RNA–Protein interactions for RNA: ENST00000326974.8

KLHDC3-202, Transcript of kelch domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHDC3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-202ENST00000326974 PRO0255Q9UI72 69 aa11.78□□□□□ -0.52
KLHDC3-202ENST00000326974 DNAH3Q8TD57 4116 aa11.78□□□□□ -0.52
KLHDC3-202ENST00000326974 A0A096LPF7 62 aa11.78□□□□□ -0.52
KLHDC3-202ENST00000326974 ATP6V0E2Q8NHE4 81 aa11.78□□□□□ -0.52
KLHDC3-202ENST00000326974 CHCHD5Q9BSY4 110 aa11.78□□□□□ -0.52
KLHDC3-202ENST00000326974 A4D1N5 150 aa11.77□□□□□ -0.53
KLHDC3-202ENST00000326974 RNF183Q96D59 192 aa11.77□□□□□ -0.53
KLHDC3-202ENST00000326974 ANK2Q01484 3957 aa11.77□□□□□ -0.53
KLHDC3-202ENST00000326974 TMEM238C9JI98 176 aa11.76□□□□□ -0.53
KLHDC3-202ENST00000326974 IGKV3OR2-268A0A0C4DH90 116 aa11.75□□□□□ -0.53
KLHDC3-202ENST00000326974 SMAGPQ0VAQ4 97 aa11.75□□□□□ -0.53
KLHDC3-202ENST00000326974 NDUFA1O15239 70 aa11.74□□□□□ -0.53
KLHDC3-202ENST00000326974 PAX4O43316 350 aa11.74□□□□□ -0.53
KLHDC3-202ENST00000326974 MIFP14174 115 aa11.74□□□□□ -0.53
KLHDC3-202ENST00000326974 SFTA2Q6UW10 78 aa11.74□□□□□ -0.53
KLHDC3-202ENST00000326974 DAD1P61803 113 aa11.74□□□□□ -0.53
KLHDC3-202ENST00000326974 C3orf56Q8N813 242 aa11.73□□□□□ -0.53
KLHDC3-202ENST00000326974 SPANXDQ9BXN6 97 aa11.73□□□□□ -0.53
KLHDC3-202ENST00000326974 RETNQ9HD89 108 aa11.73□□□□□ -0.53
KLHDC3-202ENST00000326974 SPANXCQ9NY87 97 aa11.73□□□□□ -0.53
KLHDC3-202ENST00000326974 NPC2P61916 151 aa11.72□□□□□ -0.53
KLHDC3-202ENST00000326974 DAND5Q8N907 189 aa11.72□□□□□ -0.53
KLHDC3-202ENST00000326974 Q9H8V8 135 aa11.72□□□□□ -0.53
KLHDC3-202ENST00000326974 MIAQ16674 131 aa11.72□□□□□ -0.53
KLHDC3-202ENST00000326974 Q8N3U1 123 aa11.7□□□□□ -0.54
KLHDC3-202ENST00000326974 ZNF625Q96I27 306 aaPredicted RBP11.7□□□□□ -0.54
KLHDC3-202ENST00000326974 TRAV26-1A0A087WT03 109 aa11.7□□□□□ -0.54
KLHDC3-202ENST00000326974 H3BMG7 143 aa11.7□□□□□ -0.54
KLHDC3-202ENST00000326974 RBX1P62877 108 aa11.7□□□□□ -0.54
KLHDC3-202ENST00000326974 ATP5G1P05496 136 aa11.69□□□□□ -0.54
KLHDC3-202ENST00000326974 RPL24P83731 157 aaKnown RBP11.69□□□□□ -0.54
KLHDC3-202ENST00000326974 EGFEM1PQ0D2K5 195 aa11.69□□□□□ -0.54
KLHDC3-202ENST00000326974 PRO1854Q9UHT4 67 aa11.69□□□□□ -0.54
KLHDC3-202ENST00000326974 A0A0B4J2C4 111 aa11.68□□□□□ -0.54
KLHDC3-202ENST00000326974 TIMM17BO60830 172 aa11.68□□□□□ -0.54
KLHDC3-202ENST00000326974 IGHV3-33P01772 117 aa11.68□□□□□ -0.54
KLHDC3-202ENST00000326974 PRSS2P07478 247 aa11.68□□□□□ -0.54
KLHDC3-202ENST00000326974 SHISA2Q6UWI4 295 aa11.68□□□□□ -0.54
KLHDC3-202ENST00000326974 MDFIQ99750 246 aa11.68□□□□□ -0.54
KLHDC3-202ENST00000326974 TENM3Q9P273 2699 aa11.68□□□□□ -0.54
KLHDC3-202ENST00000326974 IGHV3OR16-9A0A0B4J2B5 98 aa11.68□□□□□ -0.54
KLHDC3-202ENST00000326974 SPART-AS1P0CW21 52 aa11.68□□□□□ -0.54
KLHDC3-202ENST00000326974 HTN3P15516 51 aa11.68□□□□□ -0.54
KLHDC3-202ENST00000326974 MTURNQ8N3F0 131 aa11.68□□□□□ -0.54
KLHDC3-202ENST00000326974 CLPSL2Q6UWE3 100 aa11.67□□□□□ -0.54
KLHDC3-202ENST00000326974 A0A0U1RRA0 63 aa11.66□□□□□ -0.54
KLHDC3-202ENST00000326974 LINC00959A0A1B0GUT2 108 aa11.66□□□□□ -0.54
KLHDC3-202ENST00000326974 TMEM262E9PQX1 116 aa11.66□□□□□ -0.54
KLHDC3-202ENST00000326974 OCIAD2Q56VL3 154 aa11.66□□□□□ -0.54
KLHDC3-202ENST00000326974 LOC107984156A0A0G2JMH3 177 aa11.66□□□□□ -0.54
KLHDC3-202ENST00000326974 ARL17AQ8IVW1 177 aa11.66□□□□□ -0.54
KLHDC3-202ENST00000326974 PRO0461Q9UI25 63 aa11.66□□□□□ -0.54
KLHDC3-202ENST00000326974 G3V4G9 280 aa11.65□□□□□ -0.54
KLHDC3-202ENST00000326974 A0A1B0GUV1 79 aa11.64□□□□□ -0.55
KLHDC3-202ENST00000326974 H7C2G1 150 aa11.64□□□□□ -0.55
KLHDC3-202ENST00000326974 SOSTDC1Q6X4U4 206 aa11.64□□□□□ -0.55
KLHDC3-202ENST00000326974 C5orf38Q86SI9 138 aa11.64□□□□□ -0.55
KLHDC3-202ENST00000326974 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.64□□□□□ -0.55
KLHDC3-202ENST00000326974 WFDC2Q14508 124 aa11.64□□□□□ -0.55
KLHDC3-202ENST00000326974 COX7B2Q8TF08 81 aa11.63□□□□□ -0.55
KLHDC3-202ENST00000326974 A0A087WZ39 114 aa11.62□□□□□ -0.55
KLHDC3-202ENST00000326974 TCL1BO95988 128 aa11.62□□□□□ -0.55
KLHDC3-202ENST00000326974 LINC00308Q8TCZ7 52 aa11.62□□□□□ -0.55
KLHDC3-202ENST00000326974 TOMM7Q9P0U1 55 aa11.62□□□□□ -0.55
KLHDC3-202ENST00000326974 NOTCH1P46531 2555 aa11.61□□□□□ -0.55
KLHDC3-202ENST00000326974 XCL1P47992 114 aa11.61□□□□□ -0.55
KLHDC3-202ENST00000326974 PSMB2P49721 201 aa11.61□□□□□ -0.55
KLHDC3-202ENST00000326974 ERG28Q9UKR5 140 aa11.6□□□□□ -0.55
KLHDC3-202ENST00000326974 IFITM1P13164 125 aa11.6□□□□□ -0.55
KLHDC3-202ENST00000326974 SMCPP49901 116 aaPredicted RBP11.6□□□□□ -0.55
KLHDC3-202ENST00000326974 MEIG1Q5JSS6 88 aa11.6□□□□□ -0.55
KLHDC3-202ENST00000326974 LINC00269Q8N2A0 174 aa11.59□□□□□ -0.55
KLHDC3-202ENST00000326974 HERV-K104P63124 156 aa11.58□□□□□ -0.55
KLHDC3-202ENST00000326974 CIRBPQ14011 172 aaKnown RBP11.58□□□□□ -0.55
KLHDC3-202ENST00000326974 MRPL23Q16540 153 aaKnown RBP11.58□□□□□ -0.55
KLHDC3-202ENST00000326974 ICOSQ9Y6W8 199 aa11.58□□□□□ -0.55
KLHDC3-202ENST00000326974 F8W1H4 67 aa11.58□□□□□ -0.56
KLHDC3-202ENST00000326974 TEX48A0A1B0GUV7 120 aa11.57□□□□□ -0.56
KLHDC3-202ENST00000326974 TRIAP1O43715 76 aa11.57□□□□□ -0.56
KLHDC3-202ENST00000326974 SS18Q15532 418 aa11.56□□□□□ -0.56
KLHDC3-202ENST00000326974 SH2D6Q7Z4S9 175 aa11.56□□□□□ -0.56
KLHDC3-202ENST00000326974 Q1RN00 199 aa11.56□□□□□ -0.56
KLHDC3-202ENST00000326974 RNF151Q2KHN1 245 aa11.56□□□□□ -0.56
KLHDC3-202ENST00000326974 Q6ZTC4 211 aa11.56□□□□□ -0.56
KLHDC3-202ENST00000326974 C11orf68Q9H3H3 251 aaKnown RBP11.56□□□□□ -0.56
KLHDC3-202ENST00000326974 HUWE1Q7Z6Z7 4374 aaKnown RBP11.56□□□□□ -0.56
KLHDC3-202ENST00000326974 IGLV10-54A0A075B6I4 117 aa11.55□□□□□ -0.56
KLHDC3-202ENST00000326974 ANGP03950 147 aaKnown RBP11.55□□□□□ -0.56
KLHDC3-202ENST00000326974 LELP1Q5T871 98 aa11.55□□□□□ -0.56
KLHDC3-202ENST00000326974 RPL13AP40429 203 aaKnown RBP11.54□□□□□ -0.56
KLHDC3-202ENST00000326974 LYRM7Q5U5X0 104 aa11.54□□□□□ -0.56
KLHDC3-202ENST00000326974 NBEAL1Q6ZS30 2694 aa11.54□□□□□ -0.56
KLHDC3-202ENST00000326974 PRB2P02812 416 aaPredicted RBP11.54□□□□□ -0.56
KLHDC3-202ENST00000326974 SCGB1C2P0DMR2 95 aa11.54□□□□□ -0.56
KLHDC3-202ENST00000326974 REG3AQ06141 175 aa11.54□□□□□ -0.56
KLHDC3-202ENST00000326974 ETDBQ3ZM63 59 aa11.54□□□□□ -0.56
KLHDC3-202ENST00000326974 MIR7-3HGQ8N6C7 128 aa11.53□□□□□ -0.56
KLHDC3-202ENST00000326974 CHCHD10Q8WYQ3 142 aaPredicted RBP11.53□□□□□ -0.56
KLHDC3-202ENST00000326974 TRBV30A0A0K0K1B3 111 aa11.52□□□□□ -0.56
KLHDC3-202ENST00000326974 K7ERU9 68 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms