RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 RPS10P5Q9NQ39 176 aa9.68□□□□□ -0.86
PRKN-201ENST00000338468 IGLV4-69A0A075B6H9 119 aa9.67□□□□□ -0.86
PRKN-201ENST00000338468 A0A087WYN8 130 aa9.67□□□□□ -0.86
PRKN-201ENST00000338468 IFITM10A6NMD0 228 aa9.67□□□□□ -0.86
PRKN-201ENST00000338468 ZNF561-AS1K7EIQ3 104 aa9.67□□□□□ -0.86
PRKN-201ENST00000338468 MALP21145 153 aa9.67□□□□□ -0.86
PRKN-201ENST00000338468 CARD19Q96LW7 228 aa9.67□□□□□ -0.86
PRKN-201ENST00000338468 NXT2Q9NPJ8 142 aaKnown RBP9.67□□□□□ -0.86
PRKN-201ENST00000338468 CYSLTR1Q9Y271 337 aa9.67□□□□□ -0.86
PRKN-201ENST00000338468 HMCN2Q8NDA2 5059 aa9.66□□□□□ -0.86
PRKN-201ENST00000338468 A0A096LNI7 61 aa9.66□□□□□ -0.86
PRKN-201ENST00000338468 K7EMI3 77 aa9.66□□□□□ -0.86
PRKN-201ENST00000338468 SYCNQ0VAF6 134 aa9.66□□□□□ -0.86
PRKN-201ENST00000338468 ORMDL2Q53FV1 153 aa9.66□□□□□ -0.86
PRKN-201ENST00000338468 ZC2HC1BQ5TFG8 222 aa9.66□□□□□ -0.86
PRKN-201ENST00000338468 LINC00173Q6ZV60 143 aa9.66□□□□□ -0.86
PRKN-201ENST00000338468 TMEM141Q96I45 108 aa9.66□□□□□ -0.86
PRKN-201ENST00000338468 ALKBH7Q9BT30 221 aaPredicted RBP9.66□□□□□ -0.86
PRKN-201ENST00000338468 PLAC8Q9NZF1 115 aa9.66□□□□□ -0.86
PRKN-201ENST00000338468 LRP1Q07954 4544 aaKnown RBP9.65□□□□□ -0.86
PRKN-201ENST00000338468 IGIPA6NJ69 53 aa9.65□□□□□ -0.86
PRKN-201ENST00000338468 LINC00242Q5T6M2 205 aa9.65□□□□□ -0.86
PRKN-201ENST00000338468 Q6ZRU5 148 aa9.65□□□□□ -0.86
PRKN-201ENST00000338468 IGKV2-24A0A0C4DH68 120 aa9.64□□□□□ -0.87
PRKN-201ENST00000338468 AMELXQ99217 191 aa9.64□□□□□ -0.87
PRKN-201ENST00000338468 PLA2G2DQ9UNK4 145 aa9.64□□□□□ -0.87
PRKN-201ENST00000338468 FAT3Q8TDW7 4589 aa9.64□□□□□ -0.87
PRKN-201ENST00000338468 TGIF2-C20orf24A0A0A6YYL0 155 aa9.63□□□□□ -0.87
PRKN-201ENST00000338468 APOMO95445 188 aa9.63□□□□□ -0.87
PRKN-201ENST00000338468 APOC3P02656 99 aa9.63□□□□□ -0.87
PRKN-201ENST00000338468 UBE2D1P51668 147 aa9.63□□□□□ -0.87
PRKN-201ENST00000338468 RPL37AP61513 92 aaKnown RBP9.63□□□□□ -0.87
PRKN-201ENST00000338468 SPAG11BQ08648 103 aa9.63□□□□□ -0.87
PRKN-201ENST00000338468 MAJINQ3KP22 176 aa9.63□□□□□ -0.87
PRKN-201ENST00000338468 DPH3Q96FX2 82 aa9.63□□□□□ -0.87
PRKN-201ENST00000338468 C2orf48Q96LS8 159 aa9.63□□□□□ -0.87
PRKN-201ENST00000338468 MRPL18Q9H0U6 180 aaKnown RBP9.63□□□□□ -0.87
PRKN-201ENST00000338468 LINC01546A6NGU7 62 aa9.62□□□□□ -0.87
PRKN-201ENST00000338468 NPSP0C0P6 89 aa9.62□□□□□ -0.87
PRKN-201ENST00000338468 COX19Q49B96 90 aa9.62□□□□□ -0.87
PRKN-201ENST00000338468 TEX43Q6ZNM6 134 aa9.62□□□□□ -0.87
PRKN-201ENST00000338468 OR10D4PQ8NGN7 298 aa9.62□□□□□ -0.87
PRKN-201ENST00000338468 ORAOV1Q8WV07 137 aa9.62□□□□□ -0.87
PRKN-201ENST00000338468 TOMM6Q96B49 74 aa9.62□□□□□ -0.87
PRKN-201ENST00000338468 A0A087WZ39 114 aa9.61□□□□□ -0.87
PRKN-201ENST00000338468 MT-ND6P03923 174 aa9.61□□□□□ -0.87
PRKN-201ENST00000338468 HNRNPA3P51991 378 aaKnown RBP9.61□□□□□ -0.87
PRKN-201ENST00000338468 CAMK2N2Q96S95 79 aa9.61□□□□□ -0.87
PRKN-201ENST00000338468 FABP9Q0Z7S8 132 aa9.6□□□□□ -0.87
PRKN-201ENST00000338468 KIAA0087Q14695 138 aa9.6□□□□□ -0.87
