RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 SCGB1D4Q6XE38 83 aa10.81□□□□□ -0.68
HERPUD1-201ENST00000300302 TRAV8-3A0A0A6YYJ7 113 aa10.81□□□□□ -0.68
HERPUD1-201ENST00000300302 LINC00959A0A1B0GUT2 108 aa10.79□□□□□ -0.68
HERPUD1-201ENST00000300302 CCL25O15444 150 aa10.79□□□□□ -0.68
HERPUD1-201ENST00000300302 ANGP03950 147 aaKnown RBP10.79□□□□□ -0.68
HERPUD1-201ENST00000300302 SS18Q15532 418 aa10.79□□□□□ -0.68
HERPUD1-201ENST00000300302 TAL2Q16559 108 aa10.78□□□□□ -0.68
HERPUD1-201ENST00000300302 C15orf53Q8NAA6 179 aa10.78□□□□□ -0.68
HERPUD1-201ENST00000300302 LINC00269Q8N2A0 174 aa10.77□□□□□ -0.69
HERPUD1-201ENST00000300302 DNAH9Q9NYC9 4486 aa10.77□□□□□ -0.69
HERPUD1-201ENST00000300302 IGLV5-39A0A0G2JS06 123 aa10.76□□□□□ -0.69
HERPUD1-201ENST00000300302 HIST1H4GQ99525 98 aa10.76□□□□□ -0.69
HERPUD1-201ENST00000300302 SMIM1B2RUZ4 78 aa10.76□□□□□ -0.69
HERPUD1-201ENST00000300302 IGHV3OR16-9A0A0B4J2B5 98 aa10.75□□□□□ -0.69
HERPUD1-201ENST00000300302 NHLRC4P0CG21 123 aaPredicted RBP10.75□□□□□ -0.69
HERPUD1-201ENST00000300302 REG3AQ06141 175 aa10.75□□□□□ -0.69
HERPUD1-201ENST00000300302 ZFAND6Q6FIF0 208 aa10.75□□□□□ -0.69
HERPUD1-201ENST00000300302 CLPSL2Q6UWE3 100 aa10.75□□□□□ -0.69
HERPUD1-201ENST00000300302 ORAOV1Q8WV07 137 aa10.75□□□□□ -0.69
HERPUD1-201ENST00000300302 NDUFA12Q9UI09 145 aa10.75□□□□□ -0.69
HERPUD1-201ENST00000300302 GCSHP23434 173 aa10.74□□□□□ -0.69
HERPUD1-201ENST00000300302 ESRGQ1W209 222 aa10.74□□□□□ -0.69
HERPUD1-201ENST00000300302 Q8N3U1 123 aa10.74□□□□□ -0.69
HERPUD1-201ENST00000300302 CEND1Q8N111 149 aa10.74□□□□□ -0.69
HERPUD1-201ENST00000300302 A0A087WZ39 114 aa10.73□□□□□ -0.69
HERPUD1-201ENST00000300302 A6NDN8 102 aa10.73□□□□□ -0.69
HERPUD1-201ENST00000300302 TAX1BP3O14907 124 aa10.73□□□□□ -0.69
HERPUD1-201ENST00000300302 XCL1P47992 114 aa10.73□□□□□ -0.69
HERPUD1-201ENST00000300302 SRSF9Q13242 221 aaKnown RBP eCLIP10.73□□□□□ -0.69
HERPUD1-201ENST00000300302 Q6ZVH6 145 aa10.73□□□□□ -0.69
HERPUD1-201ENST00000300302 TM2D2Q9BX73 214 aa10.72□□□□□ -0.69
HERPUD1-201ENST00000300302 SPANXB1Q9NS25 103 aaPredicted RBP10.72□□□□□ -0.69
HERPUD1-201ENST00000300302 COX11Q9Y6N1 276 aa10.72□□□□□ -0.69
HERPUD1-201ENST00000300302 WFDC10BQ8IUB3 73 aa10.72□□□□□ -0.69
HERPUD1-201ENST00000300302 C10orf126Q8N4M7 172 aa10.72□□□□□ -0.69
HERPUD1-201ENST00000300302 A0A0J9YXY3 114 aa10.71□□□□□ -0.69
HERPUD1-201ENST00000300302 NDUFA1O15239 70 aa10.71□□□□□ -0.69
HERPUD1-201ENST00000300302 PTTG1IPP53801 180 aa10.71□□□□□ -0.69
HERPUD1-201ENST00000300302 PRR34Q9NV39 138 aa10.71□□□□□ -0.69
HERPUD1-201ENST00000300302 KLK12Q9UKR0 248 aa10.71□□□□□ -0.69
HERPUD1-201ENST00000300302 TMEM238C9JI98 176 aa10.7□□□□□ -0.7
HERPUD1-201ENST00000300302 IGHV3-30P01768 117 aa10.7□□□□□ -0.7
HERPUD1-201ENST00000300302 IGHV3-33P01772 117 aa10.7□□□□□ -0.7
HERPUD1-201ENST00000300302 IGHV3-30-5P0DP03 117 aa10.7□□□□□ -0.7
HERPUD1-201ENST00000300302 CD164L2Q6UWJ8 174 aa10.7□□□□□ -0.7
HERPUD1-201ENST00000300302 CHCHD10Q8WYQ3 142 aaPredicted RBP10.7□□□□□ -0.7
HERPUD1-201ENST00000300302 IGLL5B9A064 214 aa10.7□□□□□ -0.7
HERPUD1-201ENST00000300302 CRPP02741 224 aa10.7□□□□□ -0.7
HERPUD1-201ENST00000300302 C5orf38Q86SI9 138 aa10.7□□□□□ -0.7
HERPUD1-201ENST00000300302 LINC01561Q8N1V8 128 aa10.7□□□□□ -0.7
HERPUD1-201ENST00000300302 FXYD2P54710 66 aa10.68□□□□□ -0.7
HERPUD1-201ENST00000300302 COX7B2Q8TF08 81 aa10.68□□□□□ -0.7
HERPUD1-201ENST00000300302 Q9H8V8 135 aa10.68□□□□□ -0.7
HERPUD1-201ENST00000300302 IGLV10-54A0A075B6I4 117 aa10.68□□□□□ -0.7
HERPUD1-201ENST00000300302 CCL18P55774 89 aa10.68□□□□□ -0.7
HERPUD1-201ENST00000300302 PRKDCP78527 4128 aaKnown RBP10.67□□□□□ -0.7
HERPUD1-201ENST00000300302 TRAV8-4A0A0B4J246 113 aa10.67□□□□□ -0.7
HERPUD1-201ENST00000300302 TMEM238LA0A1B0GVL6 79 aa10.67□□□□□ -0.7
HERPUD1-201ENST00000300302 A6NJY4 79 aa10.67□□□□□ -0.7
HERPUD1-201ENST00000300302 COX7A2LO14548 114 aa10.67□□□□□ -0.7
HERPUD1-201ENST00000300302 HERV-K104P63124 156 aa10.67□□□□□ -0.7
HERPUD1-201ENST00000300302 LINC01556Q5JQF7 62 aa10.67□□□□□ -0.7
HERPUD1-201ENST00000300302 TOMM7Q9P0U1 55 aa10.67□□□□□ -0.7
HERPUD1-201ENST00000300302 K7EP13 123 aa10.66□□□□□ -0.7
HERPUD1-201ENST00000300302 CIRBPQ14011 172 aaKnown RBP10.66□□□□□ -0.7
HERPUD1-201ENST00000300302 ENHOQ6UWT2 76 aa10.66□□□□□ -0.7
HERPUD1-201ENST00000300302 MEGF8Q7Z7M0 2845 aa10.66□□□□□ -0.7
HERPUD1-201ENST00000300302 TIMM17BO60830 172 aa10.66□□□□□ -0.7
HERPUD1-201ENST00000300302 SFTA2Q6UW10 78 aa10.66□□□□□ -0.7
HERPUD1-201ENST00000300302 UBE2WQ96B02 151 aa10.66□□□□□ -0.7
HERPUD1-201ENST00000300302 ZNF625Q96I27 306 aaPredicted RBP10.66□□□□□ -0.7
HERPUD1-201ENST00000300302 MALP21145 153 aa10.65□□□□□ -0.7
HERPUD1-201ENST00000300302 MIAQ16674 131 aa10.65□□□□□ -0.7
HERPUD1-201ENST00000300302 PRSS2P07478 247 aa10.64□□□□□ -0.71
HERPUD1-201ENST00000300302 SMIM13P0DJ93 91 aa10.64□□□□□ -0.71
HERPUD1-201ENST00000300302 NHP2Q9NX24 153 aaKnown RBP10.64□□□□□ -0.71
HERPUD1-201ENST00000300302 COL7A1Q02388 2944 aa10.64□□□□□ -0.71
HERPUD1-201ENST00000300302 DNAH10OSP0CZ25 163 aa10.64□□□□□ -0.71
HERPUD1-201ENST00000300302 FOXI1Q12951 378 aa10.64□□□□□ -0.71
HERPUD1-201ENST00000300302 LITAFQ99732 161 aa10.64□□□□□ -0.71
HERPUD1-201ENST00000300302 LINC00588Q9Y4M8 146 aa10.64□□□□□ -0.71
HERPUD1-201ENST00000300302 GAGE12HA6NDE8 117 aa10.63□□□□□ -0.71
HERPUD1-201ENST00000300302 C6orf226Q5I0X4 101 aa10.63□□□□□ -0.71
HERPUD1-201ENST00000300302 Q8IZM0 81 aa10.63□□□□□ -0.71
HERPUD1-201ENST00000300302 SPANXDQ9BXN6 97 aa10.63□□□□□ -0.71
HERPUD1-201ENST00000300302 SPANXCQ9NY87 97 aa10.63□□□□□ -0.71
HERPUD1-201ENST00000300302 APOMO95445 188 aa10.61□□□□□ -0.71
HERPUD1-201ENST00000300302 RPL24P83731 157 aaKnown RBP10.61□□□□□ -0.71
HERPUD1-201ENST00000300302 MEIG1Q5JSS6 88 aa10.61□□□□□ -0.71
HERPUD1-201ENST00000300302 C9orf118A6NHY6 69 aa10.6□□□□□ -0.71
HERPUD1-201ENST00000300302 ADAMTSL4-AS1Q5T5F5 129 aa10.6□□□□□ -0.71
HERPUD1-201ENST00000300302 MUSTN1Q8IVN3 82 aa10.6□□□□□ -0.71
HERPUD1-201ENST00000300302 UPK3BQ9BT76 320 aa10.6□□□□□ -0.71
HERPUD1-201ENST00000300302 K7ERJ3 54 aa10.59□□□□□ -0.71
HERPUD1-201ENST00000300302 A0A1B0GWB2 263 aa10.59□□□□□ -0.71
HERPUD1-201ENST00000300302 IFITM1P13164 125 aa10.59□□□□□ -0.71
HERPUD1-201ENST00000300302 CFAP161Q6P656 301 aa10.59□□□□□ -0.71
HERPUD1-201ENST00000300302 COPS9Q8WXC6 57 aa10.59□□□□□ -0.71
HERPUD1-201ENST00000300302 RAB37Q96AX2 223 aa10.59□□□□□ -0.71
HERPUD1-201ENST00000300302 NUPR2A6NF83 97 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms