RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 FOXI1Q12951 378 aa4.55□□□□□ -1.68
PRKDC-202ENST00000338368 LINC00308Q8TCZ7 52 aa4.55□□□□□ -1.68
PRKDC-202ENST00000338368 PTH2Q96A98 100 aa4.55□□□□□ -1.68
PRKDC-202ENST00000338368 NDUFC2O95298 119 aa4.55□□□□□ -1.68
PRKDC-202ENST00000338368 FAM240AA0A1B0GVK7 77 aa4.54□□□□□ -1.68
PRKDC-202ENST00000338368 H0YGX0 51 aa4.54□□□□□ -1.68
PRKDC-202ENST00000338368 TCL1BO95988 128 aa4.54□□□□□ -1.68
PRKDC-202ENST00000338368 CLEC2BQ92478 149 aa4.54□□□□□ -1.68
PRKDC-202ENST00000338368 IGLV4-69A0A075B6H9 119 aa4.54□□□□□ -1.68
PRKDC-202ENST00000338368 F8WDY8 70 aa4.54□□□□□ -1.68
PRKDC-202ENST00000338368 CHCHD10Q8WYQ3 142 aaPredicted RBP4.54□□□□□ -1.68
PRKDC-202ENST00000338368 TRBV10-2A0A0K0K1G8 114 aa4.54□□□□□ -1.68
PRKDC-202ENST00000338368 H3BT86 120 aa4.54□□□□□ -1.68
PRKDC-202ENST00000338368 ZNF706Q9Y5V0 76 aaPredicted RBP4.54□□□□□ -1.68
PRKDC-202ENST00000338368 UBE2D1P51668 147 aa4.54□□□□□ -1.68
PRKDC-202ENST00000338368 CHCHD7Q9BUK0 85 aa4.54□□□□□ -1.68
PRKDC-202ENST00000338368 Q6ZSN1 163 aa4.53□□□□□ -1.68
PRKDC-202ENST00000338368 C11orf45Q8TAV5 145 aa4.53□□□□□ -1.68
PRKDC-202ENST00000338368 BEAN1Q3B7T3 259 aa4.53□□□□□ -1.68
PRKDC-202ENST00000338368 CDC42SE2Q9NRR3 84 aa4.53□□□□□ -1.68
PRKDC-202ENST00000338368 HIST1H4AP62805 103 aaKnown RBP4.53□□□□□ -1.68
PRKDC-202ENST00000338368 OXLD1Q5BKU9 147 aa4.53□□□□□ -1.68
PRKDC-202ENST00000338368 FAM110AQ9BQ89 295 aa4.53□□□□□ -1.69
PRKDC-202ENST00000338368 CHD9Q3L8U1 2897 aa4.52□□□□□ -1.69
PRKDC-202ENST00000338368 UBL5Q9BZL1 73 aa4.52□□□□□ -1.69
PRKDC-202ENST00000338368 IGHV4-30-4P0DP06 118 aa4.52□□□□□ -1.69
PRKDC-202ENST00000338368 A0A096LNT2 108 aa4.52□□□□□ -1.69
PRKDC-202ENST00000338368 LINC00242Q5T6M2 205 aa4.52□□□□□ -1.69
PRKDC-202ENST00000338368 M0QXV9 152 aa4.52□□□□□ -1.69
PRKDC-202ENST00000338368 NDUFA1O15239 70 aa4.52□□□□□ -1.69
PRKDC-202ENST00000338368 LECT2O14960 151 aa4.52□□□□□ -1.69
PRKDC-202ENST00000338368 FHL3Q13643 280 aa4.52□□□□□ -1.69
PRKDC-202ENST00000338368 LINC00959A0A1B0GUT2 108 aa4.51□□□□□ -1.69
PRKDC-202ENST00000338368 AMELXQ99217 191 aa4.51□□□□□ -1.69
PRKDC-202ENST00000338368 IBA57-AS1B1ANH7 110 aa4.51□□□□□ -1.69
PRKDC-202ENST00000338368 HELZ2Q9BYK8 2649 aaKnown RBP4.51□□□□□ -1.69
PRKDC-202ENST00000338368 B9D2Q9BPU9 175 aa4.51□□□□□ -1.69
PRKDC-202ENST00000338368 CFAP46Q8IYW2 2715 aa4.51□□□□□ -1.69
PRKDC-202ENST00000338368 TIMM17BO60830 172 aa4.51□□□□□ -1.69
PRKDC-202ENST00000338368 FHL2Q14192 279 aa4.51□□□□□ -1.69
PRKDC-202ENST00000338368 POM121L12Q8N7R1 296 aa4.51□□□□□ -1.69
PRKDC-202ENST00000338368 NDUFC1O43677 76 aa4.51□□□□□ -1.69
PRKDC-202ENST00000338368 ORMDL1Q9P0S3 153 aa4.51□□□□□ -1.69
PRKDC-202ENST00000338368 SMIM1B2RUZ4 78 aa4.51□□□□□ -1.69
PRKDC-202ENST00000338368 TSPEAR-AS2P59090 65 aa4.51□□□□□ -1.69
PRKDC-202ENST00000338368 C11orf72Q8NBR9 251 aa4.51□□□□□ -1.69
PRKDC-202ENST00000338368 XIRP2A4UGR9 3374 aa4.51□□□□□ -1.69
PRKDC-202ENST00000338368 DEFB131BA0A096LNP1 70 aa4.51□□□□□ -1.69
PRKDC-202ENST00000338368 LINC01546A6NGU7 62 aa4.51□□□□□ -1.69
PRKDC-202ENST00000338368 LINC00694P0DN24 101 aa4.51□□□□□ -1.69
PRKDC-202ENST00000338368 NDUFV3P56181 108 aaKnown RBP4.51□□□□□ -1.69
PRKDC-202ENST00000338368 HIGD2BQ4VC39 106 aa4.5□□□□□ -1.69
PRKDC-202ENST00000338368 TRIAP1O43715 76 aa4.5□□□□□ -1.69
PRKDC-202ENST00000338368 TRBV30A0A0K0K1B3 111 aa4.5□□□□□ -1.69
PRKDC-202ENST00000338368 UQCRQO14949 82 aa4.5□□□□□ -1.69
PRKDC-202ENST00000338368 SS18L2Q9UHA2 77 aa4.5□□□□□ -1.69
PRKDC-202ENST00000338368 TRAV10A0A0B4J240 114 aa4.5□□□□□ -1.69
PRKDC-202ENST00000338368 Q6Q795 121 aa4.5□□□□□ -1.69
PRKDC-202ENST00000338368 NCR3O14931 201 aa4.49□□□□□ -1.69
PRKDC-202ENST00000338368 RPL18AQ02543 176 aaKnown RBP4.49□□□□□ -1.69
PRKDC-202ENST00000338368 Q9UF83 564 aa4.49□□□□□ -1.69
PRKDC-202ENST00000338368 COX6A2Q02221 97 aa4.49□□□□□ -1.69
PRKDC-202ENST00000338368 IGLV4-60A0A075B6I1 120 aa4.49□□□□□ -1.69
PRKDC-202ENST00000338368 hADV29S1A0JD25 119 aa4.49□□□□□ -1.69
PRKDC-202ENST00000338368 C5orf47Q569G3 176 aa4.49□□□□□ -1.69
PRKDC-202ENST00000338368 C5orf42Q9H799 3197 aa4.49□□□□□ -1.69
PRKDC-202ENST00000338368 HAMPP81172 84 aa4.49□□□□□ -1.69
PRKDC-202ENST00000338368 B5MCH6 92 aa4.48□□□□□ -1.69
PRKDC-202ENST00000338368 CSDC2Q9Y534 153 aaKnown RBP4.48□□□□□ -1.69
PRKDC-202ENST00000338368 ETDCA0A1B0GVM5 59 aa4.48□□□□□ -1.69
PRKDC-202ENST00000338368 CD164L2Q6UWJ8 174 aa4.48□□□□□ -1.69
PRKDC-202ENST00000338368 LELP1Q5T871 98 aa4.48□□□□□ -1.69
PRKDC-202ENST00000338368 JMJD7-PLA2G4BH0Y9G9 81 aa4.48□□□□□ -1.69
PRKDC-202ENST00000338368 FLNBO75369 2602 aaKnown RBP4.47□□□□□ -1.69
PRKDC-202ENST00000338368 SZT2Q5T011 3432 aa4.47□□□□□ -1.69
PRKDC-202ENST00000338368 UFSP1Q6NVU6 142 aa4.47□□□□□ -1.69
PRKDC-202ENST00000338368 XAGE1AQ9HD64 81 aa4.47□□□□□ -1.69
PRKDC-202ENST00000338368 NTM-AS1Q6ZSK4 140 aa4.47□□□□□ -1.69
PRKDC-202ENST00000338368 UBE2AP49459 152 aa4.47□□□□□ -1.69
PRKDC-202ENST00000338368 LINC00526Q96FQ7 95 aa4.47□□□□□ -1.69
PRKDC-202ENST00000338368 TEX49A0A1B0GTD5 131 aa4.46□□□□□ -1.69
PRKDC-202ENST00000338368 SEC61GP60059 68 aa4.46□□□□□ -1.69
PRKDC-202ENST00000338368 ADAMTSL4-AS1Q5T5F5 129 aa4.46□□□□□ -1.7
PRKDC-202ENST00000338368 KPRPQ5T749 579 aaPredicted RBP4.46□□□□□ -1.7
PRKDC-202ENST00000338368 LST1O00453 97 aa4.46□□□□□ -1.7
PRKDC-202ENST00000338368 DIRC1Q969H9 104 aa4.46□□□□□ -1.7
PRKDC-202ENST00000338368 TMEM256-PLSCR3K7ERE1 68 aa4.46□□□□□ -1.7
PRKDC-202ENST00000338368 PRB2P02812 416 aaPredicted RBP4.46□□□□□ -1.7
PRKDC-202ENST00000338368 COX17Q14061 63 aa4.46□□□□□ -1.7
PRKDC-202ENST00000338368 DEFB105AQ8NG35 78 aa4.45□□□□□ -1.7
PRKDC-202ENST00000338368 A8MTW9 85 aa4.45□□□□□ -1.7
PRKDC-202ENST00000338368 Q8IZM0 81 aa4.44□□□□□ -1.7
PRKDC-202ENST00000338368 NDUFC2-KCTD14E9PQ53 114 aa4.44□□□□□ -1.7
PRKDC-202ENST00000338368 LINC00643Q86TS7 51 aa4.44□□□□□ -1.7
PRKDC-202ENST00000338368 C6orf99Q4VX62 202 aa4.44□□□□□ -1.7
PRKDC-202ENST00000338368 SMIM11BQ8TCY0 68 aa4.44□□□□□ -1.7
PRKDC-202ENST00000338368 RETNQ9HD89 108 aa4.44□□□□□ -1.7
PRKDC-202ENST00000338368 A0A087WZ39 114 aa4.44□□□□□ -1.7
PRKDC-202ENST00000338368 Q6ZTC4 211 aa4.44□□□□□ -1.7
PRKDC-202ENST00000338368 V9GYY9 64 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms