RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 NDUFC2O95298 119 aa17.44■□□□□ 0.38
SOX1-201ENST00000330949 LINC00337Q8N6G1 96 aa17.44■□□□□ 0.38
SOX1-201ENST00000330949 IGSF10Q6WRI0 2623 aa17.44■□□□□ 0.38
SOX1-201ENST00000330949 C10orf99Q6UWK7 81 aa17.43■□□□□ 0.38
SOX1-201ENST00000330949 TLN2Q9Y4G6 2542 aa17.43■□□□□ 0.38
SOX1-201ENST00000330949 MYO9AB2RTY4 2548 aa17.41■□□□□ 0.38
SOX1-201ENST00000330949 FHL2Q14192 279 aa17.41■□□□□ 0.38
SOX1-201ENST00000330949 SMIM11BQ8TCY0 68 aa17.41■□□□□ 0.38
SOX1-201ENST00000330949 IGHV4-30-2A0A087WSY4 118 aa17.41■□□□□ 0.38
SOX1-201ENST00000330949 NOTCH3Q9UM47 2321 aa17.4■□□□□ 0.38
SOX1-201ENST00000330949 MXRA5Q9NR99 2828 aa17.4■□□□□ 0.38
SOX1-201ENST00000330949 SND1-IT1Q9HBX3 110 aa17.4■□□□□ 0.38
SOX1-201ENST00000330949 S100A7L2Q5SY68 101 aa17.4■□□□□ 0.38
SOX1-201ENST00000330949 CCL19Q99731 98 aa17.4■□□□□ 0.38
SOX1-201ENST00000330949 MAPK1IP1LQ8NDC0 245 aa17.39■□□□□ 0.38
SOX1-201ENST00000330949 PIMREGQ9BSJ6 248 aa17.39■□□□□ 0.38
SOX1-201ENST00000330949 IGKV2-28A0A075B6P5 120 aa17.39■□□□□ 0.37
SOX1-201ENST00000330949 IGKV2D-28P01615 120 aa17.39■□□□□ 0.37
SOX1-201ENST00000330949 ABCA12Q86UK0 2595 aa17.38■□□□□ 0.37
SOX1-201ENST00000330949 AVPP01185 164 aa17.38■□□□□ 0.37
SOX1-201ENST00000330949 LRRK2Q5S007 2527 aa17.38■□□□□ 0.37
SOX1-201ENST00000330949 NCR3O14931 201 aa17.37■□□□□ 0.37
SOX1-201ENST00000330949 ATP5EP2Q5VTU8 51 aa17.37■□□□□ 0.37
SOX1-201ENST00000330949 ANKRD17O75179 2603 aaKnown RBP17.37■□□□□ 0.37
SOX1-201ENST00000330949 C10orf105Q8TEF2 133 aa17.37■□□□□ 0.37
SOX1-201ENST00000330949 A6NDX4 124 aa17.36■□□□□ 0.37
SOX1-201ENST00000330949 LECT2O14960 151 aa17.36■□□□□ 0.37
SOX1-201ENST00000330949 CFHR3Q02985 330 aa17.36■□□□□ 0.37
SOX1-201ENST00000330949 MIR7-3HGQ8N6C7 128 aa17.36■□□□□ 0.37
SOX1-201ENST00000330949 GHRHP01286 108 aa17.36■□□□□ 0.37
SOX1-201ENST00000330949 SETD2Q9BYW2 2564 aaPredicted RBP17.35■□□□□ 0.37
SOX1-201ENST00000330949 DOPEY1Q5JWR5 2465 aa17.34■□□□□ 0.37
SOX1-201ENST00000330949 FBN2P35556 2912 aa17.34■□□□□ 0.37
SOX1-201ENST00000330949 CCKP06307 115 aa17.34■□□□□ 0.37
SOX1-201ENST00000330949 RBMY1BA6NDE4 496 aaKnown RBP17.33■□□□□ 0.36
SOX1-201ENST00000330949 RBMY1EA6NEQ0 496 aaKnown RBP17.33■□□□□ 0.36
SOX1-201ENST00000330949 RBMY1DP0C7P1 496 aaKnown RBP17.33■□□□□ 0.36
SOX1-201ENST00000330949 PRM2P04554 102 aa17.32■□□□□ 0.36
SOX1-201ENST00000330949 TMEM243Q9BU79 118 aa17.32■□□□□ 0.36
SOX1-201ENST00000330949 PTPN13Q12923 2485 aa17.32■□□□□ 0.36
SOX1-201ENST00000330949 ORMDL1Q9P0S3 153 aa17.31■□□□□ 0.36
SOX1-201ENST00000330949 PSMB8P28062 276 aa17.29■□□□□ 0.36
SOX1-201ENST00000330949 HILS1P60008 231 aa17.29■□□□□ 0.36
SOX1-201ENST00000330949 FAM236DA0A1B0GTK5 79 aa17.29■□□□□ 0.36
SOX1-201ENST00000330949 IGHV4-59P01825 116 aa17.29■□□□□ 0.36
SOX1-201ENST00000330949 FAM236CP0DP71 79 aa17.29■□□□□ 0.36
SOX1-201ENST00000330949 CDC42SE2Q9NRR3 84 aa17.29■□□□□ 0.36
SOX1-201ENST00000330949 RPL36AP83881 106 aaKnown RBP17.29■□□□□ 0.36
SOX1-201ENST00000330949 RPL36ALQ969Q0 106 aaKnown RBP17.29■□□□□ 0.36
SOX1-201ENST00000330949 Q96MF0 132 aa17.28■□□□□ 0.36
SOX1-201ENST00000330949 USP24Q9UPU5 2620 aa17.28■□□□□ 0.36
SOX1-201ENST00000330949 SONP18583 2426 aaKnown RBP17.28■□□□□ 0.36
SOX1-201ENST00000330949 TRAV23DV6A0A075B6W5 121 aa17.28■□□□□ 0.36
SOX1-201ENST00000330949 MSMBP08118 114 aa17.28■□□□□ 0.36
SOX1-201ENST00000330949 PFN2P35080 140 aa17.28■□□□□ 0.36
SOX1-201ENST00000330949 TEX15Q9BXT5 2789 aa17.27■□□□□ 0.36
SOX1-201ENST00000330949 COX7B2Q8TF08 81 aa17.27■□□□□ 0.35
SOX1-201ENST00000330949 LINC00158P58513 81 aa17.26■□□□□ 0.35
SOX1-201ENST00000330949 C20orf197Q8N268 126 aa17.26■□□□□ 0.35
SOX1-201ENST00000330949 C11orf72Q8NBR9 251 aa17.26■□□□□ 0.35
SOX1-201ENST00000330949 A8MTW9 85 aa17.26■□□□□ 0.35
SOX1-201ENST00000330949 WNK1Q9H4A3 2382 aa17.26■□□□□ 0.35
SOX1-201ENST00000330949 JMJD7-PLA2G4BH0Y9G9 81 aa17.25■□□□□ 0.35
SOX1-201ENST00000330949 CCL18P55774 89 aa17.25■□□□□ 0.35
SOX1-201ENST00000330949 SLPIP03973 132 aa17.25■□□□□ 0.35
SOX1-201ENST00000330949 SS18Q15532 418 aa17.25■□□□□ 0.35
SOX1-201ENST00000330949 PRO0628Q9UI54 55 aa17.24■□□□□ 0.35
SOX1-201ENST00000330949 SERP1Q9Y6X1 66 aa17.24■□□□□ 0.35
SOX1-201ENST00000330949 TRBV10-3A0A0K0K1G6 114 aa17.24■□□□□ 0.35
SOX1-201ENST00000330949 DEFB131AP59861 70 aa17.24■□□□□ 0.35
SOX1-201ENST00000330949 XCL1P47992 114 aa17.23■□□□□ 0.35
SOX1-201ENST00000330949 XCL2Q9UBD3 114 aa17.23■□□□□ 0.35
SOX1-201ENST00000330949 EPM2AB3EWF7 344 aa17.23■□□□□ 0.35
SOX1-201ENST00000330949 LYPD5Q6UWN5 251 aa17.23■□□□□ 0.35
SOX1-201ENST00000330949 DEFB112Q30KQ8 113 aa17.22■□□□□ 0.35
SOX1-201ENST00000330949 ZNF469Q96JG9 3925 aaPredicted RBP17.22■□□□□ 0.35
SOX1-201ENST00000330949 ZNF462Q96JM2 2506 aa17.22■□□□□ 0.35
SOX1-201ENST00000330949 TMEM89A2RUT3 159 aa17.21■□□□□ 0.35
SOX1-201ENST00000330949 ENHOQ6UWT2 76 aa17.21■□□□□ 0.35
SOX1-201ENST00000330949 WFDC9Q8NEX5 89 aa17.21■□□□□ 0.35
SOX1-201ENST00000330949 TOMM7Q9P0U1 55 aa17.21■□□□□ 0.35
SOX1-201ENST00000330949 NAV2Q8IVL1 2488 aa17.21■□□□□ 0.34
SOX1-201ENST00000330949 NTM-AS1Q6ZSK4 140 aa17.2■□□□□ 0.34
SOX1-201ENST00000330949 FAM19A1Q7Z5A9 133 aa17.2■□□□□ 0.34
SOX1-201ENST00000330949 NF1P21359 2839 aa17.2■□□□□ 0.34
SOX1-201ENST00000330949 IBA57-AS1B1ANH7 110 aa17.19■□□□□ 0.34
SOX1-201ENST00000330949 PAX4O43316 350 aa17.19■□□□□ 0.34
SOX1-201ENST00000330949 C2CD3Q4AC94 2353 aa17.18■□□□□ 0.34
SOX1-201ENST00000330949 TRBV10-1A0A0K0K1A3 114 aa17.18■□□□□ 0.34
SOX1-201ENST00000330949 UBL5Q9BZL1 73 aa17.18■□□□□ 0.34
SOX1-201ENST00000330949 CHD6Q8TD26 2715 aa17.17■□□□□ 0.34
SOX1-201ENST00000330949 UBE2L6O14933 153 aa17.16■□□□□ 0.34
SOX1-201ENST00000330949 BCE1O60756 84 aa17.16■□□□□ 0.34
SOX1-201ENST00000330949 DEFB136Q30KP8 78 aa17.16■□□□□ 0.34
SOX1-201ENST00000330949 H7BZZ5 65 aa17.16■□□□□ 0.34
SOX1-201ENST00000330949 LY6G6DO95868 133 aa17.16■□□□□ 0.34
SOX1-201ENST00000330949 LINC00167Q96N53 147 aa17.16■□□□□ 0.34
SOX1-201ENST00000330949 NIPBLQ6KC79 2804 aaeCLIP17.15■□□□□ 0.34
SOX1-201ENST00000330949 CCDC168Q8NDH2 2452 aa17.15■□□□□ 0.34
SOX1-201ENST00000330949 TRBV6-4A0A1B0GX49 114 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms