RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 LY6G6DO95868 133 aa11.14□□□□□ -0.63
CHAF1A-201ENST00000301280 LINC00158P58513 81 aa11.14□□□□□ -0.63
CHAF1A-201ENST00000301280 NTN5Q8WTR8 489 aaPredicted RBP11.14□□□□□ -0.63
CHAF1A-201ENST00000301280 IGHV1-58A0A0C4DH39 117 aa11.14□□□□□ -0.63
CHAF1A-201ENST00000301280 VSIG2Q96IQ7 327 aa11.13□□□□□ -0.63
CHAF1A-201ENST00000301280 PPDPFLQ8WWR9 84 aa11.12□□□□□ -0.63
CHAF1A-201ENST00000301280 LINC00526Q96FQ7 95 aa11.12□□□□□ -0.63
CHAF1A-201ENST00000301280 SLC25A20O43772 301 aa11.12□□□□□ -0.63
CHAF1A-201ENST00000301280 TMEM243Q9BU79 118 aa11.12□□□□□ -0.63
CHAF1A-201ENST00000301280 PYGO1Q9Y3Y4 419 aa11.12□□□□□ -0.63
CHAF1A-201ENST00000301280 GYPEP15421 78 aa11.12□□□□□ -0.63
CHAF1A-201ENST00000301280 Q8N3U1 123 aa11.12□□□□□ -0.63
CHAF1A-201ENST00000301280 TMEM263Q8WUH6 116 aaKnown RBP11.12□□□□□ -0.63
CHAF1A-201ENST00000301280 IGLV4-60A0A075B6I1 120 aa11.11□□□□□ -0.63
CHAF1A-201ENST00000301280 RNASE1P07998 156 aaKnown RBP11.11□□□□□ -0.63
CHAF1A-201ENST00000301280 CIRBPQ14011 172 aaKnown RBP11.11□□□□□ -0.63
CHAF1A-201ENST00000301280 RNF183Q96D59 192 aa11.11□□□□□ -0.63
CHAF1A-201ENST00000301280 TRIAP1O43715 76 aa11.11□□□□□ -0.63
CHAF1A-201ENST00000301280 IGHV3-33P01772 117 aa11.11□□□□□ -0.63
CHAF1A-201ENST00000301280 LINC00242Q5T6M2 205 aa11.11□□□□□ -0.63
CHAF1A-201ENST00000301280 RS1O15537 224 aa11.1□□□□□ -0.63
CHAF1A-201ENST00000301280 TEX49A0A1B0GTD5 131 aa11.09□□□□□ -0.63
CHAF1A-201ENST00000301280 LYRM7Q5U5X0 104 aa11.09□□□□□ -0.63
CHAF1A-201ENST00000301280 BAHCC1Q9P281 2608 aa11.09□□□□□ -0.63
CHAF1A-201ENST00000301280 TMEM86BQ8N661 226 aa11.09□□□□□ -0.63
CHAF1A-201ENST00000301280 SPANXA1Q9NS26 97 aa11.09□□□□□ -0.63
CHAF1A-201ENST00000301280 MRPS36P82909 103 aaKnown RBP11.08□□□□□ -0.64
CHAF1A-201ENST00000301280 GIG44P09565 113 aaPredicted RBP11.08□□□□□ -0.64
CHAF1A-201ENST00000301280 BEAN1Q3B7T3 259 aa11.07□□□□□ -0.64
CHAF1A-201ENST00000301280 C2orf82Q6UX34 121 aa11.07□□□□□ -0.64
CHAF1A-201ENST00000301280 IL17DQ8TAD2 202 aa11.07□□□□□ -0.64
CHAF1A-201ENST00000301280 KRTAP10-3P60369 221 aa11.07□□□□□ -0.64
CHAF1A-201ENST00000301280 KRTAP1-1Q07627 177 aa11.07□□□□□ -0.64
CHAF1A-201ENST00000301280 TRBV20-1A0A075B6N2 111 aa11.07□□□□□ -0.64
CHAF1A-201ENST00000301280 F5H768 121 aa11.07□□□□□ -0.64
CHAF1A-201ENST00000301280 COX6CP09669 75 aa11.07□□□□□ -0.64
CHAF1A-201ENST00000301280 NHLRC4P0CG21 123 aaPredicted RBP11.06□□□□□ -0.64
CHAF1A-201ENST00000301280 C6orf226Q5I0X4 101 aa11.06□□□□□ -0.64
CHAF1A-201ENST00000301280 PAX4O43316 350 aa11.05□□□□□ -0.64
CHAF1A-201ENST00000301280 FAM222AQ5U5X8 452 aa11.05□□□□□ -0.64
CHAF1A-201ENST00000301280 LITAFQ99732 161 aa11.05□□□□□ -0.64
CHAF1A-201ENST00000301280 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.05□□□□□ -0.64
CHAF1A-201ENST00000301280 TINCRA0A1B0GVN0 87 aa11.05□□□□□ -0.64
CHAF1A-201ENST00000301280 CITED1Q99966 193 aa11.05□□□□□ -0.64
CHAF1A-201ENST00000301280 FAM110AQ9BQ89 295 aa11.05□□□□□ -0.64
CHAF1A-201ENST00000301280 Q9HAA7 133 aa11.04□□□□□ -0.64
CHAF1A-201ENST00000301280 ICOSQ9Y6W8 199 aa11.04□□□□□ -0.64
CHAF1A-201ENST00000301280 IGLV1-51P01701 117 aa11.04□□□□□ -0.64
CHAF1A-201ENST00000301280 TRAV4A0A0B4J268 109 aa11.04□□□□□ -0.64
CHAF1A-201ENST00000301280 MIR7-3HGQ8N6C7 128 aa11.03□□□□□ -0.64
CHAF1A-201ENST00000301280 DNAJC30Q96LL9 226 aa11.03□□□□□ -0.64
CHAF1A-201ENST00000301280 ANK3Q12955 4377 aaKnown RBP11.03□□□□□ -0.64
CHAF1A-201ENST00000301280 HERVK_113P63121 156 aa11.03□□□□□ -0.64
CHAF1A-201ENST00000301280 PRB2P02812 416 aaPredicted RBP11.02□□□□□ -0.64
CHAF1A-201ENST00000301280 LINC01620Q4KN68 170 aa11.02□□□□□ -0.64
CHAF1A-201ENST00000301280 C16orf74Q96GX8 76 aa11.02□□□□□ -0.64
CHAF1A-201ENST00000301280 ANGP03950 147 aaKnown RBP11.02□□□□□ -0.65
CHAF1A-201ENST00000301280 HILS1P60008 231 aa11.02□□□□□ -0.65
CHAF1A-201ENST00000301280 TENM3Q9P273 2699 aa11.02□□□□□ -0.65
CHAF1A-201ENST00000301280 ATP5G1P05496 136 aa11.02□□□□□ -0.65
CHAF1A-201ENST00000301280 MIAQ16674 131 aa11.02□□□□□ -0.65
CHAF1A-201ENST00000301280 LINC01600Q96MT4 127 aa11.02□□□□□ -0.65
CHAF1A-201ENST00000301280 PRR3P79522 188 aaKnown RBP11.01□□□□□ -0.65
CHAF1A-201ENST00000301280 CDC42SE2Q9NRR3 84 aa11.01□□□□□ -0.65
CHAF1A-201ENST00000301280 SMIM1B2RUZ4 78 aa11.01□□□□□ -0.65
CHAF1A-201ENST00000301280 ATXN8Q156A1 80 aa11.01□□□□□ -0.65
CHAF1A-201ENST00000301280 TRAV25A0A0B4J276 109 aa11.01□□□□□ -0.65
CHAF1A-201ENST00000301280 DAZ2Q13117 558 aaKnown RBP11□□□□□ -0.65
CHAF1A-201ENST00000301280 OXLD1Q5BKU9 147 aa11□□□□□ -0.65
CHAF1A-201ENST00000301280 FAM19A3Q7Z5A8 133 aa11□□□□□ -0.65
CHAF1A-201ENST00000301280 DAZ4Q86SG3 579 aaKnown RBP11□□□□□ -0.65
CHAF1A-201ENST00000301280 DAZ3Q9NR90 486 aaKnown RBP11□□□□□ -0.65
CHAF1A-201ENST00000301280 A0A0B4J2C4 111 aa11□□□□□ -0.65
CHAF1A-201ENST00000301280 TEX29Q8N6K0 151 aa11□□□□□ -0.65
CHAF1A-201ENST00000301280 LINC00308Q8TCZ7 52 aa11□□□□□ -0.65
CHAF1A-201ENST00000301280 M0QXV9 152 aa10.99□□□□□ -0.65
CHAF1A-201ENST00000301280 TTC32Q5I0X7 151 aa10.99□□□□□ -0.65
CHAF1A-201ENST00000301280 ZFAND6Q6FIF0 208 aa10.99□□□□□ -0.65
CHAF1A-201ENST00000301280 SOSTDC1Q6X4U4 206 aa10.99□□□□□ -0.65
CHAF1A-201ENST00000301280 SS18L2Q9UHA2 77 aa10.99□□□□□ -0.65
CHAF1A-201ENST00000301280 C9orf116Q5BN46 136 aaPredicted RBP10.98□□□□□ -0.65
CHAF1A-201ENST00000301280 LINC00269Q8N2A0 174 aa10.98□□□□□ -0.65
CHAF1A-201ENST00000301280 ANAPC13Q9BS18 74 aa10.98□□□□□ -0.65
CHAF1A-201ENST00000301280 DAD1P61803 113 aa10.98□□□□□ -0.65
CHAF1A-201ENST00000301280 RETNQ9HD89 108 aa10.98□□□□□ -0.65
CHAF1A-201ENST00000301280 IGLV5-45A0A087WSX0 123 aa10.97□□□□□ -0.65
CHAF1A-201ENST00000301280 FHL2Q14192 279 aa10.97□□□□□ -0.65
CHAF1A-201ENST00000301280 TRBV6-8A0A0A6YYG3 113 aa10.97□□□□□ -0.65
CHAF1A-201ENST00000301280 MALP21145 153 aa10.96□□□□□ -0.66
CHAF1A-201ENST00000301280 PLAC8L1A1L4L8 177 aa10.96□□□□□ -0.66
CHAF1A-201ENST00000301280 SLPIP03973 132 aa10.96□□□□□ -0.66
CHAF1A-201ENST00000301280 COX7B2Q8TF08 81 aa10.95□□□□□ -0.66
CHAF1A-201ENST00000301280 C19orf73Q9NVV2 129 aa10.95□□□□□ -0.66
CHAF1A-201ENST00000301280 H7C423 109 aa10.95□□□□□ -0.66
CHAF1A-201ENST00000301280 B5MCH6 92 aa10.94□□□□□ -0.66
CHAF1A-201ENST00000301280 SND1-IT1Q9HBX3 110 aa10.94□□□□□ -0.66
CHAF1A-201ENST00000301280 TRBV10-1A0A0K0K1A3 114 aa10.94□□□□□ -0.66
CHAF1A-201ENST00000301280 SPANXDQ9BXN6 97 aa10.94□□□□□ -0.66
CHAF1A-201ENST00000301280 SPANXCQ9NY87 97 aa10.94□□□□□ -0.66
CHAF1A-201ENST00000301280 TRBV30A0A0K0K1B3 111 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms