RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 IGHV3OR16-9A0A0B4J2B5 98 aa13.6□□□□□ -0.23
YBX1-202ENST00000332220 COX7A2LO14548 114 aa13.6□□□□□ -0.23
YBX1-202ENST00000332220 HBDP02042 147 aa13.6□□□□□ -0.23
YBX1-202ENST00000332220 SLPIP03973 132 aa13.6□□□□□ -0.23
YBX1-202ENST00000332220 S100A1P23297 94 aa13.6□□□□□ -0.23
YBX1-202ENST00000332220 IGHV1-58A0A0C4DH39 117 aa13.59□□□□□ -0.23
YBX1-202ENST00000332220 COX6A2Q02221 97 aa13.59□□□□□ -0.23
YBX1-202ENST00000332220 PAPPA-AS1Q5QFB9 102 aa13.59□□□□□ -0.23
YBX1-202ENST00000332220 BAGE3Q86Y29 109 aa13.58□□□□□ -0.24
YBX1-202ENST00000332220 CHCHD1Q96BP2 118 aaKnown RBP13.58□□□□□ -0.24
YBX1-202ENST00000332220 RYR1P21817 5038 aa13.58□□□□□ -0.24
YBX1-202ENST00000332220 HSPG2P98160 4391 aa13.57□□□□□ -0.24
YBX1-202ENST00000332220 MALP21145 153 aa13.57□□□□□ -0.24
YBX1-202ENST00000332220 CNBPP62633 177 aaKnown RBP13.57□□□□□ -0.24
YBX1-202ENST00000332220 PDZD11Q5EBL8 140 aa13.57□□□□□ -0.24
YBX1-202ENST00000332220 LINC00526Q96FQ7 95 aa13.57□□□□□ -0.24
YBX1-202ENST00000332220 LINC00310P59036 64 aa13.56□□□□□ -0.24
YBX1-202ENST00000332220 FAM19A3Q7Z5A8 133 aa13.56□□□□□ -0.24
YBX1-202ENST00000332220 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.55□□□□□ -0.24
YBX1-202ENST00000332220 C9orf163Q8N9P6 203 aa13.55□□□□□ -0.24
YBX1-202ENST00000332220 CDK2AP2O75956 126 aa13.54□□□□□ -0.24
YBX1-202ENST00000332220 FAM30AQ9NZY2 134 aa13.54□□□□□ -0.24
YBX1-202ENST00000332220 SERF1AO75920 110 aa13.53□□□□□ -0.24
YBX1-202ENST00000332220 CST9LQ9H4G1 147 aa13.53□□□□□ -0.24
YBX1-202ENST00000332220 A0A087WZ39 114 aa13.52□□□□□ -0.25
YBX1-202ENST00000332220 A0A0J9YXV3 536 aa13.52□□□□□ -0.25
YBX1-202ENST00000332220 HSBP1O75506 76 aa13.52□□□□□ -0.25
YBX1-202ENST00000332220 PMVKQ15126 192 aa13.52□□□□□ -0.25
YBX1-202ENST00000332220 FAM19A2Q8N3H0 131 aa13.52□□□□□ -0.25
YBX1-202ENST00000332220 IGHV3-64A0A075B6Q5 118 aa13.51□□□□□ -0.25
YBX1-202ENST00000332220 APOMO95445 188 aa13.51□□□□□ -0.25
YBX1-202ENST00000332220 HERC2O95714 4834 aa13.51□□□□□ -0.25
YBX1-202ENST00000332220 IGLV4-69A0A075B6H9 119 aa13.5□□□□□ -0.25
YBX1-202ENST00000332220 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.5□□□□□ -0.25
YBX1-202ENST00000332220 ZNF561-AS1K7EIQ3 104 aa13.5□□□□□ -0.25
YBX1-202ENST00000332220 NUPR1O60356 82 aa13.5□□□□□ -0.25
YBX1-202ENST00000332220 HIST1H2BKO60814 126 aa13.5□□□□□ -0.25
YBX1-202ENST00000332220 HIST1H2BJP06899 126 aa13.5□□□□□ -0.25
YBX1-202ENST00000332220 HIST1H2BOP23527 126 aa13.5□□□□□ -0.25
YBX1-202ENST00000332220 HIST1H2BBP33778 126 aa13.5□□□□□ -0.25
YBX1-202ENST00000332220 XGP55808 180 aa13.5□□□□□ -0.25
YBX1-202ENST00000332220 HIST1H2BDP58876 126 aa13.5□□□□□ -0.25
YBX1-202ENST00000332220 HIST1H2BCP62807 126 aa13.5□□□□□ -0.25
YBX1-202ENST00000332220 HAMPP81172 84 aa13.5□□□□□ -0.25
YBX1-202ENST00000332220 HIST2H2BEQ16778 126 aa13.5□□□□□ -0.25
YBX1-202ENST00000332220 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.5□□□□□ -0.25
YBX1-202ENST00000332220 Q6ZSA8 131 aa13.5□□□□□ -0.25
YBX1-202ENST00000332220 ORAOV1Q8WV07 137 aa13.5□□□□□ -0.25
YBX1-202ENST00000332220 HIST1H2BHQ93079 126 aa13.5□□□□□ -0.25
YBX1-202ENST00000332220 HIST1H2BNQ99877 126 aa13.5□□□□□ -0.25
YBX1-202ENST00000332220 HIST1H2BMQ99879 126 aa13.5□□□□□ -0.25
YBX1-202ENST00000332220 ATP5LO75964 103 aa13.49□□□□□ -0.25
YBX1-202ENST00000332220 HERVK_113P63121 156 aa13.49□□□□□ -0.25
YBX1-202ENST00000332220 SPAG11BQ08648 103 aa13.49□□□□□ -0.25
YBX1-202ENST00000332220 NDUFA6P56556 154 aa13.48□□□□□ -0.25
YBX1-202ENST00000332220 SEC11AP67812 179 aa13.48□□□□□ -0.25
YBX1-202ENST00000332220 OR10D4PQ8NGN7 298 aa13.48□□□□□ -0.25
YBX1-202ENST00000332220 GEMIN7Q9H840 131 aaKnown RBP13.48□□□□□ -0.25
YBX1-202ENST00000332220 CDKN2A-AS1Q9UH64 79 aa13.48□□□□□ -0.25
YBX1-202ENST00000332220 TINCRA0A1B0GVN0 87 aa13.47□□□□□ -0.25
YBX1-202ENST00000332220 SDIM1Q6ZPB5 146 aa13.47□□□□□ -0.25
YBX1-202ENST00000332220 LINC01561Q8N1V8 128 aa13.47□□□□□ -0.25
YBX1-202ENST00000332220 SYCNQ0VAF6 134 aa13.46□□□□□ -0.25
YBX1-202ENST00000332220 CARD19Q96LW7 228 aa13.46□□□□□ -0.25
YBX1-202ENST00000332220 IFI27L1Q96BM0 104 aa13.45□□□□□ -0.26
YBX1-202ENST00000332220 C2orf48Q96LS8 159 aa13.45□□□□□ -0.26
YBX1-202ENST00000332220 KRTAP17-1Q9BYP8 105 aa13.45□□□□□ -0.26
YBX1-202ENST00000332220 IGLV5-45A0A087WSX0 123 aa13.44□□□□□ -0.26
YBX1-202ENST00000332220 KIAA0087Q14695 138 aa13.44□□□□□ -0.26
YBX1-202ENST00000332220 Q6ZRU5 148 aa13.44□□□□□ -0.26
YBX1-202ENST00000332220 LINC00469Q8N7U9 141 aa13.44□□□□□ -0.26
YBX1-202ENST00000332220 CAMK2N2Q96S95 79 aa13.44□□□□□ -0.26
YBX1-202ENST00000332220 IGLC3P0DOY3 106 aa13.43□□□□□ -0.26
YBX1-202ENST00000332220 PANO1I0J062 215 aa13.42□□□□□ -0.26
YBX1-202ENST00000332220 CHAC1Q9BUX1 264 aa13.42□□□□□ -0.26
YBX1-202ENST00000332220 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.42□□□□□ -0.26
YBX1-202ENST00000332220 LEPROTL1O95214 131 aa13.4□□□□□ -0.26
YBX1-202ENST00000332220 SMIM1B2RUZ4 78 aa13.39□□□□□ -0.27
YBX1-202ENST00000332220 CHTF8P0CG12 524 aa13.39□□□□□ -0.27
YBX1-202ENST00000332220 C10orf25Q5T742 122 aa13.39□□□□□ -0.27
YBX1-202ENST00000332220 SCXQ7RTU7 201 aa13.39□□□□□ -0.27
YBX1-202ENST00000332220 PACRGQ96M98 296 aaPredicted RBP13.39□□□□□ -0.27
YBX1-202ENST00000332220 TRAV12-1A0A0B4J245 112 aa13.38□□□□□ -0.27
YBX1-202ENST00000332220 C11orf86A6NJI1 115 aa13.38□□□□□ -0.27
YBX1-202ENST00000332220 FABP4P15090 132 aa13.38□□□□□ -0.27
YBX1-202ENST00000332220 ZNF22P17026 224 aaPredicted RBP13.38□□□□□ -0.27
YBX1-202ENST00000332220 UNQ6190/PRO20217Q6UXQ8 127 aa13.38□□□□□ -0.27
YBX1-202ENST00000332220 TOMM7Q9P0U1 55 aa13.38□□□□□ -0.27
YBX1-202ENST00000332220 CHTOPQ9Y3Y2 248 aaKnown RBP13.38□□□□□ -0.27
YBX1-202ENST00000332220 F8WDY8 70 aa13.37□□□□□ -0.27
YBX1-202ENST00000332220 NDUFA1O15239 70 aa13.37□□□□□ -0.27
YBX1-202ENST00000332220 SPINK8P0C7L1 97 aa13.37□□□□□ -0.27
YBX1-202ENST00000332220 C2orf82Q6UX34 121 aa13.37□□□□□ -0.27
YBX1-202ENST00000332220 A0A096LNI7 61 aa13.36□□□□□ -0.27
YBX1-202ENST00000332220 CIRBPQ14011 172 aaKnown RBP13.36□□□□□ -0.27
YBX1-202ENST00000332220 Q8IZM0 81 aa13.36□□□□□ -0.27
YBX1-202ENST00000332220 CIRBP-AS1Q8TBR5 109 aa13.36□□□□□ -0.27
YBX1-202ENST00000332220 MRPL35Q9NZE8 188 aaKnown RBP13.36□□□□□ -0.27
YBX1-202ENST00000332220 FAT1Q14517 4588 aa13.36□□□□□ -0.27
YBX1-202ENST00000332220 C6orf48Q9UBA6 75 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms