RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 FBN3Q75N90 2809 aa10.02□□□□□ -0.8
CDK5RAP3-201ENST00000338399 TMEM223A0PJW6 202 aa10.02□□□□□ -0.8
CDK5RAP3-201ENST00000338399 HERVK_113P61574 105 aa10.02□□□□□ -0.8
CDK5RAP3-201ENST00000338399 IGLV5-45A0A087WSX0 123 aa10.02□□□□□ -0.81
CDK5RAP3-201ENST00000338399 TP73-AS1Q9UF72 201 aa10.02□□□□□ -0.81
CDK5RAP3-201ENST00000338399 KLK5Q9Y337 293 aaPredicted RBP10.02□□□□□ -0.81
CDK5RAP3-201ENST00000338399 IGHV3-64A0A075B6Q5 118 aa10.01□□□□□ -0.81
CDK5RAP3-201ENST00000338399 E9PLD3 99 aa10.01□□□□□ -0.81
CDK5RAP3-201ENST00000338399 SS18Q15532 418 aa10.01□□□□□ -0.81
CDK5RAP3-201ENST00000338399 PCP2Q8IVA1 136 aa10.01□□□□□ -0.81
CDK5RAP3-201ENST00000338399 COX8AP10176 69 aa10□□□□□ -0.81
CDK5RAP3-201ENST00000338399 LINC01556Q5JQF7 62 aa10□□□□□ -0.81
CDK5RAP3-201ENST00000338399 TTTY13Q9BZ97 58 aa10□□□□□ -0.81
CDK5RAP3-201ENST00000338399 CSMD3Q7Z407 3707 aa10□□□□□ -0.81
CDK5RAP3-201ENST00000338399 CCL25O15444 150 aa10□□□□□ -0.81
CDK5RAP3-201ENST00000338399 SPINK8P0C7L1 97 aa10□□□□□ -0.81
CDK5RAP3-201ENST00000338399 PCP4P48539 62 aa10□□□□□ -0.81
CDK5RAP3-201ENST00000338399 IGLV10-54A0A075B6I4 117 aa9.99□□□□□ -0.81
CDK5RAP3-201ENST00000338399 TRAV8-3A0A0A6YYJ7 113 aa9.99□□□□□ -0.81
CDK5RAP3-201ENST00000338399 H3BRM9 83 aa9.99□□□□□ -0.81
CDK5RAP3-201ENST00000338399 SIVA1O15304 175 aa9.99□□□□□ -0.81
CDK5RAP3-201ENST00000338399 XCL1P47992 114 aa9.99□□□□□ -0.81
CDK5RAP3-201ENST00000338399 ZFAND6Q6FIF0 208 aa9.99□□□□□ -0.81
CDK5RAP3-201ENST00000338399 SLC25A34Q6PIV7 304 aa9.99□□□□□ -0.81
CDK5RAP3-201ENST00000338399 ENHOQ6UWT2 76 aa9.99□□□□□ -0.81
CDK5RAP3-201ENST00000338399 PRR34Q9NV39 138 aa9.99□□□□□ -0.81
CDK5RAP3-201ENST00000338399 DNAH10OSP0CZ25 163 aa9.98□□□□□ -0.81
CDK5RAP3-201ENST00000338399 UBE2WQ96B02 151 aa9.98□□□□□ -0.81
CDK5RAP3-201ENST00000338399 COX11Q9Y6N1 276 aa9.98□□□□□ -0.81
CDK5RAP3-201ENST00000338399 CRPP02741 224 aa9.98□□□□□ -0.81
CDK5RAP3-201ENST00000338399 C21orf62-AS1Q17RA5 79 aa9.98□□□□□ -0.81
CDK5RAP3-201ENST00000338399 CHCHD10Q8WYQ3 142 aaPredicted RBP9.98□□□□□ -0.81
CDK5RAP3-201ENST00000338399 UPK3BQ9BT76 320 aa9.98□□□□□ -0.81
CDK5RAP3-201ENST00000338399 IGHV3OR16-9A0A0B4J2B5 98 aa9.97□□□□□ -0.81
CDK5RAP3-201ENST00000338399 IGHV1-58A0A0C4DH39 117 aa9.97□□□□□ -0.81
CDK5RAP3-201ENST00000338399 K7EP13 123 aa9.97□□□□□ -0.81
CDK5RAP3-201ENST00000338399 LEPROTO15243 131 aa9.97□□□□□ -0.81
CDK5RAP3-201ENST00000338399 UBE2V1Q13404 147 aa9.97□□□□□ -0.81
CDK5RAP3-201ENST00000338399 BOD1L2Q8IYS8 172 aa9.97□□□□□ -0.81
CDK5RAP3-201ENST00000338399 MAPKAPK5-AS1Q8N8E1 139 aa9.97□□□□□ -0.81
CDK5RAP3-201ENST00000338399 PTTG1IPP53801 180 aa9.96□□□□□ -0.81
CDK5RAP3-201ENST00000338399 TSPEAR-AS2P59090 65 aa9.96□□□□□ -0.81
CDK5RAP3-201ENST00000338399 C5orf38Q86SI9 138 aa9.96□□□□□ -0.81
CDK5RAP3-201ENST00000338399 UBE2DNLQ8IWF7 75 aa9.96□□□□□ -0.81
CDK5RAP3-201ENST00000338399 STARD9Q9P2P6 4700 aa9.96□□□□□ -0.82
CDK5RAP3-201ENST00000338399 SMIM1B2RUZ4 78 aa9.96□□□□□ -0.82
CDK5RAP3-201ENST00000338399 HINT1P49773 126 aaPredicted RBP9.96□□□□□ -0.82
CDK5RAP3-201ENST00000338399 Q9H8V8 135 aa9.96□□□□□ -0.82
CDK5RAP3-201ENST00000338399 PLECQ15149 4684 aaKnown RBP9.95□□□□□ -0.82
CDK5RAP3-201ENST00000338399 J3QQQ9 107 aa9.95□□□□□ -0.82
CDK5RAP3-201ENST00000338399 PLEKHB2Q96CS7 222 aa9.95□□□□□ -0.82
CDK5RAP3-201ENST00000338399 LGALS3P17931 250 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-201ENST00000338399 CD164L2Q6UWJ8 174 aa9.94□□□□□ -0.82
CDK5RAP3-201ENST00000338399 A0A087WZ39 114 aa9.93□□□□□ -0.82
CDK5RAP3-201ENST00000338399 MIAQ16674 131 aa9.93□□□□□ -0.82
CDK5RAP3-201ENST00000338399 MUC7Q8TAX7 377 aa9.93□□□□□ -0.82
CDK5RAP3-201ENST00000338399 LYSTQ99698 3801 aa9.93□□□□□ -0.82
CDK5RAP3-201ENST00000338399 MYMXA0A1B0GTQ4 84 aa9.93□□□□□ -0.82
CDK5RAP3-201ENST00000338399 GAGE12HA6NDE8 117 aa9.93□□□□□ -0.82
CDK5RAP3-201ENST00000338399 ZNF815PA8K554 130 aa9.93□□□□□ -0.82
CDK5RAP3-201ENST00000338399 TRAV8-4A0A0B4J246 113 aa9.92□□□□□ -0.82
CDK5RAP3-201ENST00000338399 IGLV5-39A0A0G2JS06 123 aa9.92□□□□□ -0.82
CDK5RAP3-201ENST00000338399 FOXI1Q12951 378 aa9.91□□□□□ -0.82
CDK5RAP3-201ENST00000338399 C2orf91Q6ZV80 131 aa9.91□□□□□ -0.82
CDK5RAP3-201ENST00000338399 WWC2-AS2Q96NR7 200 aa9.91□□□□□ -0.82
CDK5RAP3-201ENST00000338399 COX7A2LO14548 114 aa9.91□□□□□ -0.82
CDK5RAP3-201ENST00000338399 Q6ZVH6 145 aa9.91□□□□□ -0.82
CDK5RAP3-201ENST00000338399 Q9HAA7 133 aa9.9□□□□□ -0.82
CDK5RAP3-201ENST00000338399 TGP01266 2768 aa9.9□□□□□ -0.82
CDK5RAP3-201ENST00000338399 IBA57-AS1B1ANH7 110 aa9.89□□□□□ -0.83
CDK5RAP3-201ENST00000338399 MALP21145 153 aa9.89□□□□□ -0.83
CDK5RAP3-201ENST00000338399 C10orf126Q8N4M7 172 aa9.89□□□□□ -0.83
CDK5RAP3-201ENST00000338399 TOMM7Q9P0U1 55 aa9.89□□□□□ -0.83
CDK5RAP3-201ENST00000338399 NDUFA12Q9UI09 145 aa9.89□□□□□ -0.83
CDK5RAP3-201ENST00000338399 IGKV2D-24A0A075B6R9 120 aa9.88□□□□□ -0.83
CDK5RAP3-201ENST00000338399 LINC01561Q8N1V8 128 aa9.88□□□□□ -0.83
CDK5RAP3-201ENST00000338399 COX7B2Q8TF08 81 aa9.88□□□□□ -0.83
CDK5RAP3-201ENST00000338399 C1orf43Q9BWL3 253 aa9.88□□□□□ -0.83
CDK5RAP3-201ENST00000338399 KRTAP26-1Q6PEX3 210 aa9.87□□□□□ -0.83
CDK5RAP3-201ENST00000338399 SCGB1D4Q6XE38 83 aa9.87□□□□□ -0.83
CDK5RAP3-201ENST00000338399 TAX1BP3O14907 124 aa9.86□□□□□ -0.83
CDK5RAP3-201ENST00000338399 HIGD1BQ9P298 99 aa9.86□□□□□ -0.83
CDK5RAP3-201ENST00000338399 DNAH1Q9P2D7 4330 aa9.86□□□□□ -0.83
CDK5RAP3-201ENST00000338399 TENM2Q9NT68 2774 aa9.85□□□□□ -0.83
CDK5RAP3-201ENST00000338399 BVES-AS1Q5T3Y7 98 aa9.85□□□□□ -0.83
CDK5RAP3-201ENST00000338399 KRTAP1-5Q9BYS1 174 aa9.85□□□□□ -0.83
CDK5RAP3-201ENST00000338399 NDUFA1O15239 70 aa9.85□□□□□ -0.83
CDK5RAP3-201ENST00000338399 A0A0J9YXY3 114 aa9.84□□□□□ -0.83
CDK5RAP3-201ENST00000338399 VAMP3Q15836 100 aa9.84□□□□□ -0.83
CDK5RAP3-201ENST00000338399 APOMO95445 188 aa9.83□□□□□ -0.84
CDK5RAP3-201ENST00000338399 PRSS2P07478 247 aa9.83□□□□□ -0.84
CDK5RAP3-201ENST00000338399 C6orf226Q5I0X4 101 aa9.83□□□□□ -0.84
CDK5RAP3-201ENST00000338399 Q8IZM0 81 aa9.83□□□□□ -0.84
CDK5RAP3-201ENST00000338399 ZNF625Q96I27 306 aaPredicted RBP9.83□□□□□ -0.84
CDK5RAP3-201ENST00000338399 CASC10Q5T4H9 136 aa9.83□□□□□ -0.84
CDK5RAP3-201ENST00000338399 VPS13DQ5THJ4 4388 aa9.82□□□□□ -0.84
CDK5RAP3-201ENST00000338399 KIAA0087Q14695 138 aa9.82□□□□□ -0.84
CDK5RAP3-201ENST00000338399 RMI2Q96E14 147 aa9.82□□□□□ -0.84
CDK5RAP3-201ENST00000338399 CFAP161Q6P656 301 aa9.81□□□□□ -0.84
CDK5RAP3-201ENST00000338399 NBDYA0A0U1RRE5 68 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms