RNA–Protein interactions for RNA: ENST00000340857.3

H1F0-201, Transcript of H1 histone family member 0, humanhuman

APPRIS P1 BASIC

Gene H1F0, Length 2,344 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H1F0-201ENST00000340857 TRGV1A0A0A0MS02 117 aa11.65□□□□□ -0.54
H1F0-201ENST00000340857 FAM19A3Q7Z5A8 133 aa11.65□□□□□ -0.54
H1F0-201ENST00000340857 LINC00308Q8TCZ7 52 aa11.65□□□□□ -0.54
H1F0-201ENST00000340857 A0A1W2PRX2 142 aa11.64□□□□□ -0.55
H1F0-201ENST00000340857 NDUFA7O95182 113 aa11.64□□□□□ -0.55
H1F0-201ENST00000340857 TRAV4A0A0B4J268 109 aa11.64□□□□□ -0.55
H1F0-201ENST00000340857 SNCGO76070 127 aa11.64□□□□□ -0.55
H1F0-201ENST00000340857 SMIM1B2RUZ4 78 aa11.63□□□□□ -0.55
H1F0-201ENST00000340857 NTM-AS1Q6ZSK4 140 aa11.63□□□□□ -0.55
H1F0-201ENST00000340857 C11orf44Q8N8P7 122 aa11.63□□□□□ -0.55
H1F0-201ENST00000340857 CSDC2Q9Y534 153 aaKnown RBP11.63□□□□□ -0.55
H1F0-201ENST00000340857 ZNF625Q96I27 306 aaPredicted RBP11.63□□□□□ -0.55
H1F0-201ENST00000340857 ANAPC13Q9BS18 74 aa11.63□□□□□ -0.55
H1F0-201ENST00000340857 RPL36AP83881 106 aaKnown RBP11.62□□□□□ -0.55
H1F0-201ENST00000340857 RPL36ALQ969Q0 106 aaKnown RBP11.62□□□□□ -0.55
H1F0-201ENST00000340857 C16orf95Q9H693 158 aa11.62□□□□□ -0.55
H1F0-201ENST00000340857 TRBV10-1A0A0K0K1A3 114 aa11.61□□□□□ -0.55
H1F0-201ENST00000340857 K7EQD1 137 aa11.61□□□□□ -0.55
H1F0-201ENST00000340857 CCL24O00175 119 aa11.61□□□□□ -0.55
H1F0-201ENST00000340857 GAGE2BQ13066 116 aa11.61□□□□□ -0.55
H1F0-201ENST00000340857 GAGE2EQ4V326 116 aa11.61□□□□□ -0.55
H1F0-201ENST00000340857 GAGE2DQ9UEU5 116 aa11.61□□□□□ -0.55
H1F0-201ENST00000340857 TRAV13-1A0A0B4J241 112 aa11.61□□□□□ -0.55
H1F0-201ENST00000340857 DAZ2Q13117 558 aaKnown RBP11.61□□□□□ -0.55
H1F0-201ENST00000340857 Q6ZTI0 123 aa11.61□□□□□ -0.55
H1F0-201ENST00000340857 DAZ4Q86SG3 579 aaKnown RBP11.61□□□□□ -0.55
H1F0-201ENST00000340857 DAZ3Q9NR90 486 aaKnown RBP11.61□□□□□ -0.55
H1F0-201ENST00000340857 A0A0U1RRA0 63 aa11.6□□□□□ -0.55
H1F0-201ENST00000340857 DEFB121Q5J5C9 76 aa11.6□□□□□ -0.55
H1F0-201ENST00000340857 SOSTDC1Q6X4U4 206 aa11.6□□□□□ -0.55
H1F0-201ENST00000340857 CDC42SE2Q9NRR3 84 aa11.59□□□□□ -0.55
H1F0-201ENST00000340857 TENM1Q9UKZ4 2725 aa11.59□□□□□ -0.55
H1F0-201ENST00000340857 F5H768 121 aa11.59□□□□□ -0.55
H1F0-201ENST00000340857 C15orf53Q8NAA6 179 aa11.59□□□□□ -0.55
H1F0-201ENST00000340857 NHLRC4P0CG21 123 aaPredicted RBP11.58□□□□□ -0.56
H1F0-201ENST00000340857 KRTAP24-1Q3LI83 254 aa11.58□□□□□ -0.56
H1F0-201ENST00000340857 Q6Q795 121 aa11.58□□□□□ -0.56
H1F0-201ENST00000340857 GAGE12JA6NER3 117 aa11.57□□□□□ -0.56
H1F0-201ENST00000340857 GAGE4Q13068 117 aa11.57□□□□□ -0.56
H1F0-201ENST00000340857 GAGE5Q13069 117 aa11.57□□□□□ -0.56
H1F0-201ENST00000340857 COPS9Q8WXC6 57 aa11.57□□□□□ -0.56
H1F0-201ENST00000340857 NDUFV3P56181 108 aaKnown RBP11.57□□□□□ -0.56
H1F0-201ENST00000340857 KRTAP10-3P60369 221 aa11.57□□□□□ -0.56
H1F0-201ENST00000340857 SHISA2Q6UWI4 295 aa11.57□□□□□ -0.56
H1F0-201ENST00000340857 FAM240AA0A1B0GVK7 77 aa11.56□□□□□ -0.56
H1F0-201ENST00000340857 COX7A2LO14548 114 aa11.56□□□□□ -0.56
H1F0-201ENST00000340857 MEIG1Q5JSS6 88 aa11.56□□□□□ -0.56
H1F0-201ENST00000340857 NOP10Q9NPE3 64 aaKnown RBP11.55□□□□□ -0.56
H1F0-201ENST00000340857 CMC4P56277 68 aaPredicted RBP11.55□□□□□ -0.56
H1F0-201ENST00000340857 HERV-K104P63124 156 aa11.54□□□□□ -0.56
H1F0-201ENST00000340857 MRPL23Q16540 153 aaKnown RBP11.54□□□□□ -0.56
H1F0-201ENST00000340857 WNK1Q9H4A3 2382 aa11.54□□□□□ -0.56
H1F0-201ENST00000340857 GIG44P09565 113 aaPredicted RBP11.53□□□□□ -0.56
H1F0-201ENST00000340857 TMEM243Q9BU79 118 aa11.53□□□□□ -0.56
H1F0-201ENST00000340857 TTC32Q5I0X7 151 aa11.53□□□□□ -0.56
H1F0-201ENST00000340857 PLAC8L1A1L4L8 177 aa11.52□□□□□ -0.57
H1F0-201ENST00000340857 UBE2L6O14933 153 aa11.52□□□□□ -0.57
H1F0-201ENST00000340857 PPDPFQ9H3Y8 114 aa11.52□□□□□ -0.57
H1F0-201ENST00000340857 TRRAPQ9Y4A5 3859 aa11.51□□□□□ -0.57
H1F0-201ENST00000340857 GAGE6Q13070 117 aa11.51□□□□□ -0.57
H1F0-201ENST00000340857 C16orf74Q96GX8 76 aa11.51□□□□□ -0.57
H1F0-201ENST00000340857 COL6A5A8TX70 2615 aa11.5□□□□□ -0.57
H1F0-201ENST00000340857 LOC100131303A0A0U1RQF7 123 aa11.5□□□□□ -0.57
H1F0-201ENST00000340857 TRGV2A0A075B6R0 118 aa11.49□□□□□ -0.57
H1F0-201ENST00000340857 GAGE7O76087 117 aa11.49□□□□□ -0.57
H1F0-201ENST00000340857 GAGE12FP0CL80 117 aa11.49□□□□□ -0.57
H1F0-201ENST00000340857 GAGE12GP0CL81 117 aa11.49□□□□□ -0.57
H1F0-201ENST00000340857 GAGE12IP0CL82 117 aa11.49□□□□□ -0.57
H1F0-201ENST00000340857 NOTCH3Q9UM47 2321 aa11.49□□□□□ -0.57
H1F0-201ENST00000340857 TRACP01848 142 aa11.48□□□□□ -0.57
H1F0-201ENST00000340857 RPL35AP18077 110 aaKnown RBP11.48□□□□□ -0.57
H1F0-201ENST00000340857 TRBV6-4A0A1B0GX49 114 aa11.47□□□□□ -0.57
H1F0-201ENST00000340857 WFDC10AQ9H1F0 79 aa11.47□□□□□ -0.57
H1F0-201ENST00000340857 COX7B2Q8TF08 81 aa11.47□□□□□ -0.57
H1F0-201ENST00000340857 FAM218AQ96MZ4 157 aa11.47□□□□□ -0.57
H1F0-201ENST00000340857 STAB1Q9NY15 2570 aa11.46□□□□□ -0.57
H1F0-201ENST00000340857 FAM110AQ9BQ89 295 aa11.46□□□□□ -0.57
H1F0-201ENST00000340857 B5MCH6 92 aa11.45□□□□□ -0.58
H1F0-201ENST00000340857 IGLV1-51P01701 117 aa11.45□□□□□ -0.58
H1F0-201ENST00000340857 ACYP1P07311 99 aa11.45□□□□□ -0.58
H1F0-201ENST00000340857 BAALC-AS2P0C853 105 aa11.45□□□□□ -0.58
H1F0-201ENST00000340857 OVOL2Q9BRP0 275 aa11.45□□□□□ -0.58
H1F0-201ENST00000340857 TRAV13-2A0A0B4J235 113 aa11.44□□□□□ -0.58
H1F0-201ENST00000340857 TRGV4A0A0C4DH28 118 aa11.44□□□□□ -0.58
H1F0-201ENST00000340857 TRBV7-7A0A0K0K1E9 115 aa11.44□□□□□ -0.58
H1F0-201ENST00000340857 PF4P02776 101 aa11.44□□□□□ -0.58
H1F0-201ENST00000340857 MIR7-3HGQ8N6C7 128 aa11.44□□□□□ -0.58
H1F0-201ENST00000340857 C19orf73Q9NVV2 129 aa11.44□□□□□ -0.58
H1F0-201ENST00000340857 C22orf24Q9Y442 160 aa11.44□□□□□ -0.58
H1F0-201ENST00000340857 VWFP04275 2813 aa11.44□□□□□ -0.58
H1F0-201ENST00000340857 CCDC179H3BU77 68 aa11.44□□□□□ -0.58
H1F0-201ENST00000340857 CSNK1G2-AS1Q8NCQ2 148 aa11.44□□□□□ -0.58
H1F0-201ENST00000340857 IGLV4-60A0A075B6I1 120 aa11.43□□□□□ -0.58
H1F0-201ENST00000340857 RPL28P46779 137 aaKnown RBP11.43□□□□□ -0.58
H1F0-201ENST00000340857 FAM222AQ5U5X8 452 aa11.43□□□□□ -0.58
H1F0-201ENST00000340857 LINC00337Q8N6G1 96 aa11.43□□□□□ -0.58
H1F0-201ENST00000340857 TOMM7Q9P0U1 55 aa11.43□□□□□ -0.58
H1F0-201ENST00000340857 IGKV2-28A0A075B6P5 120 aa11.42□□□□□ -0.58
H1F0-201ENST00000340857 IGKV3OR2-268A0A0C4DH90 116 aa11.42□□□□□ -0.58
H1F0-201ENST00000340857 IGKV2D-28P01615 120 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms