RNA–Protein interactions for RNA: ENST00000308008.10

RAPGEF6-202, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF6, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-202ENST00000308008 HIVEP2P31629 2446 aa2.33□□□□□ -2.04
RAPGEF6-202ENST00000308008 TRGV1A0A0A0MS02 117 aa2.33□□□□□ -2.04
RAPGEF6-202ENST00000308008 IGHV1-3A0A0C4DH29 117 aa2.33□□□□□ -2.04
RAPGEF6-202ENST00000308008 IGIPA6NJ69 53 aa2.33□□□□□ -2.04
RAPGEF6-202ENST00000308008 CGB3P0DN86 165 aa2.33□□□□□ -2.04
RAPGEF6-202ENST00000308008 CGB7P0DN87 165 aa2.33□□□□□ -2.04
RAPGEF6-202ENST00000308008 PRB3Q04118 309 aaPredicted RBP2.33□□□□□ -2.04
RAPGEF6-202ENST00000308008 S100A7L2Q5SY68 101 aa2.33□□□□□ -2.04
RAPGEF6-202ENST00000308008 ZNRD1Q9P1U0 126 aa2.33□□□□□ -2.04
RAPGEF6-202ENST00000308008 FASNP49327 2511 aaKnown RBP2.33□□□□□ -2.04
RAPGEF6-202ENST00000308008 TRAV12-1A0A0B4J245 112 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 TRBV30A0A0K0K1B3 111 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 F8WEM9 126 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 UBE2AP49459 152 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 WT1-ASQ06250 92 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 C9orf66Q5T8R8 295 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 Q8NBF4 154 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 WFDC11Q8NEX6 87 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 CCDC168Q8NDH2 2452 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 F8VRH5 84 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 PSPHP1O15172 72 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 SYNJ2BPP57105 145 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 NANOS2P60321 138 aaKnown RBP2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 CLEC2BQ92478 149 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 SPANXCQ9NY87 97 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 EPG5Q9HCE0 2579 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 PTPN13Q12923 2485 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 TRRAPQ9Y4A5 3859 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 IGKV3D-20A0A0C4DH25 116 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 H3BMM0 161 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 LINC00158P58513 81 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 ZNF876PQ49A33 203 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 C10orf55Q5SWW7 151 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 UBE2WQ96B02 151 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 TIMM21Q9BVV7 248 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 OTOGLQ3ZCN5 2332 aa2.32□□□□□ -2.04
RAPGEF6-202ENST00000308008 TRAV13-1A0A0B4J241 112 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 C11orf86A6NJI1 115 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 PRB1P04280 392 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 CXCL5P42830 114 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 RHPN1-AS1Q9BWJ2 59 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 IGHV3OR16-9A0A0B4J2B5 98 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 A6NDX4 124 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 BUB1B-PAK6H3BSN5 160 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 LST1O00453 97 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 Q8N9W7 124 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 RMI2Q96E14 147 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 MUC4Q99102 2169 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 A0A0B4J2C4 111 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 IGHV7-4-1A0A0J9YVY3 117 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 E7EQL1 145 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 IGHV1-69P01742 117 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 DEFB130BP0DP73 79 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 DEFB130AP0DP74 79 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 DEFB131AP59861 70 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 C17orf58Q2M2W7 97 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 NDUFA4L2Q9NRX3 87 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 USP24Q9UPU5 2620 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 SORL1Q92673 2214 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 C11orf71Q6IPW1 123 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 MUSTN1Q8IVN3 82 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 LYPD1Q8N2G4 141 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 TOMM6Q96B49 74 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 GAFA1Q96PS6 74 aa2.31□□□□□ -2.04
RAPGEF6-202ENST00000308008 TRAV12-3A0A0B4J271 114 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 DNAJC9-AS1A6NH13 148 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 FSHBP01225 129 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 IGHV3-53P01767 116 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 TRACP01848 142 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 RPL28P46779 137 aaKnown RBP2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 LINC00643Q86TS7 51 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 OBSCN-AS1Q96MR7 158 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 UBE2D4Q9Y2X8 147 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 MAST4O15021 2626 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 DNAH6Q9C0G6 4158 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 IGLV7-46A0A075B6I9 117 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 I3L3M4 83 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 ATXN8Q156A1 80 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 C2orf66Q6UXQ4 117 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 GPHB5Q86YW7 130 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 C1orf158Q8N1D5 194 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 IGHV4-30-2A0A087WSY4 118 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 IGKV2-40A0A087WW87 121 aaPredicted RBP2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 KRTAP16-1A8MUX0 517 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 LY6HO94772 140 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 IGKV2D-40P01614 121 aaPredicted RBP2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 PRR3P79522 188 aaKnown RBP2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 PDE6HQ13956 83 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 SERP2Q8N6R1 65 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 LAMTOR3Q9UHA4 124 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 FBN3Q75N90 2809 aa2.3□□□□□ -2.04
RAPGEF6-202ENST00000308008 NACAE9PAV3 2078 aa2.29□□□□□ -2.04
RAPGEF6-202ENST00000308008 SH2D1AO60880 128 aa2.29□□□□□ -2.04
RAPGEF6-202ENST00000308008 NDPQ00604 133 aa2.29□□□□□ -2.04
RAPGEF6-202ENST00000308008 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.29□□□□□ -2.04
RAPGEF6-202ENST00000308008 SND1-IT1Q9HBX3 110 aa2.29□□□□□ -2.04
RAPGEF6-202ENST00000308008 LINC00846Q9NV44 126 aa2.29□□□□□ -2.04
RAPGEF6-202ENST00000308008 IGKV1D-17A0A075B6S4 117 aa2.29□□□□□ -2.04
RAPGEF6-202ENST00000308008 H3BT86 120 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms