RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 TRGV3P03979 118 aa12.19□□□□□ -0.46
CDK11B-201ENST00000340677 C9orf129Q5T035 196 aaKnown RBP12.18□□□□□ -0.46
CDK11B-201ENST00000340677 TSHBP01222 138 aa12.18□□□□□ -0.46
CDK11B-201ENST00000340677 OVOL2Q9BRP0 275 aa12.18□□□□□ -0.46
CDK11B-201ENST00000340677 Q8N9W7 124 aa12.17□□□□□ -0.46
CDK11B-201ENST00000340677 PHLDA3Q9Y5J5 127 aa12.17□□□□□ -0.46
CDK11B-201ENST00000340677 LCA10Q71F78 164 aa12.16□□□□□ -0.46
CDK11B-201ENST00000340677 KRTAP1-3Q8IUG1 177 aa12.16□□□□□ -0.46
CDK11B-201ENST00000340677 KLK9Q2XQG4 91 aa12.15□□□□□ -0.46
CDK11B-201ENST00000340677 KLK9Q9UKQ9 250 aa12.15□□□□□ -0.46
CDK11B-201ENST00000340677 IGHV4-31P0DP07 118 aa12.15□□□□□ -0.46
CDK11B-201ENST00000340677 SYCNQ0VAF6 134 aa12.15□□□□□ -0.46
CDK11B-201ENST00000340677 IGHV3-64A0A075B6Q5 118 aa12.14□□□□□ -0.47
CDK11B-201ENST00000340677 IGHV4-38-2P0DP08 117 aa12.14□□□□□ -0.47
CDK11B-201ENST00000340677 OPRPNQ99935 248 aaPredicted RBP12.14□□□□□ -0.47
CDK11B-201ENST00000340677 RNF223E7ERA6 249 aa12.14□□□□□ -0.47
CDK11B-201ENST00000340677 M0R381 172 aa12.14□□□□□ -0.47
CDK11B-201ENST00000340677 VCYO14598 125 aa12.14□□□□□ -0.47
CDK11B-201ENST00000340677 CLEC19AQ6UXS0 136 aa12.14□□□□□ -0.47
CDK11B-201ENST00000340677 LYRM9A8MSI8 78 aa12.13□□□□□ -0.47
CDK11B-201ENST00000340677 UTP20O75691 2785 aaKnown RBP12.13□□□□□ -0.47
CDK11B-201ENST00000340677 FBN2P35556 2912 aa12.13□□□□□ -0.47
CDK11B-201ENST00000340677 IGHV7-81A0A0B4J1V7 117 aa12.13□□□□□ -0.47
CDK11B-201ENST00000340677 FSHBP01225 129 aa12.13□□□□□ -0.47
CDK11B-201ENST00000340677 ESM1Q9NQ30 184 aa12.13□□□□□ -0.47
CDK11B-201ENST00000340677 FAM218AQ96MZ4 157 aa12.12□□□□□ -0.47
CDK11B-201ENST00000340677 TRBV10-3A0A0K0K1G6 114 aa12.12□□□□□ -0.47
CDK11B-201ENST00000340677 MIAQ16674 131 aa12.12□□□□□ -0.47
CDK11B-201ENST00000340677 C5orf56Q8N8D9 126 aa12.12□□□□□ -0.47
CDK11B-201ENST00000340677 Q9HAA7 133 aa12.12□□□□□ -0.47
CDK11B-201ENST00000340677 TRAV10A0A0B4J240 114 aa12.11□□□□□ -0.47
CDK11B-201ENST00000340677 A6NN06 94 aa12.11□□□□□ -0.47
CDK11B-201ENST00000340677 BRD3OSQ6XYD6 125 aa12.11□□□□□ -0.47
CDK11B-201ENST00000340677 I3L2K1 104 aa12.11□□□□□ -0.47
CDK11B-201ENST00000340677 Q6ZTC4 211 aa12.11□□□□□ -0.47
CDK11B-201ENST00000340677 OBSCN-AS1Q96MR7 158 aa12.11□□□□□ -0.47
CDK11B-201ENST00000340677 TRAV22A0A0B4J277 110 aa12.1□□□□□ -0.47
CDK11B-201ENST00000340677 TRBV7-4A0A0J9YYF1 115 aa12.1□□□□□ -0.47
CDK11B-201ENST00000340677 A6NDX4 124 aa12.1□□□□□ -0.47
CDK11B-201ENST00000340677 S4R3C0 116 aa12.1□□□□□ -0.47
CDK11B-201ENST00000340677 TEX15Q9BXT5 2789 aa12.1□□□□□ -0.47
CDK11B-201ENST00000340677 LRCOL1A6NCL2 159 aa12.1□□□□□ -0.47
CDK11B-201ENST00000340677 IGLV11-55A0A075B6I3 123 aa12.09□□□□□ -0.47
CDK11B-201ENST00000340677 SUMO2P61956 95 aaKnown RBP12.09□□□□□ -0.47
CDK11B-201ENST00000340677 C7orf65Q6ZTY9 151 aa12.09□□□□□ -0.47
CDK11B-201ENST00000340677 ZNF580Q9UK33 172 aa12.09□□□□□ -0.47
CDK11B-201ENST00000340677 DYNLRB2Q8TF09 96 aa12.09□□□□□ -0.47
CDK11B-201ENST00000340677 TMEM14CQ9P0S9 112 aa12.09□□□□□ -0.47
CDK11B-201ENST00000340677 CRYBG3Q68DQ2 2970 aa12.09□□□□□ -0.47
CDK11B-201ENST00000340677 K7EIM0 57 aa12.08□□□□□ -0.48
CDK11B-201ENST00000340677 DIRC1Q969H9 104 aa12.08□□□□□ -0.48
CDK11B-201ENST00000340677 MYO9AB2RTY4 2548 aa12.08□□□□□ -0.48
CDK11B-201ENST00000340677 TACC2O95359 2948 aa12.08□□□□□ -0.48
CDK11B-201ENST00000340677 SPTSSBQ8NFR3 76 aa12.08□□□□□ -0.48
CDK11B-201ENST00000340677 Q9H8V8 135 aa12.08□□□□□ -0.48
CDK11B-201ENST00000340677 C16orf90A8MZG2 172 aa12.07□□□□□ -0.48
CDK11B-201ENST00000340677 COX8CQ7Z4L0 72 aa12.07□□□□□ -0.48
CDK11B-201ENST00000340677 hDV103S1A0JD37 113 aa12.07□□□□□ -0.48
CDK11B-201ENST00000340677 CD28P10747 220 aa12.07□□□□□ -0.48
CDK11B-201ENST00000340677 LINC00269Q8N2A0 174 aa12.07□□□□□ -0.48
CDK11B-201ENST00000340677 C15orf32Q32M92 178 aa12.06□□□□□ -0.48
CDK11B-201ENST00000340677 IGKV1-17P01599 117 aa12.06□□□□□ -0.48
CDK11B-201ENST00000340677 C19orf54Q5BKX5 351 aa12.06□□□□□ -0.48
CDK11B-201ENST00000340677 PIK3CD-AS1Q5SR53 167 aa12.06□□□□□ -0.48
CDK11B-201ENST00000340677 H3BUX3 64 aa12.05□□□□□ -0.48
CDK11B-201ENST00000340677 ATP6V0E1O15342 81 aa12.05□□□□□ -0.48
CDK11B-201ENST00000340677 APCP25054 2843 aa12.04□□□□□ -0.48
CDK11B-201ENST00000340677 SOCS3O14543 225 aa12.04□□□□□ -0.48
CDK11B-201ENST00000340677 UNC79Q9P2D8 2635 aa12.04□□□□□ -0.48
CDK11B-201ENST00000340677 MAPK1IP1LQ8NDC0 245 aa12.04□□□□□ -0.48
CDK11B-201ENST00000340677 CELSR2Q9HCU4 2923 aa12.04□□□□□ -0.48
CDK11B-201ENST00000340677 IGKV2-40A0A087WW87 121 aaPredicted RBP12.03□□□□□ -0.48
CDK11B-201ENST00000340677 IGKV2D-40P01614 121 aaPredicted RBP12.03□□□□□ -0.48
CDK11B-201ENST00000340677 TMEM254Q8TBM7 123 aa12.03□□□□□ -0.48
CDK11B-201ENST00000340677 H3BRN7 92 aa12.02□□□□□ -0.48
CDK11B-201ENST00000340677 H3BUA1 57 aa12.02□□□□□ -0.48
CDK11B-201ENST00000340677 DEFB112Q30KQ8 113 aa12.02□□□□□ -0.48
CDK11B-201ENST00000340677 ABCA12Q86UK0 2595 aa12.02□□□□□ -0.49
CDK11B-201ENST00000340677 IGFL4Q6B9Z1 124 aa12.02□□□□□ -0.49
CDK11B-201ENST00000340677 Q8TAT8 98 aa12.02□□□□□ -0.49
CDK11B-201ENST00000340677 RPL39LQ96EH5 51 aaKnown RBP12.02□□□□□ -0.49
CDK11B-201ENST00000340677 POLQO75417 2590 aa12.02□□□□□ -0.49
CDK11B-201ENST00000340677 ATP11AUNQ6ZP68 121 aa12.01□□□□□ -0.49
CDK11B-201ENST00000340677 KRTAP21-3Q3LHN1 58 aa12.01□□□□□ -0.49
CDK11B-201ENST00000340677 Q6YL49 198 aa12.01□□□□□ -0.49
CDK11B-201ENST00000340677 LYPD1Q8N2G4 141 aa12.01□□□□□ -0.49
CDK11B-201ENST00000340677 ZNF625Q96I27 306 aaPredicted RBP12.01□□□□□ -0.49
CDK11B-201ENST00000340677 TMEM141Q96I45 108 aa12.01□□□□□ -0.49
CDK11B-201ENST00000340677 CSMD1Q96PZ7 3565 aa12□□□□□ -0.49
CDK11B-201ENST00000340677 GPHB5Q86YW7 130 aa12□□□□□ -0.49
CDK11B-201ENST00000340677 NKAPP1Q8N9T2 125 aa12□□□□□ -0.49
CDK11B-201ENST00000340677 NCR3O14931 201 aa12□□□□□ -0.49
CDK11B-201ENST00000340677 IGHV3-30-3P0DP02 117 aa11.99□□□□□ -0.49
CDK11B-201ENST00000340677 LINC00313P59037 77 aa11.99□□□□□ -0.49
CDK11B-201ENST00000340677 CREBBPQ92793 2442 aa11.99□□□□□ -0.49
CDK11B-201ENST00000340677 CENPEQ02224 2701 aa11.99□□□□□ -0.49
CDK11B-201ENST00000340677 F8W735 103 aaPredicted RBP11.99□□□□□ -0.49
CDK11B-201ENST00000340677 LY6EQ16553 131 aa11.99□□□□□ -0.49
CDK11B-201ENST00000340677 RPL39P62891 51 aaKnown RBP11.98□□□□□ -0.49
CDK11B-201ENST00000340677 IGHV3-23P01764 117 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms