RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 ESRGQ1W209 222 aa14.48□□□□□ -0.09
VRK2-201ENST00000340157 CLPSL2Q6UWE3 100 aa14.48□□□□□ -0.09
VRK2-201ENST00000340157 PLEKHB2Q96CS7 222 aa14.48□□□□□ -0.09
VRK2-201ENST00000340157 LINC00269Q8N2A0 174 aa14.46□□□□□ -0.09
VRK2-201ENST00000340157 SMIM1B2RUZ4 78 aa14.46□□□□□ -0.1
VRK2-201ENST00000340157 H3BRM9 83 aa14.46□□□□□ -0.1
VRK2-201ENST00000340157 LGALS3P17931 250 aaKnown RBP14.46□□□□□ -0.1
VRK2-201ENST00000340157 BVES-AS1Q5T3Y7 98 aa14.46□□□□□ -0.1
VRK2-201ENST00000340157 IGLV5-39A0A0G2JS06 123 aa14.45□□□□□ -0.1
VRK2-201ENST00000340157 ANGP03950 147 aaKnown RBP14.45□□□□□ -0.1
VRK2-201ENST00000340157 WFDC10BQ8IUB3 73 aa14.45□□□□□ -0.1
VRK2-201ENST00000340157 IGHV3OR16-9A0A0B4J2B5 98 aa14.44□□□□□ -0.1
VRK2-201ENST00000340157 HSD52Q0P140 79 aa14.43□□□□□ -0.1
VRK2-201ENST00000340157 REG3AQ06141 175 aa14.42□□□□□ -0.1
VRK2-201ENST00000340157 C10orf126Q8N4M7 172 aa14.42□□□□□ -0.1
VRK2-201ENST00000340157 CCL25O15444 150 aa14.41□□□□□ -0.1
VRK2-201ENST00000340157 LBHQ53QV2 105 aaPredicted RBP14.41□□□□□ -0.1
VRK2-201ENST00000340157 C15orf53Q8NAA6 179 aa14.4□□□□□ -0.1
VRK2-201ENST00000340157 IGHV3-30P01768 117 aa14.4□□□□□ -0.1
VRK2-201ENST00000340157 IGHV3-33P01772 117 aa14.4□□□□□ -0.1
VRK2-201ENST00000340157 IGHV3-30-5P0DP03 117 aa14.4□□□□□ -0.1
VRK2-201ENST00000340157 XCL1P47992 114 aa14.4□□□□□ -0.1
VRK2-201ENST00000340157 SS18Q15532 418 aa14.4□□□□□ -0.1
VRK2-201ENST00000340157 ZFAND6Q6FIF0 208 aa14.4□□□□□ -0.1
VRK2-201ENST00000340157 SCGB1D4Q6XE38 83 aa14.4□□□□□ -0.1
VRK2-201ENST00000340157 PRR34Q9NV39 138 aa14.39□□□□□ -0.11
VRK2-201ENST00000340157 NHLRC4P0CG21 123 aaPredicted RBP14.38□□□□□ -0.11
VRK2-201ENST00000340157 NDUFA12Q9UI09 145 aa14.38□□□□□ -0.11
VRK2-201ENST00000340157 KLK12Q9UKR0 248 aa14.38□□□□□ -0.11
VRK2-201ENST00000340157 A0A087WZ39 114 aa14.38□□□□□ -0.11
VRK2-201ENST00000340157 C5orf38Q86SI9 138 aa14.38□□□□□ -0.11
VRK2-201ENST00000340157 IGLL5B9A064 214 aa14.37□□□□□ -0.11
VRK2-201ENST00000340157 IGLV10-54A0A075B6I4 117 aa14.36□□□□□ -0.11
VRK2-201ENST00000340157 K7EP13 123 aa14.36□□□□□ -0.11
VRK2-201ENST00000340157 ENHOQ6UWT2 76 aa14.36□□□□□ -0.11
VRK2-201ENST00000340157 CSMD3Q7Z407 3707 aa14.36□□□□□ -0.11
VRK2-201ENST00000340157 A0A0J9YXY3 114 aa14.35□□□□□ -0.11
VRK2-201ENST00000340157 CHCHD10Q8WYQ3 142 aaPredicted RBP14.35□□□□□ -0.11
VRK2-201ENST00000340157 DYNC2H1Q8NCM8 4307 aaKnown RBP14.35□□□□□ -0.11
VRK2-201ENST00000340157 FXYD2P54710 66 aa14.35□□□□□ -0.11
VRK2-201ENST00000340157 COL5A1-AS1Q5SY13 56 aa14.35□□□□□ -0.11
VRK2-201ENST00000340157 ORAOV1Q8WV07 137 aa14.35□□□□□ -0.11
VRK2-201ENST00000340157 GCSHP23434 173 aa14.34□□□□□ -0.11
VRK2-201ENST00000340157 TAL2Q16559 108 aa14.34□□□□□ -0.11
VRK2-201ENST00000340157 CEND1Q8N111 149 aa14.34□□□□□ -0.11
VRK2-201ENST00000340157 HIST1H4GQ99525 98 aa14.34□□□□□ -0.11
VRK2-201ENST00000340157 LINC00588Q9Y4M8 146 aa14.34□□□□□ -0.11
VRK2-201ENST00000340157 NDUFA1O15239 70 aa14.33□□□□□ -0.11
VRK2-201ENST00000340157 CD164L2Q6UWJ8 174 aa14.33□□□□□ -0.11
VRK2-201ENST00000340157 TM2D2Q9BX73 214 aa14.33□□□□□ -0.11
VRK2-201ENST00000340157 LITAFQ99732 161 aa14.32□□□□□ -0.12
VRK2-201ENST00000340157 SPANXB1Q9NS25 103 aaPredicted RBP14.32□□□□□ -0.12
VRK2-201ENST00000340157 LINC01556Q5JQF7 62 aa14.31□□□□□ -0.12
VRK2-201ENST00000340157 ZNF625Q96I27 306 aaPredicted RBP14.31□□□□□ -0.12
VRK2-201ENST00000340157 FOXI1Q12951 378 aa14.31□□□□□ -0.12
VRK2-201ENST00000340157 Q9H8V8 135 aa14.31□□□□□ -0.12
VRK2-201ENST00000340157 COX7B2Q8TF08 81 aa14.3□□□□□ -0.12
VRK2-201ENST00000340157 DNAH7Q8WXX0 4024 aa14.3□□□□□ -0.12
VRK2-201ENST00000340157 LYSTQ99698 3801 aa14.3□□□□□ -0.12
VRK2-201ENST00000340157 A0A1B0GV90 55 aa14.29□□□□□ -0.12
VRK2-201ENST00000340157 UBE2WQ96B02 151 aa14.29□□□□□ -0.12
VRK2-201ENST00000340157 DNAH10OSP0CZ25 163 aa14.28□□□□□ -0.12
VRK2-201ENST00000340157 SRSF9Q13242 221 aaKnown RBP eCLIP14.28□□□□□ -0.12
VRK2-201ENST00000340157 Q6ZVH6 145 aa14.28□□□□□ -0.12
VRK2-201ENST00000340157 ADAMTSL4-AS1Q5T5F5 129 aa14.27□□□□□ -0.12
VRK2-201ENST00000340157 LINC01561Q8N1V8 128 aa14.27□□□□□ -0.12
VRK2-201ENST00000340157 TOMM7Q9P0U1 55 aa14.27□□□□□ -0.12
VRK2-201ENST00000340157 GAGE12HA6NDE8 117 aa14.27□□□□□ -0.13
VRK2-201ENST00000340157 COX7A2LO14548 114 aa14.27□□□□□ -0.13
VRK2-201ENST00000340157 CRPP02741 224 aa14.26□□□□□ -0.13
VRK2-201ENST00000340157 CCL18P55774 89 aa14.26□□□□□ -0.13
VRK2-201ENST00000340157 TAX1BP3O14907 124 aa14.25□□□□□ -0.13
VRK2-201ENST00000340157 TMEM238C9JI98 176 aa14.25□□□□□ -0.13
VRK2-201ENST00000340157 KRTAP26-1Q6PEX3 210 aa14.25□□□□□ -0.13
VRK2-201ENST00000340157 APLNQ9ULZ1 77 aa14.25□□□□□ -0.13
VRK2-201ENST00000340157 PTTG1IPP53801 180 aa14.24□□□□□ -0.13
VRK2-201ENST00000340157 FBN3Q75N90 2809 aa14.24□□□□□ -0.13
VRK2-201ENST00000340157 TRAV8-4A0A0B4J246 113 aa14.23□□□□□ -0.13
VRK2-201ENST00000340157 A6NDN8 102 aa14.23□□□□□ -0.13
VRK2-201ENST00000340157 MIAQ16674 131 aa14.23□□□□□ -0.13
VRK2-201ENST00000340157 TIMM17BO60830 172 aa14.23□□□□□ -0.13
VRK2-201ENST00000340157 UPK3BQ9BT76 320 aa14.23□□□□□ -0.13
VRK2-201ENST00000340157 K7ERJ3 54 aa14.22□□□□□ -0.13
VRK2-201ENST00000340157 KIAA0087Q14695 138 aa14.22□□□□□ -0.13
VRK2-201ENST00000340157 NHP2Q9NX24 153 aaKnown RBP14.22□□□□□ -0.13
VRK2-201ENST00000340157 PLECQ15149 4684 aaKnown RBP14.22□□□□□ -0.13
VRK2-201ENST00000340157 DNAH1Q9P2D7 4330 aa14.21□□□□□ -0.13
VRK2-201ENST00000340157 STARD9Q9P2P6 4700 aa14.21□□□□□ -0.13
VRK2-201ENST00000340157 Q8IZM0 81 aa14.21□□□□□ -0.13
VRK2-201ENST00000340157 SPANXDQ9BXN6 97 aa14.21□□□□□ -0.13
VRK2-201ENST00000340157 SPANXCQ9NY87 97 aa14.21□□□□□ -0.13
VRK2-201ENST00000340157 HERV-K104P63124 156 aa14.21□□□□□ -0.14
VRK2-201ENST00000340157 MUSTN1Q8IVN3 82 aa14.2□□□□□ -0.14
VRK2-201ENST00000340157 DAND5Q8N907 189 aa14.2□□□□□ -0.14
VRK2-201ENST00000340157 MALP21145 153 aa14.19□□□□□ -0.14
VRK2-201ENST00000340157 A0A1B0GWB2 263 aa14.18□□□□□ -0.14
VRK2-201ENST00000340157 EIF4EBP3O60516 100 aaPredicted RBP14.18□□□□□ -0.14
VRK2-201ENST00000340157 TENM2Q9NT68 2774 aa14.18□□□□□ -0.14
VRK2-201ENST00000340157 C6orf226Q5I0X4 101 aa14.18□□□□□ -0.14
VRK2-201ENST00000340157 C2orf82Q6UX34 121 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms