RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 SMIM26A0A096LP01 95 aa15.29■□□□□ 0.04
RNF40-201ENST00000324685 LINC00242Q5T6M2 205 aa15.28■□□□□ 0.04
RNF40-201ENST00000324685 NUP210LQ5VU65 1888 aa15.27■□□□□ 0.04
RNF40-201ENST00000324685 ZNF843Q8N446 348 aa15.27■□□□□ 0.04
RNF40-201ENST00000324685 MED13LQ71F56 2210 aa15.27■□□□□ 0.03
RNF40-201ENST00000324685 EGFEM1PQ0D2K5 195 aa15.27■□□□□ 0.03
RNF40-201ENST00000324685 M0R2N4 97 aa15.26■□□□□ 0.03
RNF40-201ENST00000324685 PRM2P04554 102 aa15.26■□□□□ 0.03
RNF40-201ENST00000324685 Q8N814 137 aa15.26■□□□□ 0.03
RNF40-201ENST00000324685 CHCHD7Q9BUK0 85 aa15.25■□□□□ 0.03
RNF40-201ENST00000324685 RPL28P46779 137 aaKnown RBP15.25■□□□□ 0.03
RNF40-201ENST00000324685 DSCAML1Q8TD84 2053 aa15.24■□□□□ 0.03
RNF40-201ENST00000324685 NCOA6Q14686 2063 aaPredicted RBP15.24■□□□□ 0.03
RNF40-201ENST00000324685 SMIM1B2RUZ4 78 aa15.24■□□□□ 0.03
RNF40-201ENST00000324685 PLCE1Q9P212 2302 aa15.23■□□□□ 0.03
RNF40-201ENST00000324685 C1orf195Q5TG92 126 aa15.23■□□□□ 0.03
RNF40-201ENST00000324685 LINC00694P0DN24 101 aa15.22■□□□□ 0.03
RNF40-201ENST00000324685 NANOS2P60321 138 aaKnown RBP15.22■□□□□ 0.03
RNF40-201ENST00000324685 M0QXV9 152 aa15.21■□□□□ 0.03
RNF40-201ENST00000324685 UNQ6190/PRO20217Q6UXQ8 127 aa15.2■□□□□ 0.02
RNF40-201ENST00000324685 IGHV4-30-4P0DP06 118 aa15.2■□□□□ 0.02
RNF40-201ENST00000324685 C1orf137Q5JT78 98 aa15.2■□□□□ 0.02
RNF40-201ENST00000324685 CELA1Q9UNI1 258 aa15.2■□□□□ 0.02
RNF40-201ENST00000324685 URB1-AS1Q96HZ7 61 aa15.2■□□□□ 0.02
RNF40-201ENST00000324685 REG3GQ6UW15 175 aa15.19■□□□□ 0.02
RNF40-201ENST00000324685 TNCP24821 2201 aa15.19■□□□□ 0.02
RNF40-201ENST00000324685 TRBV10-3A0A0K0K1G6 114 aa15.18■□□□□ 0.02
RNF40-201ENST00000324685 LINC00310P59036 64 aa15.18■□□□□ 0.02
RNF40-201ENST00000324685 ESRGQ1W209 222 aa15.18■□□□□ 0.02
RNF40-201ENST00000324685 FREM1Q5H8C1 2179 aa15.18■□□□□ 0.02
RNF40-201ENST00000324685 Q6ZVQ6 151 aa15.17■□□□□ 0.02
RNF40-201ENST00000324685 LY6G6CO95867 125 aa15.16■□□□□ 0.02
RNF40-201ENST00000324685 ODF3L2Q3SX64 289 aa15.16■□□□□ 0.02
RNF40-201ENST00000324685 CRIP2P52943 208 aaPredicted RBP15.16■□□□□ 0.02
RNF40-201ENST00000324685 A0A087WYN8 130 aa15.15■□□□□ 0.02
RNF40-201ENST00000324685 COX6A2Q02221 97 aa15.15■□□□□ 0.02
RNF40-201ENST00000324685 F8WDY8 70 aa15.15■□□□□ 0.02
RNF40-201ENST00000324685 LINC00208Q96KT6 92 aa15.15■□□□□ 0.02
RNF40-201ENST00000324685 PRYO14603 147 aa15.14■□□□□ 0.01
RNF40-201ENST00000324685 CSDC2Q9Y534 153 aaKnown RBP15.14■□□□□ 0.01
RNF40-201ENST00000324685 KIAA1549Q9HCM3 1950 aa15.13■□□□□ 0.01
RNF40-201ENST00000324685 AMELXQ99217 191 aa15.13■□□□□ 0.01
RNF40-201ENST00000324685 TSPEAR-AS2P59090 65 aa15.13■□□□□ 0.01
RNF40-201ENST00000324685 C9orf116Q5BN46 136 aaPredicted RBP15.12■□□□□ 0.01
RNF40-201ENST00000324685 HIVEP2P31629 2446 aa15.12■□□□□ 0.01
RNF40-201ENST00000324685 COX8CQ7Z4L0 72 aa15.11■□□□□ 0.01
RNF40-201ENST00000324685 NUPR2A6NF83 97 aa15.11■□□□□ 0.01
RNF40-201ENST00000324685 EDN2P20800 178 aa15.1■□□□□ 0.01
RNF40-201ENST00000324685 C6orf223Q8N319 242 aa15.1■□□□□ 0.01
RNF40-201ENST00000324685 A0A087WVE0 104 aa15.09■□□□□ 0.01
RNF40-201ENST00000324685 MED12LQ86YW9 2145 aa15.09■□□□□ 0.01
RNF40-201ENST00000324685 IGLV4-60A0A075B6I1 120 aa15.09■□□□□ 0.01
RNF40-201ENST00000324685 FHL2Q14192 279 aa15.09■□□□□ 0.01
RNF40-201ENST00000324685 TECTAO75443 2155 aa15.09■□□□□ 0.01
RNF40-201ENST00000324685 BRI3O95415 125 aa15.08■□□□□ 0.01
RNF40-201ENST00000324685 IGLV1-51P01701 117 aa15.08■□□□□ 0.01
RNF40-201ENST00000324685 TRBV7-6A0A0J9YX20 115 aa15.07■□□□□ 0
RNF40-201ENST00000324685 ADAMTSL4-AS1Q5T5F5 129 aa15.07■□□□□ 0
RNF40-201ENST00000324685 COL4A4P53420 1690 aaPredicted RBP15.07■□□□□ 0
RNF40-201ENST00000324685 AVPP01185 164 aa15.06■□□□□ 0
RNF40-201ENST00000324685 IGHV6-1A0A0B4J1U7 121 aa15.06■□□□□ 0
RNF40-201ENST00000324685 OXLD1Q5BKU9 147 aa15.06■□□□□ 0
RNF40-201ENST00000324685 CIRBP-AS1Q8TBR5 109 aa15.05■□□□□ 0
RNF40-201ENST00000324685 FAM208BQ5VWN6 2430 aa15.05■□□□□ -0
RNF40-201ENST00000324685 Q8N3U1 123 aa15.05■□□□□ -0
RNF40-201ENST00000324685 PRR3P79522 188 aaKnown RBP15.04■□□□□ -0
RNF40-201ENST00000324685 SOSTDC1Q6X4U4 206 aa15.04■□□□□ -0
RNF40-201ENST00000324685 LINC01561Q8N1V8 128 aa15.04■□□□□ -0
RNF40-201ENST00000324685 ZNF580Q9UK33 172 aa15.04■□□□□ -0
RNF40-201ENST00000324685 TRBV7-7A0A0K0K1E9 115 aa15.04■□□□□ -0
RNF40-201ENST00000324685 LINC01547P58512 204 aaPredicted RBP15.04■□□□□ -0
RNF40-201ENST00000324685 PRO3102Q9H379 93 aa15.04■□□□□ -0
RNF40-201ENST00000324685 BEAN1Q3B7T3 259 aa15.03■□□□□ -0
RNF40-201ENST00000324685 Q9BRP9 147 aa15.03■□□□□ -0
RNF40-201ENST00000324685 C2orf48Q96LS8 159 aa15.02■□□□□ -0
RNF40-201ENST00000324685 PMAIP1Q13794 54 aa15.02□□□□□ -0.01
RNF40-201ENST00000324685 DSCAMO60469 2012 aa15.02□□□□□ -0.01
RNF40-201ENST00000324685 LINC00575Q6W349 94 aa15.01□□□□□ -0.01
RNF40-201ENST00000324685 A0A1B0GUV1 79 aa15.01□□□□□ -0.01
RNF40-201ENST00000324685 ZFHX2Q9C0A1 2572 aaPredicted RBP15□□□□□ -0.01
RNF40-201ENST00000324685 C16orf95Q9H693 158 aa15□□□□□ -0.01
RNF40-201ENST00000324685 RETNQ9HD89 108 aa15□□□□□ -0.01
RNF40-201ENST00000324685 PTPRQQ9UMZ3 2332 aa15□□□□□ -0.01
RNF40-201ENST00000324685 IGLV5-52A0A0A0MRZ9 124 aa14.99□□□□□ -0.01
RNF40-201ENST00000324685 MUC22E2RYF6 1773 aaPredicted RBP14.98□□□□□ -0.01
RNF40-201ENST00000324685 CDSNQ15517 529 aa14.98□□□□□ -0.01
RNF40-201ENST00000324685 H0Y9P7 68 aa14.98□□□□□ -0.01
RNF40-201ENST00000324685 ATG2AQ2TAZ0 1938 aa14.97□□□□□ -0.01
RNF40-201ENST00000324685 A0A096LNJ9 63 aa14.97□□□□□ -0.01
RNF40-201ENST00000324685 ANKHD1Q8IWZ3 2542 aaKnown RBP14.96□□□□□ -0.01
RNF40-201ENST00000324685 Q6ZTC4 211 aa14.95□□□□□ -0.02
RNF40-201ENST00000324685 PCOTHQ58A44 107 aa14.95□□□□□ -0.02
RNF40-201ENST00000324685 A0A087WSZ3 146 aa14.94□□□□□ -0.02
RNF40-201ENST00000324685 PLA2G2AP14555 144 aa14.93□□□□□ -0.02
RNF40-201ENST00000324685 LINC01556Q5JQF7 62 aa14.93□□□□□ -0.02
RNF40-201ENST00000324685 Q6ZSN1 163 aa14.93□□□□□ -0.02
RNF40-201ENST00000324685 PCDH15Q96QU1 1955 aa14.93□□□□□ -0.02
RNF40-201ENST00000324685 HCG22E2RYF7 251 aa14.93□□□□□ -0.02
RNF40-201ENST00000324685 PCNX3Q9H6A9 2034 aa14.92□□□□□ -0.02
RNF40-201ENST00000324685 TMEM254Q8TBM7 123 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms