RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 MUSTN1Q8IVN3 82 aa16.31■□□□□ 0.2
CLPTM1-201ENST00000337392 SMIM20Q8N5G0 67 aa16.31■□□□□ 0.2
CLPTM1-201ENST00000337392 IGHV1-58A0A0C4DH39 117 aa16.3■□□□□ 0.2
CLPTM1-201ENST00000337392 A4D1N5 150 aa16.3■□□□□ 0.2
CLPTM1-201ENST00000337392 LINC00242Q5T6M2 205 aa16.3■□□□□ 0.2
CLPTM1-201ENST00000337392 VSIG2Q96IQ7 327 aa16.3■□□□□ 0.2
CLPTM1-201ENST00000337392 X6R8D5 127 aa16.3■□□□□ 0.2
CLPTM1-201ENST00000337392 LOC107984156A0A0G2JMH3 177 aa16.29■□□□□ 0.2
CLPTM1-201ENST00000337392 TRBV10-1A0A0K0K1A3 114 aa16.29■□□□□ 0.2
CLPTM1-201ENST00000337392 ARL17AQ8IVW1 177 aa16.29■□□□□ 0.2
CLPTM1-201ENST00000337392 OVOL2Q9BRP0 275 aa16.29■□□□□ 0.2
CLPTM1-201ENST00000337392 NDUFA12Q9UI09 145 aa16.29■□□□□ 0.2
CLPTM1-201ENST00000337392 DAZ4Q86SG3 579 aaKnown RBP16.29■□□□□ 0.2
CLPTM1-201ENST00000337392 DAZ3Q9NR90 486 aaKnown RBP16.29■□□□□ 0.2
CLPTM1-201ENST00000337392 PRSS2P07478 247 aa16.28■□□□□ 0.2
CLPTM1-201ENST00000337392 COL6A5A8TX70 2615 aa16.27■□□□□ 0.2
CLPTM1-201ENST00000337392 SBSPONQ8IVN8 264 aa16.27■□□□□ 0.2
CLPTM1-201ENST00000337392 TMEM101Q96IK0 257 aa16.27■□□□□ 0.19
CLPTM1-201ENST00000337392 TENM3Q9P273 2699 aa16.26■□□□□ 0.19
CLPTM1-201ENST00000337392 LITAFQ99732 161 aa16.26■□□□□ 0.19
CLPTM1-201ENST00000337392 IGLV4-60A0A075B6I1 120 aa16.25■□□□□ 0.19
CLPTM1-201ENST00000337392 NHLRC4P0CG21 123 aaPredicted RBP16.25■□□□□ 0.19
CLPTM1-201ENST00000337392 CDC42SE2Q9NRR3 84 aa16.25■□□□□ 0.19
CLPTM1-201ENST00000337392 UBE2L6O14933 153 aa16.24■□□□□ 0.19
CLPTM1-201ENST00000337392 SMCPP49901 116 aaPredicted RBP16.24■□□□□ 0.19
CLPTM1-201ENST00000337392 CITED1Q99966 193 aa16.23■□□□□ 0.19
CLPTM1-201ENST00000337392 TMEM243Q9BU79 118 aa16.23■□□□□ 0.19
CLPTM1-201ENST00000337392 TRBV6-4A0A1B0GX49 114 aa16.23■□□□□ 0.19
CLPTM1-201ENST00000337392 C9orf66Q5T8R8 295 aa16.23■□□□□ 0.19
CLPTM1-201ENST00000337392 FAM222AQ5U5X8 452 aa16.22■□□□□ 0.19
CLPTM1-201ENST00000337392 CHCHD5Q9BSY4 110 aa16.21■□□□□ 0.19
CLPTM1-201ENST00000337392 GYPEP15421 78 aa16.2■□□□□ 0.18
CLPTM1-201ENST00000337392 PSMB2P49721 201 aa16.2■□□□□ 0.18
CLPTM1-201ENST00000337392 ATP6V0E2Q8NHE4 81 aa16.19■□□□□ 0.18
CLPTM1-201ENST00000337392 CLPSL2Q6UWE3 100 aa16.18■□□□□ 0.18
CLPTM1-201ENST00000337392 Q9H8V8 135 aa16.18■□□□□ 0.18
CLPTM1-201ENST00000337392 SMIM1B2RUZ4 78 aa16.18■□□□□ 0.18
CLPTM1-201ENST00000337392 Q8N3U1 123 aa16.18■□□□□ 0.18
CLPTM1-201ENST00000337392 CELA1Q9UNI1 258 aa16.17■□□□□ 0.18
CLPTM1-201ENST00000337392 TRBV6-8A0A0A6YYG3 113 aa16.17■□□□□ 0.18
CLPTM1-201ENST00000337392 ZFAND6Q6FIF0 208 aa16.17■□□□□ 0.18
CLPTM1-201ENST00000337392 IGLV5-45A0A087WSX0 123 aa16.16■□□□□ 0.18
CLPTM1-201ENST00000337392 CCDC179H3BU77 68 aa16.16■□□□□ 0.18
CLPTM1-201ENST00000337392 OXLD1Q5BKU9 147 aa16.16■□□□□ 0.18
CLPTM1-201ENST00000337392 CARD19Q96LW7 228 aa16.16■□□□□ 0.18
CLPTM1-201ENST00000337392 NBEAL1Q6ZS30 2694 aa16.16■□□□□ 0.18
CLPTM1-201ENST00000337392 TIRAPP58753 221 aa16.16■□□□□ 0.18
CLPTM1-201ENST00000337392 PRO1854Q9UHT4 67 aa16.16■□□□□ 0.18
CLPTM1-201ENST00000337392 IGHV4-28A0A0C4DH34 117 aa16.15■□□□□ 0.18
CLPTM1-201ENST00000337392 HERVK_113P63121 156 aa16.15■□□□□ 0.18
CLPTM1-201ENST00000337392 TCL1BO95988 128 aa16.14■□□□□ 0.17
CLPTM1-201ENST00000337392 BAHCC1Q9P281 2608 aa16.13■□□□□ 0.17
CLPTM1-201ENST00000337392 F5H768 121 aa16.13■□□□□ 0.17
CLPTM1-201ENST00000337392 CSDC2Q9Y534 153 aaKnown RBP16.13■□□□□ 0.17
CLPTM1-201ENST00000337392 HTN3P15516 51 aa16.12■□□□□ 0.17
CLPTM1-201ENST00000337392 TMEM262E9PQX1 116 aa16.12■□□□□ 0.17
CLPTM1-201ENST00000337392 KIR2DL5BQ8NHK3 375 aa16.12■□□□□ 0.17
CLPTM1-201ENST00000337392 TOMM7Q9P0U1 55 aa16.12■□□□□ 0.17
CLPTM1-201ENST00000337392 IGHV3-33P01772 117 aa16.11■□□□□ 0.17
CLPTM1-201ENST00000337392 SCGB1C2P0DMR2 95 aa16.11■□□□□ 0.17
CLPTM1-201ENST00000337392 IGHV4-30-4P0DP06 118 aa16.11■□□□□ 0.17
CLPTM1-201ENST00000337392 Q1RN00 199 aa16.11■□□□□ 0.17
CLPTM1-201ENST00000337392 IGLV5-39A0A0G2JS06 123 aa16.1■□□□□ 0.17
CLPTM1-201ENST00000337392 TRBV20-1A0A075B6N2 111 aa16.09■□□□□ 0.17
CLPTM1-201ENST00000337392 LINC00612Q8N6U2 182 aa16.09■□□□□ 0.17
CLPTM1-201ENST00000337392 MIAQ16674 131 aa16.09■□□□□ 0.17
CLPTM1-201ENST00000337392 C5orf38Q86SI9 138 aa16.09■□□□□ 0.17
CLPTM1-201ENST00000337392 C11orf68Q9H3H3 251 aaKnown RBP16.09■□□□□ 0.17
CLPTM1-201ENST00000337392 NDUFA1O15239 70 aa16.08■□□□□ 0.16
CLPTM1-201ENST00000337392 PRIMA1Q86XR5 153 aa16.08■□□□□ 0.16
CLPTM1-201ENST00000337392 PPDPFLQ8WWR9 84 aa16.08■□□□□ 0.16
CLPTM1-201ENST00000337392 RETNQ9HD89 108 aa16.07■□□□□ 0.16
CLPTM1-201ENST00000337392 NDUFV3P56181 108 aaKnown RBP16.07■□□□□ 0.16
CLPTM1-201ENST00000337392 PAX4O43316 350 aa16.06■□□□□ 0.16
CLPTM1-201ENST00000337392 SOSTDC1Q6X4U4 206 aa16.06■□□□□ 0.16
CLPTM1-201ENST00000337392 PRO0255Q9UI72 69 aa16.05■□□□□ 0.16
CLPTM1-201ENST00000337392 CYSRT1A8MQ03 144 aa16.05■□□□□ 0.16
CLPTM1-201ENST00000337392 KRTAP24-1Q3LI83 254 aa16.04■□□□□ 0.16
CLPTM1-201ENST00000337392 MEIG1Q5JSS6 88 aa16.04■□□□□ 0.16
CLPTM1-201ENST00000337392 Q8NAQ8 132 aa16.04■□□□□ 0.16
CLPTM1-201ENST00000337392 XCL1P47992 114 aa16.04■□□□□ 0.16
CLPTM1-201ENST00000337392 SPANXDQ9BXN6 97 aa16.04■□□□□ 0.16
CLPTM1-201ENST00000337392 SPANXCQ9NY87 97 aa16.04■□□□□ 0.16
CLPTM1-201ENST00000337392 TEN1Q86WV5 123 aa16.03■□□□□ 0.16
CLPTM1-201ENST00000337392 A0A0B4J2C4 111 aa16.02■□□□□ 0.16
CLPTM1-201ENST00000337392 KRTAP10-11P60412 298 aa16.02■□□□□ 0.16
CLPTM1-201ENST00000337392 DAD1P61803 113 aa16.02■□□□□ 0.16
CLPTM1-201ENST00000337392 TRIAP1O43715 76 aa16.02■□□□□ 0.15
CLPTM1-201ENST00000337392 APOC4P55056 127 aa16.02■□□□□ 0.15
CLPTM1-201ENST00000337392 FAM19A3Q7Z5A8 133 aa16.02■□□□□ 0.15
CLPTM1-201ENST00000337392 PPDPFQ9H3Y8 114 aa16.01■□□□□ 0.15
CLPTM1-201ENST00000337392 WFDC9Q8NEX5 89 aa16.01■□□□□ 0.15
CLPTM1-201ENST00000337392 IGLV10-54A0A075B6I4 117 aa16■□□□□ 0.15
CLPTM1-201ENST00000337392 SMIM9A6NGZ8 99 aa16■□□□□ 0.15
CLPTM1-201ENST00000337392 LINC00308Q8TCZ7 52 aa16■□□□□ 0.15
CLPTM1-201ENST00000337392 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.98■□□□□ 0.15
CLPTM1-201ENST00000337392 IGHV3OR16-9A0A0B4J2B5 98 aa15.98■□□□□ 0.15
CLPTM1-201ENST00000337392 GAGE2BQ13066 116 aa15.98■□□□□ 0.15
CLPTM1-201ENST00000337392 GAGE2EQ4V326 116 aa15.98■□□□□ 0.15
CLPTM1-201ENST00000337392 GAGE2DQ9UEU5 116 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms