RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 TRAV13-1A0A0B4J241 112 aa10.34□□□□□ -0.75
TDP2-201ENST00000341060 LY6G6DO95868 133 aa10.34□□□□□ -0.75
TDP2-201ENST00000341060 COX6CP09669 75 aa10.34□□□□□ -0.75
TDP2-201ENST00000341060 TRBV10-2A0A0K0K1G8 114 aa10.33□□□□□ -0.76
TDP2-201ENST00000341060 CIDEAO60543 219 aa10.33□□□□□ -0.76
TDP2-201ENST00000341060 CSNK1G2-AS1Q8NCQ2 148 aa10.33□□□□□ -0.76
TDP2-201ENST00000341060 NSD1Q96L73 2696 aaPredicted RBP10.33□□□□□ -0.76
TDP2-201ENST00000341060 TRGV2A0A075B6R0 118 aa10.33□□□□□ -0.76
TDP2-201ENST00000341060 F5H768 121 aa10.33□□□□□ -0.76
TDP2-201ENST00000341060 TMEM243Q9BU79 118 aa10.33□□□□□ -0.76
TDP2-201ENST00000341060 TRBV6-4A0A1B0GX49 114 aa10.32□□□□□ -0.76
TDP2-201ENST00000341060 UBE2L6O14933 153 aa10.32□□□□□ -0.76
TDP2-201ENST00000341060 GAGE7O76087 117 aa10.32□□□□□ -0.76
TDP2-201ENST00000341060 GAGE12FP0CL80 117 aa10.32□□□□□ -0.76
TDP2-201ENST00000341060 GAGE12GP0CL81 117 aa10.32□□□□□ -0.76
TDP2-201ENST00000341060 GAGE12IP0CL82 117 aa10.32□□□□□ -0.76
TDP2-201ENST00000341060 RPL35AP18077 110 aaKnown RBP10.32□□□□□ -0.76
TDP2-201ENST00000341060 RPL13AP40429 203 aaKnown RBP10.32□□□□□ -0.76
TDP2-201ENST00000341060 LINC00308Q8TCZ7 52 aa10.32□□□□□ -0.76
TDP2-201ENST00000341060 OVOL2Q9BRP0 275 aa10.32□□□□□ -0.76
TDP2-201ENST00000341060 XGP55808 180 aa10.31□□□□□ -0.76
TDP2-201ENST00000341060 ZNF625Q96I27 306 aaPredicted RBP10.31□□□□□ -0.76
TDP2-201ENST00000341060 TMEM262E9PQX1 116 aa10.31□□□□□ -0.76
TDP2-201ENST00000341060 H7C423 109 aa10.31□□□□□ -0.76
TDP2-201ENST00000341060 NTN5Q8WTR8 489 aaPredicted RBP10.31□□□□□ -0.76
TDP2-201ENST00000341060 C2CD3Q4AC94 2353 aa10.31□□□□□ -0.76
TDP2-201ENST00000341060 COPS9Q8WXC6 57 aa10.3□□□□□ -0.76
TDP2-201ENST00000341060 LOC100131303A0A0U1RQF7 123 aa10.3□□□□□ -0.76
TDP2-201ENST00000341060 LST1O00453 97 aa10.3□□□□□ -0.76
TDP2-201ENST00000341060 MT-ATP8P03928 68 aa10.3□□□□□ -0.76
TDP2-201ENST00000341060 PRIMA1Q86XR5 153 aa10.3□□□□□ -0.76
TDP2-201ENST00000341060 HILS1P60008 231 aa10.28□□□□□ -0.76
TDP2-201ENST00000341060 HERV-K104P63124 156 aa10.28□□□□□ -0.76
TDP2-201ENST00000341060 CLEC2BQ92478 149 aa10.28□□□□□ -0.76
TDP2-201ENST00000341060 TRGV4A0A0C4DH28 118 aa10.28□□□□□ -0.76
TDP2-201ENST00000341060 H3BT86 120 aa10.28□□□□□ -0.76
TDP2-201ENST00000341060 TEX49A0A1B0GTD5 131 aa10.27□□□□□ -0.77
TDP2-201ENST00000341060 INAFM1C9JVW0 142 aa10.27□□□□□ -0.77
TDP2-201ENST00000341060 SOSTDC1Q6X4U4 206 aa10.27□□□□□ -0.77
TDP2-201ENST00000341060 F8P00451 2351 aa10.27□□□□□ -0.77
TDP2-201ENST00000341060 A0A0U1RRA0 63 aa10.27□□□□□ -0.77
TDP2-201ENST00000341060 MEIG1Q5JSS6 88 aa10.27□□□□□ -0.77
TDP2-201ENST00000341060 C2orf82Q6UX34 121 aa10.27□□□□□ -0.77
TDP2-201ENST00000341060 PPDPFQ9H3Y8 114 aa10.27□□□□□ -0.77
TDP2-201ENST00000341060 A0A1B0GV72 72 aa10.26□□□□□ -0.77
TDP2-201ENST00000341060 FHL2Q14192 279 aa10.26□□□□□ -0.77
TDP2-201ENST00000341060 UBE2WQ96B02 151 aa10.26□□□□□ -0.77
TDP2-201ENST00000341060 FN1P02751 2386 aaKnown RBP10.26□□□□□ -0.77
TDP2-201ENST00000341060 TRBV6-8A0A0A6YYG3 113 aa10.24□□□□□ -0.77
TDP2-201ENST00000341060 CYSRT1A8MQ03 144 aa10.24□□□□□ -0.77
TDP2-201ENST00000341060 SHISA2Q6UWI4 295 aa10.24□□□□□ -0.77
TDP2-201ENST00000341060 GAGE6Q13070 117 aa10.23□□□□□ -0.77
TDP2-201ENST00000341060 COX7A2LO14548 114 aa10.22□□□□□ -0.77
TDP2-201ENST00000341060 TEP1Q99973 2627 aaKnown RBP10.22□□□□□ -0.77
TDP2-201ENST00000341060 IGLV4-60A0A075B6I1 120 aa10.22□□□□□ -0.77
TDP2-201ENST00000341060 CKS1BP61024 79 aa10.22□□□□□ -0.77
TDP2-201ENST00000341060 COX7B2Q8TF08 81 aa10.22□□□□□ -0.77
TDP2-201ENST00000341060 KIR2DL5BQ8NHK3 375 aa10.21□□□□□ -0.77
TDP2-201ENST00000341060 CHCHD5Q9BSY4 110 aa10.21□□□□□ -0.78
TDP2-201ENST00000341060 TRAV8-4A0A0B4J246 113 aa10.2□□□□□ -0.78
TDP2-201ENST00000341060 IGHV3OR16-9A0A0B4J2B5 98 aa10.2□□□□□ -0.78
TDP2-201ENST00000341060 LINC00612Q8N6U2 182 aa10.2□□□□□ -0.78
TDP2-201ENST00000341060 CITED1Q99966 193 aa10.19□□□□□ -0.78
TDP2-201ENST00000341060 IGKV3OR2-268A0A0C4DH90 116 aa10.19□□□□□ -0.78
TDP2-201ENST00000341060 PF4P02776 101 aa10.18□□□□□ -0.78
TDP2-201ENST00000341060 KRTAP10-3P60369 221 aa10.18□□□□□ -0.78
TDP2-201ENST00000341060 DEFB121Q5J5C9 76 aa10.18□□□□□ -0.78
TDP2-201ENST00000341060 LINC00482Q8N8I6 264 aa10.18□□□□□ -0.78
TDP2-201ENST00000341060 A0A087WZ39 114 aa10.18□□□□□ -0.78
TDP2-201ENST00000341060 CRLF1O75462 422 aa10.18□□□□□ -0.78
TDP2-201ENST00000341060 DEFB130BP0DP73 79 aa10.18□□□□□ -0.78
TDP2-201ENST00000341060 DEFB130AP0DP74 79 aa10.18□□□□□ -0.78
TDP2-201ENST00000341060 TOMM7Q9P0U1 55 aa10.18□□□□□ -0.78
TDP2-201ENST00000341060 FAM222AQ5U5X8 452 aa10.17□□□□□ -0.78
TDP2-201ENST00000341060 MIR7-3HGQ8N6C7 128 aa10.17□□□□□ -0.78
TDP2-201ENST00000341060 MAST4O15021 2626 aa10.17□□□□□ -0.78
TDP2-201ENST00000341060 FAM240AA0A1B0GVK7 77 aa10.16□□□□□ -0.78
TDP2-201ENST00000341060 SNCGO76070 127 aa10.16□□□□□ -0.78
TDP2-201ENST00000341060 TRAV13-2A0A0B4J235 113 aa10.16□□□□□ -0.78
TDP2-201ENST00000341060 TRACP01848 142 aa10.15□□□□□ -0.78
TDP2-201ENST00000341060 X6R8D5 127 aa10.15□□□□□ -0.78
TDP2-201ENST00000341060 LINC00959A0A1B0GUT2 108 aa10.14□□□□□ -0.79
TDP2-201ENST00000341060 CRPP02741 224 aa10.14□□□□□ -0.79
TDP2-201ENST00000341060 GYPEP15421 78 aa10.14□□□□□ -0.79
TDP2-201ENST00000341060 SND1-IT1Q9HBX3 110 aa10.14□□□□□ -0.79
TDP2-201ENST00000341060 SMIM9A6NGZ8 99 aa10.13□□□□□ -0.79
TDP2-201ENST00000341060 IBA57-AS1B1ANH7 110 aa10.13□□□□□ -0.79
TDP2-201ENST00000341060 RPL28P46779 137 aaKnown RBP10.13□□□□□ -0.79
TDP2-201ENST00000341060 LINC00337Q8N6G1 96 aa10.13□□□□□ -0.79
TDP2-201ENST00000341060 IGKV2-28A0A075B6P5 120 aa10.13□□□□□ -0.79
TDP2-201ENST00000341060 A0A1B0GUV1 79 aa10.13□□□□□ -0.79
TDP2-201ENST00000341060 IGKV2D-28P01615 120 aa10.13□□□□□ -0.79
TDP2-201ENST00000341060 LINC00158P58513 81 aa10.12□□□□□ -0.79
TDP2-201ENST00000341060 C5orf38Q86SI9 138 aa10.12□□□□□ -0.79
TDP2-201ENST00000341060 VWFP04275 2813 aa10.12□□□□□ -0.79
TDP2-201ENST00000341060 FAM218AQ96MZ4 157 aa10.12□□□□□ -0.79
TDP2-201ENST00000341060 PRO0255Q9UI72 69 aa10.12□□□□□ -0.79
TDP2-201ENST00000341060 TENM1Q9UKZ4 2725 aa10.11□□□□□ -0.79
TDP2-201ENST00000341060 GAGE2BQ13066 116 aa10.11□□□□□ -0.79
TDP2-201ENST00000341060 MRPL23Q16540 153 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms