RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 INAFM2P0DMQ5 153 aa5.77□□□□□ -1.48
CHD6-201ENST00000309279 SRSF3P84103 164 aaKnown RBP5.77□□□□□ -1.48
CHD6-201ENST00000309279 LCA10Q71F78 164 aa5.77□□□□□ -1.48
CHD6-201ENST00000309279 TOMM6Q96B49 74 aa5.77□□□□□ -1.48
CHD6-201ENST00000309279 SPCS1Q9Y6A9 102 aa5.77□□□□□ -1.48
CHD6-201ENST00000309279 SERP1Q9Y6X1 66 aa5.77□□□□□ -1.48
CHD6-201ENST00000309279 DYNC2H1Q8NCM8 4307 aaKnown RBP5.77□□□□□ -1.49
CHD6-201ENST00000309279 C19orf71A6NCJ1 209 aa5.77□□□□□ -1.49
CHD6-201ENST00000309279 H3BT86 120 aa5.77□□□□□ -1.49
CHD6-201ENST00000309279 SFTA3P0C7M3 94 aa5.77□□□□□ -1.49
CHD6-201ENST00000309279 CXCL5P42830 114 aa5.77□□□□□ -1.49
CHD6-201ENST00000309279 Q6ZTC4 211 aa5.77□□□□□ -1.49
CHD6-201ENST00000309279 OR10AG1Q8NH19 301 aa5.77□□□□□ -1.49
CHD6-201ENST00000309279 KLK5Q9Y337 293 aaPredicted RBP5.77□□□□□ -1.49
CHD6-201ENST00000309279 LY96Q9Y6Y9 160 aa5.77□□□□□ -1.49
CHD6-201ENST00000309279 COX7A2LO14548 114 aa5.76□□□□□ -1.49
CHD6-201ENST00000309279 CXCL1P09341 107 aa5.76□□□□□ -1.49
CHD6-201ENST00000309279 RNASE3P12724 160 aaKnown RBP5.76□□□□□ -1.49
CHD6-201ENST00000309279 CASC10Q5T4H9 136 aa5.76□□□□□ -1.49
CHD6-201ENST00000309279 SMIM7Q9BQ49 75 aa5.76□□□□□ -1.49
CHD6-201ENST00000309279 TRAV10A0A0B4J240 114 aa5.75□□□□□ -1.49
CHD6-201ENST00000309279 IGLL5B9A064 214 aa5.75□□□□□ -1.49
CHD6-201ENST00000309279 DEFB130BP0DP73 79 aa5.75□□□□□ -1.49
CHD6-201ENST00000309279 DEFB130AP0DP74 79 aa5.75□□□□□ -1.49
CHD6-201ENST00000309279 MGST1P10620 155 aaKnown RBP5.75□□□□□ -1.49
CHD6-201ENST00000309279 LGALS3P17931 250 aaKnown RBP5.75□□□□□ -1.49
CHD6-201ENST00000309279 ELOBQ15370 118 aa5.75□□□□□ -1.49
CHD6-201ENST00000309279 CEMP1Q6PRD7 247 aaPredicted RBP5.75□□□□□ -1.49
CHD6-201ENST00000309279 Q6ZTI0 123 aa5.75□□□□□ -1.49
CHD6-201ENST00000309279 COPS9Q8WXC6 57 aa5.75□□□□□ -1.49
CHD6-201ENST00000309279 PRELID3AQ96N28 172 aa5.75□□□□□ -1.49
CHD6-201ENST00000309279 LYSTQ99698 3801 aa5.75□□□□□ -1.49
CHD6-201ENST00000309279 IL36BQ9NZH7 164 aa5.75□□□□□ -1.49
CHD6-201ENST00000309279 TRGV1A0A0A0MS02 117 aa5.74□□□□□ -1.49
CHD6-201ENST00000309279 A0A1W2PPM0 123 aa5.74□□□□□ -1.49
CHD6-201ENST00000309279 NUPR2A6NF83 97 aa5.74□□□□□ -1.49
CHD6-201ENST00000309279 ZC2HC1BQ5TFG8 222 aa5.74□□□□□ -1.49
CHD6-201ENST00000309279 LINC01545Q5VT33 79 aa5.74□□□□□ -1.49
CHD6-201ENST00000309279 LINC00173Q6ZV60 143 aa5.74□□□□□ -1.49
CHD6-201ENST00000309279 SCRT2Q9NQ03 307 aa5.74□□□□□ -1.49
CHD6-201ENST00000309279 NACAE9PAV3 2078 aa5.74□□□□□ -1.49
CHD6-201ENST00000309279 DEFB131BA0A096LNP1 70 aa5.74□□□□□ -1.49
CHD6-201ENST00000309279 ARMS2P0C7Q2 107 aa5.74□□□□□ -1.49
CHD6-201ENST00000309279 COX7CP15954 63 aa5.74□□□□□ -1.49
CHD6-201ENST00000309279 S100A4P26447 101 aaKnown RBP5.74□□□□□ -1.49
CHD6-201ENST00000309279 LGALS9CQ6DKI2 356 aa5.74□□□□□ -1.49
CHD6-201ENST00000309279 PHF5AQ7RTV0 110 aaKnown RBP5.74□□□□□ -1.49
CHD6-201ENST00000309279 HIST1H4GQ99525 98 aa5.74□□□□□ -1.49
CHD6-201ENST00000309279 TMSB15BA0A087X1C1 80 aa5.73□□□□□ -1.49
CHD6-201ENST00000309279 TRBV27A0A0K0K1C4 114 aa5.73□□□□□ -1.49
CHD6-201ENST00000309279 MSRB1Q9NZV6 116 aa5.73□□□□□ -1.49
CHD6-201ENST00000309279 KMT2CQ8NEZ4 4911 aaKnown RBP5.72□□□□□ -1.49
CHD6-201ENST00000309279 TRGV2A0A075B6R0 118 aa5.72□□□□□ -1.49
CHD6-201ENST00000309279 H3BVH4 76 aa5.72□□□□□ -1.49
CHD6-201ENST00000309279 TMEM256-PLSCR3K7ERE1 68 aa5.72□□□□□ -1.49
CHD6-201ENST00000309279 RPL23P62829 140 aaKnown RBP5.72□□□□□ -1.49
CHD6-201ENST00000309279 HBBP68871 147 aa5.72□□□□□ -1.49
CHD6-201ENST00000309279 ZNF876PQ49A33 203 aa5.72□□□□□ -1.49
CHD6-201ENST00000309279 POM121L12Q8N7R1 296 aa5.72□□□□□ -1.49
CHD6-201ENST00000309279 DSCR8Q96T75 97 aa5.72□□□□□ -1.49
CHD6-201ENST00000309279 TIMM17AQ99595 171 aa5.72□□□□□ -1.49
CHD6-201ENST00000309279 TRBV24-1A0A075B6N3 115 aa5.71□□□□□ -1.5
CHD6-201ENST00000309279 MUC21A0A140T8X8 626 aa5.71□□□□□ -1.5
CHD6-201ENST00000309279 MPV17L2Q567V2 206 aa5.71□□□□□ -1.5
CHD6-201ENST00000309279 RPP21Q9H633 154 aaKnown RBP5.71□□□□□ -1.5
CHD6-201ENST00000309279 OSTCQ9NRP0 149 aa5.71□□□□□ -1.5
CHD6-201ENST00000309279 PHLDA3Q9Y5J5 127 aa5.71□□□□□ -1.5
CHD6-201ENST00000309279 NXPH4O95158 308 aa5.7□□□□□ -1.5
CHD6-201ENST00000309279 TMEM243Q9BU79 118 aa5.7□□□□□ -1.5
CHD6-201ENST00000309279 HHLA3Q9XRX5 114 aa5.7□□□□□ -1.5
CHD6-201ENST00000309279 ZNF706Q9Y5V0 76 aaPredicted RBP5.7□□□□□ -1.5
CHD6-201ENST00000309279 IGHV4-4A0A075B6R2 117 aa5.7□□□□□ -1.5
CHD6-201ENST00000309279 A8MWL6 223 aa5.7□□□□□ -1.5
CHD6-201ENST00000309279 F2Z2F3 143 aa5.7□□□□□ -1.5
CHD6-201ENST00000309279 H3BNG1 76 aa5.7□□□□□ -1.5
CHD6-201ENST00000309279 HTN3P15516 51 aa5.7□□□□□ -1.5
CHD6-201ENST00000309279 SMCPP49901 116 aaPredicted RBP5.7□□□□□ -1.5
CHD6-201ENST00000309279 FHL2Q14192 279 aa5.7□□□□□ -1.5
CHD6-201ENST00000309279 ETDBQ3ZM63 59 aa5.7□□□□□ -1.5
CHD6-201ENST00000309279 CFAP126Q5VTH2 177 aa5.7□□□□□ -1.5
CHD6-201ENST00000309279 CNFNQ9BYD5 112 aa5.7□□□□□ -1.5
CHD6-201ENST00000309279 APLNQ9ULZ1 77 aa5.7□□□□□ -1.5
CHD6-201ENST00000309279 TCL1BO95988 128 aa5.69□□□□□ -1.5
CHD6-201ENST00000309279 REG3AQ06141 175 aa5.69□□□□□ -1.5
CHD6-201ENST00000309279 WFDC2Q14508 124 aa5.69□□□□□ -1.5
CHD6-201ENST00000309279 KIAA0087Q14695 138 aa5.69□□□□□ -1.5
CHD6-201ENST00000309279 ZFP2Q6ZN57 461 aa5.69□□□□□ -1.5
CHD6-201ENST00000309279 GTSF1Q8WW33 167 aa5.69□□□□□ -1.5
CHD6-201ENST00000309279 PPDPFLQ8WWR9 84 aa5.69□□□□□ -1.5
CHD6-201ENST00000309279 GFRA4Q9GZZ7 299 aa5.69□□□□□ -1.5
CHD6-201ENST00000309279 V9GYV3 84 aa5.69□□□□□ -1.5
CHD6-201ENST00000309279 TRBV7-7A0A0K0K1E9 115 aa5.68□□□□□ -1.5
CHD6-201ENST00000309279 IGHV3-53P01767 116 aa5.68□□□□□ -1.5
CHD6-201ENST00000309279 NPC2P61916 151 aa5.68□□□□□ -1.5
CHD6-201ENST00000309279 PMCHL1Q16048 86 aa5.68□□□□□ -1.5
CHD6-201ENST00000309279 LYZL1Q6UWQ5 148 aa5.68□□□□□ -1.5
CHD6-201ENST00000309279 FP248Q71RG6 208 aaPredicted RBP5.68□□□□□ -1.5
CHD6-201ENST00000309279 C15orf53Q8NAA6 179 aa5.68□□□□□ -1.5
CHD6-201ENST00000309279 C18orf32Q8TCD1 76 aa5.68□□□□□ -1.5
CHD6-201ENST00000309279 TSKUQ8WUA8 353 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms