RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 RS1O15537 224 aa13.62□□□□□ -0.23
HERPUD2-201ENST00000311350 FAM19A5Q7Z5A7 132 aaPredicted RBP13.62□□□□□ -0.23
HERPUD2-201ENST00000311350 LINC00308Q8TCZ7 52 aa13.62□□□□□ -0.23
HERPUD2-201ENST00000311350 BAALC-AS2P0C853 105 aa13.61□□□□□ -0.23
HERPUD2-201ENST00000311350 C10orf99Q6UWK7 81 aa13.61□□□□□ -0.23
HERPUD2-201ENST00000311350 SOSTDC1Q6X4U4 206 aa13.61□□□□□ -0.23
HERPUD2-201ENST00000311350 FAM218AQ96MZ4 157 aa13.61□□□□□ -0.23
HERPUD2-201ENST00000311350 TIRAPP58753 221 aa13.61□□□□□ -0.23
HERPUD2-201ENST00000311350 C2orf48Q96LS8 159 aa13.61□□□□□ -0.23
HERPUD2-201ENST00000311350 IGHV3-38A0A0C4DH36 116 aa13.6□□□□□ -0.23
HERPUD2-201ENST00000311350 Q6ZSN1 163 aa13.6□□□□□ -0.23
HERPUD2-201ENST00000311350 LINC00467Q9BRT7 94 aa13.6□□□□□ -0.23
HERPUD2-201ENST00000311350 CHCHD7Q9BUK0 85 aa13.6□□□□□ -0.23
HERPUD2-201ENST00000311350 UBE2D4Q9Y2X8 147 aa13.6□□□□□ -0.23
HERPUD2-201ENST00000311350 HOXD3P31249 432 aaPredicted RBP13.59□□□□□ -0.23
HERPUD2-201ENST00000311350 BEAN1Q3B7T3 259 aa13.59□□□□□ -0.23
HERPUD2-201ENST00000311350 C5orf38Q86SI9 138 aa13.59□□□□□ -0.23
HERPUD2-201ENST00000311350 FBN1P35555 2871 aaKnown RBP13.59□□□□□ -0.23
HERPUD2-201ENST00000311350 RBMY1A1P0DJD3 496 aaKnown RBP13.59□□□□□ -0.23
HERPUD2-201ENST00000311350 RBMY1CP0DJD4 496 aa13.59□□□□□ -0.23
HERPUD2-201ENST00000311350 COX6A2Q02221 97 aa13.59□□□□□ -0.23
HERPUD2-201ENST00000311350 RBMY1FQ15415 496 aaKnown RBP13.59□□□□□ -0.23
HERPUD2-201ENST00000311350 GAGE2AQ6NT46 116 aa13.58□□□□□ -0.23
HERPUD2-201ENST00000311350 SDIM1Q6ZPB5 146 aa13.58□□□□□ -0.23
HERPUD2-201ENST00000311350 MDFIQ99750 246 aa13.58□□□□□ -0.23
HERPUD2-201ENST00000311350 hADV29S1A0JD25 119 aa13.58□□□□□ -0.24
HERPUD2-201ENST00000311350 TIMM17BO60830 172 aa13.58□□□□□ -0.24
HERPUD2-201ENST00000311350 COX7CP15954 63 aa13.58□□□□□ -0.24
HERPUD2-201ENST00000311350 ZNF415Q09FC8 603 aa13.58□□□□□ -0.24
HERPUD2-201ENST00000311350 Q9H8V8 135 aa13.58□□□□□ -0.24
HERPUD2-201ENST00000311350 ATRQ13535 2644 aa13.58□□□□□ -0.24
HERPUD2-201ENST00000311350 Q9HAA7 133 aa13.57□□□□□ -0.24
HERPUD2-201ENST00000311350 NDUFA1O15239 70 aa13.57□□□□□ -0.24
HERPUD2-201ENST00000311350 NACAE9PAV3 2078 aa13.56□□□□□ -0.24
HERPUD2-201ENST00000311350 SMIM9A6NGZ8 99 aa13.56□□□□□ -0.24
HERPUD2-201ENST00000311350 ZNF702PQ9H963 129 aa13.56□□□□□ -0.24
HERPUD2-201ENST00000311350 DNHD1Q96M86 4753 aa13.56□□□□□ -0.24
HERPUD2-201ENST00000311350 J3KT08 172 aa13.55□□□□□ -0.24
HERPUD2-201ENST00000311350 PEMTQ9UBM1 199 aa13.55□□□□□ -0.24
HERPUD2-201ENST00000311350 TRAV13-1A0A0B4J241 112 aa13.54□□□□□ -0.24
HERPUD2-201ENST00000311350 C5orf47Q569G3 176 aa13.54□□□□□ -0.24
HERPUD2-201ENST00000311350 MXRA5Q9NR99 2828 aa13.54□□□□□ -0.24
HERPUD2-201ENST00000311350 FSHBP01225 129 aa13.53□□□□□ -0.24
HERPUD2-201ENST00000311350 CIRBPQ14011 172 aaKnown RBP13.53□□□□□ -0.24
HERPUD2-201ENST00000311350 DEFB131AP59861 70 aa13.53□□□□□ -0.24
HERPUD2-201ENST00000311350 C9orf129Q5T035 196 aaKnown RBP13.53□□□□□ -0.24
HERPUD2-201ENST00000311350 KIR2DL5BQ8NHK3 375 aa13.53□□□□□ -0.24
HERPUD2-201ENST00000311350 Q6YL49 198 aa13.52□□□□□ -0.24
HERPUD2-201ENST00000311350 IGLV5-45A0A087WSX0 123 aa13.52□□□□□ -0.25
HERPUD2-201ENST00000311350 IGHV3-53P01767 116 aa13.52□□□□□ -0.25
HERPUD2-201ENST00000311350 CXCL5P42830 114 aa13.52□□□□□ -0.25
HERPUD2-201ENST00000311350 RBMY1BA6NDE4 496 aaKnown RBP13.51□□□□□ -0.25
HERPUD2-201ENST00000311350 RBMY1EA6NEQ0 496 aaKnown RBP13.51□□□□□ -0.25
HERPUD2-201ENST00000311350 RBMY1DP0C7P1 496 aaKnown RBP13.51□□□□□ -0.25
HERPUD2-201ENST00000311350 COL6A5A8TX70 2615 aa13.51□□□□□ -0.25
HERPUD2-201ENST00000311350 CRYGAP11844 174 aa13.51□□□□□ -0.25
HERPUD2-201ENST00000311350 TRACP01848 142 aa13.5□□□□□ -0.25
HERPUD2-201ENST00000311350 ATP5G1P05496 136 aa13.5□□□□□ -0.25
HERPUD2-201ENST00000311350 IGKV3D-7A0A0C4DH55 119 aa13.5□□□□□ -0.25
HERPUD2-201ENST00000311350 HIST1H4AP62805 103 aaKnown RBP13.5□□□□□ -0.25
HERPUD2-201ENST00000311350 A0A1B0GX51 115 aa13.49□□□□□ -0.25
HERPUD2-201ENST00000311350 C11orf72Q8NBR9 251 aa13.49□□□□□ -0.25
HERPUD2-201ENST00000311350 IGHV3OR16-12A0A075B7B8 117 aa13.48□□□□□ -0.25
HERPUD2-201ENST00000311350 A0A087WVE0 104 aa13.48□□□□□ -0.25
HERPUD2-201ENST00000311350 SPATA3Q8NHX4 192 aa13.48□□□□□ -0.25
HERPUD2-201ENST00000311350 MALP21145 153 aa13.47□□□□□ -0.25
HERPUD2-201ENST00000311350 KRTAP24-1Q3LI83 254 aa13.47□□□□□ -0.25
HERPUD2-201ENST00000311350 SLURP1P55000 103 aa13.46□□□□□ -0.25
HERPUD2-201ENST00000311350 LINC00242Q5T6M2 205 aa13.46□□□□□ -0.25
HERPUD2-201ENST00000311350 FAM19A3Q7Z5A8 133 aa13.46□□□□□ -0.25
HERPUD2-201ENST00000311350 IGLV5-39A0A0G2JS06 123 aa13.46□□□□□ -0.26
HERPUD2-201ENST00000311350 C14orf132Q9NPU4 83 aa13.46□□□□□ -0.26
HERPUD2-201ENST00000311350 ATOX1O00244 68 aa13.45□□□□□ -0.26
HERPUD2-201ENST00000311350 OXTP01178 125 aa13.45□□□□□ -0.26
HERPUD2-201ENST00000311350 INSP01308 110 aa13.45□□□□□ -0.26
HERPUD2-201ENST00000311350 MAP6D1Q9H9H5 199 aa13.45□□□□□ -0.26
HERPUD2-201ENST00000311350 DGAT2L7PQ6IED9 249 aa13.45□□□□□ -0.26
HERPUD2-201ENST00000311350 C4orf3Q8WVX3 66 aa13.44□□□□□ -0.26
HERPUD2-201ENST00000311350 SMIM1B2RUZ4 78 aa13.44□□□□□ -0.26
HERPUD2-201ENST00000311350 INAFM2P0DMQ5 153 aa13.44□□□□□ -0.26
HERPUD2-201ENST00000311350 DSCR8Q96T75 97 aa13.43□□□□□ -0.26
HERPUD2-201ENST00000311350 A0A087WYN8 130 aa13.42□□□□□ -0.26
HERPUD2-201ENST00000311350 RPL18AQ02543 176 aaKnown RBP13.42□□□□□ -0.26
HERPUD2-201ENST00000311350 FAM222AQ5U5X8 452 aa13.42□□□□□ -0.26
HERPUD2-201ENST00000311350 COPS9Q8WXC6 57 aa13.42□□□□□ -0.26
HERPUD2-201ENST00000311350 DPH3Q96FX2 82 aa13.42□□□□□ -0.26
HERPUD2-201ENST00000311350 LINC00846Q9NV44 126 aa13.41□□□□□ -0.26
HERPUD2-201ENST00000311350 RPS28P62857 69 aaKnown RBP13.41□□□□□ -0.26
HERPUD2-201ENST00000311350 STAB1Q9NY15 2570 aa13.4□□□□□ -0.26
HERPUD2-201ENST00000311350 HIST2H2BDQ6DRA6 164 aa13.4□□□□□ -0.26
HERPUD2-201ENST00000311350 IL17DQ8TAD2 202 aa13.4□□□□□ -0.26
HERPUD2-201ENST00000311350 DNAL4O96015 105 aa13.39□□□□□ -0.27
HERPUD2-201ENST00000311350 C18orf65Q6ZTR6 163 aa13.39□□□□□ -0.27
HERPUD2-201ENST00000311350 LINC00337Q8N6G1 96 aa13.39□□□□□ -0.27
HERPUD2-201ENST00000311350 DYNLRB2Q8TF09 96 aa13.39□□□□□ -0.27
HERPUD2-201ENST00000311350 UPK3BQ9BT76 320 aa13.39□□□□□ -0.27
HERPUD2-201ENST00000311350 HILS1P60008 231 aa13.39□□□□□ -0.27
HERPUD2-201ENST00000311350 DEFB114Q30KQ6 69 aa13.39□□□□□ -0.27
HERPUD2-201ENST00000311350 DEFB136Q30KP8 78 aa13.38□□□□□ -0.27
HERPUD2-201ENST00000311350 LINC01561Q8N1V8 128 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms