q6Q795 121 aa10.16□□□□□ -0.78
ARHGEF1-202ENST00000347545 C22orf24Q9Y442 160 aa10.16□□□□□ -0.78
ARHGEF1-202ENST00000347545 FAM236AA0A1B0GUQ0 79 aa10.16□□□□□ -0.78
ARHGEF1-202ENST00000347545 FAM236BA0A1B0GV22 79 aa10.16□□□□□ -0.78
ARHGEF1-202ENST00000347545 IGHV3OR16-9A0A0B4J2B5 98 aa10.15□□□□□ -0.78
ARHGEF1-202ENST00000347545 IGKV2-28A0A075B6P5 120 aa10.15□□□□□ -0.78
ARHGEF1-202ENST00000347545 IGKV2D-28P01615 120 aa10.15□□□□□ -0.78
ARHGEF1-202ENST00000347545 COPS9Q8WXC6 57 aa10.15□□□□□ -0.79
ARHGEF1-202ENST00000347545 MIR7-3HGQ8N6C7 128 aa10.14□□□□□ -0.79
ARHGEF1-202ENST00000347545 LINC00337Q8N6G1 96 aa10.14□□□□□ -0.79
ARHGEF1-202ENST00000347545 HILS1P60008 231 aa10.13□□□□□ -0.79
ARHGEF1-202ENST00000347545 TOMM7Q9P0U1 55 aa10.13□□□□□ -0.79
ARHGEF1-202ENST00000347545 VWFP04275 2813 aa10.13□□□□□ -0.79
ARHGEF1-202ENST00000347545 GCN1Q92616 2671 aaKnown RBP10.12□□□□□ -0.79
ARHGEF1-202ENST00000347545 DEFB130BP0DP73 79 aa10.12□□□□□ -0.79
ARHGEF1-202ENST00000347545 DEFB130AP0DP74 79 aa10.12□□□□□ -0.79
ARHGEF1-202ENST00000347545 LINC00612Q8N6U2 182 aa10.12□□□□□ -0.79
ARHGEF1-202ENST00000347545 KLK5Q9Y337 293 aaPredicted RBP10.12□□□□□ -0.79
ARHGEF1-202ENST00000347545 FAM240AA0A1B0GVK7 77 aa10.11□□□□□ -0.79
ARHGEF1-202ENST00000347545 SPATA3Q8NHX4 192 aa10.11□□□□□ -0.79
ARHGEF1-202ENST00000347545 SMR3AQ99954 134 aa10.11□□□□□ -0.79
ARHGEF1-202ENST00000347545 A0A087WZ39 114 aa10.11□□□□□ -0.79
ARHGEF1-202ENST00000347545 LOC107984640A0A0U1RRK4 108 aa10.1□□□□□ -0.79
ARHGEF1-202ENST00000347545 C5orf38Q86SI9 138 aa10.1□□□□□ -0.79
ARHGEF1-202ENST00000347545 TRACP01848 142 aa10.1□□□□□ -0.79
ARHGEF1-202ENST00000347545 LINC00959A0A1B0GUT2 108 aa10.1□□□□□ -0.79
ARHGEF1-202ENST00000347545 RPL28P46779 137 aaKnown RBP10.1□□□□□ -0.79
ARHGEF1-202ENST00000347545 CCL18P55774 89 aa10.1□□□□□ -0.79
ARHGEF1-202ENST00000347545 KIR2DL5BQ8NHK3 375 aa10.1□□□□□ -0.79
ARHGEF1-202ENST00000347545 SMCR5Q8TEV8 140 aa10.1□□□□□ -0.79
ARHGEF1-202ENST00000347545 SND1-IT1Q9HBX3 110 aa10.1□□□□□ -0.79
ARHGEF1-202ENST00000347545 X6R8D5 127 aa10.1□□□□□ -0.79
ARHGEF1-202ENST00000347545 NBEAL2Q6ZNJ1 2754 aa10.1□□□□□ -0.79
ARHGEF1-202ENST00000347545 MRPL23Q16540 153 aaKnown RBP10.09□□□□□ -0.79
ARHGEF1-202ENST00000347545 FAM222AQ5U5X8 452 aa10.09□□□□□ -0.79
ARHGEF1-202ENST00000347545 LINC00482Q8N8I6 264 aa10.09□□□□□ -0.79
ARHGEF1-202ENST00000347545 FN1P02751 2386 aaKnown RBP10.08□□□□□ -0.8
ARHGEF1-202ENST00000347545 GYPEP15421 78 aa10.08□□□□□ -0.8
ARHGEF1-202ENST00000347545 TRAV13-2A0A0B4J235 113 aa10.08□□□□□ -0.8
ARHGEF1-202ENST00000347545 LINC00158P58513 81 aa10.08□□□□□ -0.8
ARHGEF1-202ENST00000347545 C9orf153Q5TBE3 101 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms