RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 J3QLI3 93 aa16.84■□□□□ 0.29
TSKU-201ENST00000333090 CDC42SE2Q9NRR3 84 aa16.84■□□□□ 0.29
TSKU-201ENST00000333090 CSDC2Q9Y534 153 aaKnown RBP16.84■□□□□ 0.29
TSKU-201ENST00000333090 DEFB114Q30KQ6 69 aa16.83■□□□□ 0.29
TSKU-201ENST00000333090 LINC00643Q86TS7 51 aa16.83■□□□□ 0.29
TSKU-201ENST00000333090 K7EQD1 137 aa16.83■□□□□ 0.28
TSKU-201ENST00000333090 HERV-K104P63124 156 aa16.83■□□□□ 0.28
TSKU-201ENST00000333090 Q9HAA7 133 aa16.83■□□□□ 0.28
TSKU-201ENST00000333090 Q96MF0 132 aa16.83■□□□□ 0.28
TSKU-201ENST00000333090 Q6ZTI0 123 aa16.82■□□□□ 0.28
TSKU-201ENST00000333090 C22orf24Q9Y442 160 aa16.82■□□□□ 0.28
TSKU-201ENST00000333090 C1orf158Q8N1D5 194 aa16.82■□□□□ 0.28
TSKU-201ENST00000333090 HIST2H2BCQ6DN03 193 aa16.81■□□□□ 0.28
TSKU-201ENST00000333090 STHQ8IWL8 128 aa16.8■□□□□ 0.28
TSKU-201ENST00000333090 ODF3L2Q3SX64 289 aa16.8■□□□□ 0.28
TSKU-201ENST00000333090 FAM110AQ9BQ89 295 aa16.8■□□□□ 0.28
TSKU-201ENST00000333090 TRBV10-1A0A0K0K1A3 114 aa16.79■□□□□ 0.28
TSKU-201ENST00000333090 GAGE2AQ6NT46 116 aa16.79■□□□□ 0.28
TSKU-201ENST00000333090 C4orf3Q8WVX3 66 aa16.78■□□□□ 0.28
TSKU-201ENST00000333090 UBE2L6O14933 153 aa16.78■□□□□ 0.28
TSKU-201ENST00000333090 CRPP02741 224 aa16.78■□□□□ 0.28
TSKU-201ENST00000333090 TOMM7Q9P0U1 55 aa16.77■□□□□ 0.28
TSKU-201ENST00000333090 ITPR3Q14573 2671 aa16.77■□□□□ 0.27
TSKU-201ENST00000333090 TRAV13-2A0A0B4J235 113 aa16.76■□□□□ 0.27
TSKU-201ENST00000333090 MIR7-3HGQ8N6C7 128 aa16.76■□□□□ 0.27
TSKU-201ENST00000333090 IL17DQ8TAD2 202 aa16.76■□□□□ 0.27
TSKU-201ENST00000333090 LINC00337Q8N6G1 96 aa16.76■□□□□ 0.27
TSKU-201ENST00000333090 INAFM2P0DMQ5 153 aa16.76■□□□□ 0.27
TSKU-201ENST00000333090 FAM222AQ5U5X8 452 aa16.76■□□□□ 0.27
TSKU-201ENST00000333090 IGKV3OR2-268A0A0C4DH90 116 aa16.75■□□□□ 0.27
TSKU-201ENST00000333090 MALP21145 153 aa16.75■□□□□ 0.27
TSKU-201ENST00000333090 RPL28P46779 137 aaKnown RBP16.75■□□□□ 0.27
TSKU-201ENST00000333090 IGHV4-31P0DP07 118 aa16.74■□□□□ 0.27
TSKU-201ENST00000333090 SDIM1Q6ZPB5 146 aa16.74■□□□□ 0.27
TSKU-201ENST00000333090 TMEM243Q9BU79 118 aa16.74■□□□□ 0.27
TSKU-201ENST00000333090 FSHBP01225 129 aa16.74■□□□□ 0.27
TSKU-201ENST00000333090 SND1-IT1Q9HBX3 110 aa16.74■□□□□ 0.27
TSKU-201ENST00000333090 JMJD1CQ15652 2540 aa16.73■□□□□ 0.27
TSKU-201ENST00000333090 CR1P17927 2039 aa16.73■□□□□ 0.27
TSKU-201ENST00000333090 ACANP16112 2415 aa16.73■□□□□ 0.27
TSKU-201ENST00000333090 PF4P02776 101 aa16.73■□□□□ 0.27
TSKU-201ENST00000333090 TMEM126AQ9H061 195 aa16.73■□□□□ 0.27
TSKU-201ENST00000333090 NOP10Q9NPE3 64 aaKnown RBP16.73■□□□□ 0.27
TSKU-201ENST00000333090 IGKV2-28A0A075B6P5 120 aa16.72■□□□□ 0.27
TSKU-201ENST00000333090 IGKV2D-28P01615 120 aa16.72■□□□□ 0.27
TSKU-201ENST00000333090 COX7B2Q8TF08 81 aa16.72■□□□□ 0.27
TSKU-201ENST00000333090 C9orf153Q5TBE3 101 aa16.71■□□□□ 0.27
TSKU-201ENST00000333090 FLNAP21333 2647 aaKnown RBP16.71■□□□□ 0.27
TSKU-201ENST00000333090 DNAL4O96015 105 aa16.71■□□□□ 0.27
TSKU-201ENST00000333090 TENM4Q6N022 2769 aa16.71■□□□□ 0.26
TSKU-201ENST00000333090 C11orf44Q8N8P7 122 aa16.7■□□□□ 0.26
TSKU-201ENST00000333090 LINC00158P58513 81 aa16.7■□□□□ 0.26
TSKU-201ENST00000333090 A0A087WYN8 130 aa16.69■□□□□ 0.26
TSKU-201ENST00000333090 LOC100131303A0A0U1RQF7 123 aa16.69■□□□□ 0.26
TSKU-201ENST00000333090 C3orf22Q8N5N4 141 aa16.69■□□□□ 0.26
TSKU-201ENST00000333090 PPDPFQ9H3Y8 114 aa16.69■□□□□ 0.26
TSKU-201ENST00000333090 SMIM11BQ8TCY0 68 aa16.69■□□□□ 0.26
TSKU-201ENST00000333090 MTORP42345 2549 aa16.68■□□□□ 0.26
TSKU-201ENST00000333090 C5orf38Q86SI9 138 aa16.67■□□□□ 0.26
TSKU-201ENST00000333090 ZNF843Q8N446 348 aa16.67■□□□□ 0.26
TSKU-201ENST00000333090 C9orf129Q5T035 196 aaKnown RBP16.67■□□□□ 0.26
TSKU-201ENST00000333090 TRGV2A0A075B6R0 118 aa16.66■□□□□ 0.26
TSKU-201ENST00000333090 CXCL5P42830 114 aa16.66■□□□□ 0.26
TSKU-201ENST00000333090 A0A1W2PRX2 142 aa16.66■□□□□ 0.26
TSKU-201ENST00000333090 UQCRQO14949 82 aa16.66■□□□□ 0.26
TSKU-201ENST00000333090 C14orf132Q9NPU4 83 aa16.66■□□□□ 0.26
TSKU-201ENST00000333090 ATP5G1P05496 136 aa16.64■□□□□ 0.25
TSKU-201ENST00000333090 CCL18P55774 89 aa16.64■□□□□ 0.25
TSKU-201ENST00000333090 OVOL2Q9BRP0 275 aa16.63■□□□□ 0.25
TSKU-201ENST00000333090 PFN2P35080 140 aa16.63■□□□□ 0.25
TSKU-201ENST00000333090 IGLV4-60A0A075B6I1 120 aa16.62■□□□□ 0.25
TSKU-201ENST00000333090 LINC00526Q96FQ7 95 aa16.61■□□□□ 0.25
TSKU-201ENST00000333090 TRAV25A0A0B4J276 109 aa16.61■□□□□ 0.25
TSKU-201ENST00000333090 LECT2O14960 151 aa16.6■□□□□ 0.25
TSKU-201ENST00000333090 DEFB113Q30KQ7 82 aa16.6■□□□□ 0.25
TSKU-201ENST00000333090 OR13C6PQ8NH95 151 aa16.59■□□□□ 0.25
TSKU-201ENST00000333090 PAX4O43316 350 aa16.59■□□□□ 0.25
TSKU-201ENST00000333090 IGHV3OR16-9A0A0B4J2B5 98 aa16.58■□□□□ 0.25
TSKU-201ENST00000333090 TRGV4A0A0C4DH28 118 aa16.58■□□□□ 0.25
TSKU-201ENST00000333090 H0YGX0 51 aa16.58■□□□□ 0.25
TSKU-201ENST00000333090 ITPR2Q14571 2701 aa16.58■□□□□ 0.24
TSKU-201ENST00000333090 SETXQ7Z333 2677 aaKnown RBP16.58■□□□□ 0.24
TSKU-201ENST00000333090 LRRC75A-AS1Q8N1F1 130 aa16.57■□□□□ 0.24
TSKU-201ENST00000333090 PLAC8L1A1L4L8 177 aa16.57■□□□□ 0.24
TSKU-201ENST00000333090 KLK5Q9Y337 293 aaPredicted RBP16.57■□□□□ 0.24
TSKU-201ENST00000333090 PLA2G2AP14555 144 aa16.56■□□□□ 0.24
TSKU-201ENST00000333090 COX7CP15954 63 aa16.56■□□□□ 0.24
TSKU-201ENST00000333090 WFDC10AQ9H1F0 79 aa16.56■□□□□ 0.24
TSKU-201ENST00000333090 C11orf68Q9H3H3 251 aaKnown RBP16.56■□□□□ 0.24
TSKU-201ENST00000333090 IGKV3D-7A0A0C4DH55 119 aa16.56■□□□□ 0.24
TSKU-201ENST00000333090 IBA57-AS1B1ANH7 110 aa16.56■□□□□ 0.24
TSKU-201ENST00000333090 GIG44P09565 113 aaPredicted RBP16.56■□□□□ 0.24
TSKU-201ENST00000333090 TRBV6-4A0A1B0GX49 114 aa16.55■□□□□ 0.24
TSKU-201ENST00000333090 SLPIP03973 132 aa16.55■□□□□ 0.24
TSKU-201ENST00000333090 NCR3O14931 201 aa16.55■□□□□ 0.24
TSKU-201ENST00000333090 C16orf74Q96GX8 76 aa16.55■□□□□ 0.24
TSKU-201ENST00000333090 LINC00846Q9NV44 126 aa16.55■□□□□ 0.24
TSKU-201ENST00000333090 CCL24O00175 119 aa16.54■□□□□ 0.24
TSKU-201ENST00000333090 RPL35AP18077 110 aaKnown RBP16.54■□□□□ 0.24
TSKU-201ENST00000333090 WFDC11Q8NEX6 87 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 610.3 ms