RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 ORAOV1Q8WV07 137 aa9.31□□□□□ -0.92
CDC42-202ENST00000344548 STAB2Q8WWQ8 2551 aa9.31□□□□□ -0.92
CDC42-202ENST00000344548 A0A1B0GUV1 79 aa9.3□□□□□ -0.92
CDC42-202ENST00000344548 SMIM1B2RUZ4 78 aa9.3□□□□□ -0.92
CDC42-202ENST00000344548 LYPD5Q6UWN5 251 aa9.3□□□□□ -0.92
CDC42-202ENST00000344548 TAX1BP3O14907 124 aa9.3□□□□□ -0.92
CDC42-202ENST00000344548 DEFB131BA0A096LNP1 70 aa9.29□□□□□ -0.92
CDC42-202ENST00000344548 LINC00959A0A1B0GUT2 108 aa9.29□□□□□ -0.92
CDC42-202ENST00000344548 CEND1Q8N111 149 aa9.29□□□□□ -0.92
CDC42-202ENST00000344548 SMAGPQ0VAQ4 97 aa9.29□□□□□ -0.92
CDC42-202ENST00000344548 LINC00269Q8N2A0 174 aa9.29□□□□□ -0.92
CDC42-202ENST00000344548 HIST1H4GQ99525 98 aa9.29□□□□□ -0.92
CDC42-202ENST00000344548 IGLV5-39A0A0G2JS06 123 aa9.28□□□□□ -0.92
CDC42-202ENST00000344548 LELP1Q5T871 98 aa9.28□□□□□ -0.92
CDC42-202ENST00000344548 TM2D2Q9BX73 214 aa9.28□□□□□ -0.92
CDC42-202ENST00000344548 IGHV3OR16-9A0A0B4J2B5 98 aa9.28□□□□□ -0.92
CDC42-202ENST00000344548 K7ERJ3 54 aa9.28□□□□□ -0.92
CDC42-202ENST00000344548 A0A0J9YXY3 114 aa9.27□□□□□ -0.93
CDC42-202ENST00000344548 NDUFA12Q9UI09 145 aa9.27□□□□□ -0.93
CDC42-202ENST00000344548 H3BRM9 83 aa9.26□□□□□ -0.93
CDC42-202ENST00000344548 SEC11AP67812 179 aa9.26□□□□□ -0.93
CDC42-202ENST00000344548 C5orf38Q86SI9 138 aa9.26□□□□□ -0.93
CDC42-202ENST00000344548 ANGP03950 147 aaKnown RBP9.26□□□□□ -0.93
CDC42-202ENST00000344548 XCL1P47992 114 aa9.26□□□□□ -0.93
CDC42-202ENST00000344548 ESRGQ1W209 222 aa9.26□□□□□ -0.93
CDC42-202ENST00000344548 ADAMTSL4-AS1Q5T5F5 129 aa9.26□□□□□ -0.93
CDC42-202ENST00000344548 ZFAND6Q6FIF0 208 aa9.26□□□□□ -0.93
CDC42-202ENST00000344548 WFDC10BQ8IUB3 73 aa9.26□□□□□ -0.93
CDC42-202ENST00000344548 NAA38Q9BRA0 125 aaKnown RBP9.26□□□□□ -0.93
CDC42-202ENST00000344548 IGLV10-54A0A075B6I4 117 aa9.25□□□□□ -0.93
CDC42-202ENST00000344548 H3BNG1 76 aa9.25□□□□□ -0.93
CDC42-202ENST00000344548 CCL25O15444 150 aa9.25□□□□□ -0.93
CDC42-202ENST00000344548 LITAFQ99732 161 aa9.25□□□□□ -0.93
CDC42-202ENST00000344548 SRSF9Q13242 221 aaKnown RBP eCLIP9.25□□□□□ -0.93
CDC42-202ENST00000344548 RAB37Q96AX2 223 aa9.25□□□□□ -0.93
CDC42-202ENST00000344548 ZNF625Q96I27 306 aaPredicted RBP9.25□□□□□ -0.93
CDC42-202ENST00000344548 TAL2Q16559 108 aa9.24□□□□□ -0.93
CDC42-202ENST00000344548 NHP2Q9NX24 153 aaKnown RBP9.24□□□□□ -0.93
CDC42-202ENST00000344548 COX11Q9Y6N1 276 aa9.24□□□□□ -0.93
CDC42-202ENST00000344548 TMEM238LA0A1B0GVL6 79 aa9.24□□□□□ -0.93
CDC42-202ENST00000344548 IGHV3-30P01768 117 aa9.24□□□□□ -0.93
CDC42-202ENST00000344548 IGHV3-30-5P0DP03 117 aa9.24□□□□□ -0.93
CDC42-202ENST00000344548 PTTG1IPP53801 180 aa9.24□□□□□ -0.93
CDC42-202ENST00000344548 REG3AQ06141 175 aa9.24□□□□□ -0.93
CDC42-202ENST00000344548 SH2D6Q7Z4S9 175 aa9.24□□□□□ -0.93
CDC42-202ENST00000344548 PRKDCP78527 4128 aaKnown RBP9.23□□□□□ -0.93
CDC42-202ENST00000344548 EIF4EBP3O60516 100 aaPredicted RBP9.23□□□□□ -0.93
CDC42-202ENST00000344548 IGHV3-33P01772 117 aa9.23□□□□□ -0.93
CDC42-202ENST00000344548 Q9H8V8 135 aa9.23□□□□□ -0.93
CDC42-202ENST00000344548 KLK12Q9UKR0 248 aa9.22□□□□□ -0.93
CDC42-202ENST00000344548 A0A087WZ39 114 aa9.22□□□□□ -0.93
CDC42-202ENST00000344548 DAND5Q8N907 189 aa9.22□□□□□ -0.93
CDC42-202ENST00000344548 SPANXB1Q9NS25 103 aaPredicted RBP9.22□□□□□ -0.93
CDC42-202ENST00000344548 MEGF8Q7Z7M0 2845 aa9.21□□□□□ -0.93
CDC42-202ENST00000344548 A0A0U1RRA0 63 aa9.21□□□□□ -0.94
CDC42-202ENST00000344548 A6NDN8 102 aa9.21□□□□□ -0.94
CDC42-202ENST00000344548 NDUFA1O15239 70 aa9.21□□□□□ -0.94
CDC42-202ENST00000344548 ENHOQ6UWT2 76 aa9.21□□□□□ -0.94
CDC42-202ENST00000344548 TOMM7Q9P0U1 55 aa9.21□□□□□ -0.94
CDC42-202ENST00000344548 SS18Q15532 418 aa9.2□□□□□ -0.94
CDC42-202ENST00000344548 CHCHD10Q8WYQ3 142 aaPredicted RBP9.2□□□□□ -0.94
CDC42-202ENST00000344548 NPC2P61916 151 aa9.2□□□□□ -0.94
CDC42-202ENST00000344548 MUSTN1Q8IVN3 82 aa9.2□□□□□ -0.94
CDC42-202ENST00000344548 TRAV10A0A0B4J240 114 aa9.19□□□□□ -0.94
CDC42-202ENST00000344548 PRR34Q9NV39 138 aa9.19□□□□□ -0.94
CDC42-202ENST00000344548 B9D2Q9BPU9 175 aa9.19□□□□□ -0.94
CDC42-202ENST00000344548 H3BUT2 72 aa9.18□□□□□ -0.94
CDC42-202ENST00000344548 SMIM13P0DJ93 91 aa9.18□□□□□ -0.94
CDC42-202ENST00000344548 COX7B2Q8TF08 81 aa9.18□□□□□ -0.94
CDC42-202ENST00000344548 LYSTQ99698 3801 aa9.18□□□□□ -0.94
CDC42-202ENST00000344548 CSMD3Q7Z407 3707 aa9.17□□□□□ -0.94
CDC42-202ENST00000344548 A0A1B0GWB2 263 aa9.17□□□□□ -0.94
CDC42-202ENST00000344548 A4D1N5 150 aa9.16□□□□□ -0.94
CDC42-202ENST00000344548 C9orf118A6NHY6 69 aa9.16□□□□□ -0.94
CDC42-202ENST00000344548 APOMO95445 188 aa9.16□□□□□ -0.94
CDC42-202ENST00000344548 PRSS2P07478 247 aa9.16□□□□□ -0.94
CDC42-202ENST00000344548 CFC1BP0CG36 223 aa9.16□□□□□ -0.94
CDC42-202ENST00000344548 CFC1P0CG37 223 aa9.16□□□□□ -0.94
CDC42-202ENST00000344548 FOXI1Q12951 378 aa9.16□□□□□ -0.94
CDC42-202ENST00000344548 CD164L2Q6UWJ8 174 aa9.16□□□□□ -0.94
CDC42-202ENST00000344548 UBE2WQ96B02 151 aa9.16□□□□□ -0.94
CDC42-202ENST00000344548 IGLL5B9A064 214 aa9.16□□□□□ -0.94
CDC42-202ENST00000344548 TMEM238C9JI98 176 aa9.16□□□□□ -0.94
CDC42-202ENST00000344548 C2orf82Q6UX34 121 aa9.15□□□□□ -0.94
CDC42-202ENST00000344548 LINC00588Q9Y4M8 146 aa9.15□□□□□ -0.94
CDC42-202ENST00000344548 GAGE12HA6NDE8 117 aa9.14□□□□□ -0.95
CDC42-202ENST00000344548 MIAQ16674 131 aa9.14□□□□□ -0.95
CDC42-202ENST00000344548 SOSTDC1Q6X4U4 206 aa9.14□□□□□ -0.95
CDC42-202ENST00000344548 SPANXDQ9BXN6 97 aa9.14□□□□□ -0.95
CDC42-202ENST00000344548 SPANXCQ9NY87 97 aa9.14□□□□□ -0.95
CDC42-202ENST00000344548 KIAA0087Q14695 138 aa9.14□□□□□ -0.95
CDC42-202ENST00000344548 LINC00526Q96FQ7 95 aa9.14□□□□□ -0.95
CDC42-202ENST00000344548 COX7A2LO14548 114 aa9.13□□□□□ -0.95
CDC42-202ENST00000344548 VAMP3Q15836 100 aa9.13□□□□□ -0.95
CDC42-202ENST00000344548 TENM2Q9NT68 2774 aa9.13□□□□□ -0.95
CDC42-202ENST00000344548 KRTAP26-1Q6PEX3 210 aa9.12□□□□□ -0.95
CDC42-202ENST00000344548 TIMM17BO60830 172 aa9.12□□□□□ -0.95
CDC42-202ENST00000344548 MEIG1Q5JSS6 88 aa9.12□□□□□ -0.95
CDC42-202ENST00000344548 C6orf226Q5I0X4 101 aa9.11□□□□□ -0.95
CDC42-202ENST00000344548 SFTA2Q6UW10 78 aa9.11□□□□□ -0.95
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