PRKN-201ENST00000338468 STPG4Q8N801 248 aa9.6□□□□□ -0.87
PRKN-201ENST00000338468 VCX2Q9H322 139 aa9.6□□□□□ -0.87
PRKN-201ENST00000338468 A0A0J9YXV3 536 aa9.59□□□□□ -0.87
PRKN-201ENST00000338468 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.59□□□□□ -0.87
PRKN-201ENST00000338468 SNAPINO95295 136 aa9.59□□□□□ -0.87
PRKN-201ENST00000338468 C10orf25Q5T742 122 aa9.59□□□□□ -0.87
PRKN-201ENST00000338468 Q6ZN92 141 aa9.59□□□□□ -0.87
PRKN-201ENST00000338468 FAM19A3Q7Z5A8 133 aa9.59□□□□□ -0.87
PRKN-201ENST00000338468 SVBPQ8N300 66 aa9.59□□□□□ -0.87
PRKN-201ENST00000338468 TIMM17AQ99595 171 aa9.59□□□□□ -0.87
PRKN-201ENST00000338468 LOC107984640A0A0U1RRK4 108 aa9.58□□□□□ -0.88
PRKN-201ENST00000338468 OXTP01178 125 aa9.58□□□□□ -0.88
PRKN-201ENST00000338468 PTTG1IPP53801 180 aa9.58□□□□□ -0.88
PRKN-201ENST00000338468 YPEL4Q96NS1 127 aa9.58□□□□□ -0.88
PRKN-201ENST00000338468 C2orf88Q9BSF0 95 aa9.58□□□□□ -0.88
PRKN-201ENST00000338468 LINC00474Q9P2X8 69 aa9.58□□□□□ -0.88
PRKN-201ENST00000338468 G0S2P27469 103 aa9.57□□□□□ -0.88
PRKN-201ENST00000338468 NDUFA5Q16718 116 aa9.57□□□□□ -0.88
PRKN-201ENST00000338468 ERASQ7Z444 233 aa9.57□□□□□ -0.88
PRKN-201ENST00000338468 URB1-AS1Q96HZ7 61 aa9.57□□□□□ -0.88
PRKN-201ENST00000338468 MRPL35Q9NZE8 188 aaKnown RBP9.57□□□□□ -0.88
PRKN-201ENST00000338468 PKIGQ9Y2B9 76 aa9.57□□□□□ -0.88
PRKN-201ENST00000338468 F8WDY8 70 aa9.56□□□□□ -0.88
PRKN-201ENST00000338468 GAGE2BQ13066 116 aa9.56□□□□□ -0.88
PRKN-201ENST00000338468 RNF151Q2KHN1 245 aa9.56□□□□□ -0.88
PRKN-201ENST00000338468 UNQ6190/PRO20217Q6UXQ8 127 aa9.56□□□□□ -0.88
PRKN-201ENST00000338468 LINC01561Q8N1V8 128 aa9.56□□□□□ -0.88
PRKN-201ENST00000338468 TRAPPC1Q9Y5R8 145 aa9.56□□□□□ -0.88
PRKN-201ENST00000338468 SCGB3A1Q96QR1 104 aa9.55□□□□□ -0.88
PRKN-201ENST00000338468 C6orf48Q9UBA6 75 aa9.55□□□□□ -0.88
PRKN-201ENST00000338468 A0A096LNJ9 63 aa9.54□□□□□ -0.88
PRKN-201ENST00000338468 A0A1W2PNN7 141 aa9.54□□□□□ -0.88
PRKN-201ENST00000338468 NDUFA1O15239 70 aa9.54□□□□□ -0.88
PRKN-201ENST00000338468 PAPPA-AS1Q5QFB9 102 aa9.54□□□□□ -0.88
PRKN-201ENST00000338468 FA2HQ7L5A8 372 aa9.54□□□□□ -0.88
PRKN-201ENST00000338468 C18orf32Q8TCD1 76 aa9.54□□□□□ -0.88
PRKN-201ENST00000338468 CDKN2A-AS1Q9UH64 79 aa9.53□□□□□ -0.88
PRKN-201ENST00000338468 RPL18AQ02543 176 aaKnown RBP9.52□□□□□ -0.89
PRKN-201ENST00000338468 C2orf82Q6UX34 121 aa9.52□□□□□ -0.89
PRKN-201ENST00000338468 C7orf33Q8WU49 177 aa9.52□□□□□ -0.89
PRKN-201ENST00000338468 LINC01549A6NIU2 74 aa9.51□□□□□ -0.89
PRKN-201ENST00000338468 TLX1NBP0CAT3 122 aa9.51□□□□□ -0.89
PRKN-201ENST00000338468 HERVK_113P63121 156 aa9.51□□□□□ -0.89
PRKN-201ENST00000338468 Q6ZRP5 223 aa9.51□□□□□ -0.89
PRKN-201ENST00000338468 CST9LQ9H4G1 147 aa9.51□□□□□ -0.89
PRKN-201ENST00000338468 SMCO4Q9NRQ5 59 aa9.51□□□□□ -0.89
PRKN-201ENST00000338468 SEC11AP67812 179 aa9.5□□□□□ -0.89
PRKN-201ENST00000338468 PRR3P79522 188 aaKnown RBP9.5□□□□□ -0.89
PRKN-201ENST00000338468 C9orf116Q5BN46 136 aaPredicted RBP9.5□□□□□ -0.89
PRKN-201ENST00000338468 SLC7A5P1Q8MH63 180 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms