RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 UPK3BQ9BT76 320 aa8.32□□□□□ -1.08
HMGB2-201ENST00000296503 MED14OSP0DP75 135 aa8.31□□□□□ -1.08
HMGB2-201ENST00000296503 DNAH6Q9C0G6 4158 aa8.3□□□□□ -1.08
HMGB2-201ENST00000296503 A0A087WWL8 130 aa8.3□□□□□ -1.08
HMGB2-201ENST00000296503 NXPH4O95158 308 aa8.3□□□□□ -1.08
HMGB2-201ENST00000296503 PAPPA-AS1Q5QFB9 102 aa8.3□□□□□ -1.08
HMGB2-201ENST00000296503 C1orf134Q5TEV5 83 aa8.3□□□□□ -1.08
HMGB2-201ENST00000296503 SPANXN1Q5VSR9 72 aa8.3□□□□□ -1.08
HMGB2-201ENST00000296503 Q6ZSN1 163 aa8.3□□□□□ -1.08
HMGB2-201ENST00000296503 TOMM6Q96B49 74 aa8.3□□□□□ -1.08
HMGB2-201ENST00000296503 RHODO00212 210 aa8.3□□□□□ -1.08
HMGB2-201ENST00000296503 GAGE5Q13069 117 aa8.3□□□□□ -1.08
HMGB2-201ENST00000296503 GAGE6Q13070 117 aa8.3□□□□□ -1.08
HMGB2-201ENST00000296503 Q6Q795 121 aa8.3□□□□□ -1.08
HMGB2-201ENST00000296503 NEXN-AS1Q8NBZ9 246 aa8.3□□□□□ -1.08
HMGB2-201ENST00000296503 MSRB1Q9NZV6 116 aa8.3□□□□□ -1.08
HMGB2-201ENST00000296503 LINC00336Q6ZUF6 198 aa8.29□□□□□ -1.08
HMGB2-201ENST00000296503 NFE4Q86UQ8 179 aa8.29□□□□□ -1.08
HMGB2-201ENST00000296503 PGPEP1Q9NXJ5 209 aa8.29□□□□□ -1.08
HMGB2-201ENST00000296503 RTL8CO15255 209 aa8.28□□□□□ -1.08
HMGB2-201ENST00000296503 CRYGDP07320 174 aa8.28□□□□□ -1.08
HMGB2-201ENST00000296503 TTC32Q5I0X7 151 aa8.28□□□□□ -1.08
HMGB2-201ENST00000296503 GAGE12JA6NER3 117 aa8.28□□□□□ -1.08
HMGB2-201ENST00000296503 PRSS29PA6NIE9 313 aa8.28□□□□□ -1.08
HMGB2-201ENST00000296503 PPP1R17O96001 155 aa8.28□□□□□ -1.08
HMGB2-201ENST00000296503 XGP55808 180 aa8.28□□□□□ -1.08
HMGB2-201ENST00000296503 GAGE4Q13068 117 aa8.28□□□□□ -1.08
HMGB2-201ENST00000296503 C14orf178Q8N769 122 aaPredicted RBP8.28□□□□□ -1.08
HMGB2-201ENST00000296503 SMIM2Q9BVW6 85 aa8.28□□□□□ -1.08
HMGB2-201ENST00000296503 DNAH10Q8IVF4 4471 aa8.27□□□□□ -1.09
HMGB2-201ENST00000296503 GAS8-AS1O95177 125 aa8.27□□□□□ -1.09
HMGB2-201ENST00000296503 MT-ATP8P03928 68 aa8.27□□□□□ -1.09
HMGB2-201ENST00000296503 RPL32P62910 135 aaKnown RBP8.27□□□□□ -1.09
HMGB2-201ENST00000296503 C6orf223Q8N319 242 aa8.27□□□□□ -1.09
HMGB2-201ENST00000296503 CARD19Q96LW7 228 aa8.27□□□□□ -1.09
HMGB2-201ENST00000296503 F5H697 171 aa8.26□□□□□ -1.09
HMGB2-201ENST00000296503 ZNF56Q15929 161 aa8.26□□□□□ -1.09
HMGB2-201ENST00000296503 Q9UF83 564 aa8.26□□□□□ -1.09
HMGB2-201ENST00000296503 WFDC10BQ8IUB3 73 aa8.25□□□□□ -1.09
HMGB2-201ENST00000296503 SCGB3A1Q96QR1 104 aa8.25□□□□□ -1.09
HMGB2-201ENST00000296503 KRTAP1-5Q9BYS1 174 aa8.25□□□□□ -1.09
HMGB2-201ENST00000296503 TIRAPP58753 221 aa8.24□□□□□ -1.09
HMGB2-201ENST00000296503 C10orf126Q8N4M7 172 aa8.23□□□□□ -1.09
HMGB2-201ENST00000296503 ANAPC13Q9BS18 74 aa8.23□□□□□ -1.09
HMGB2-201ENST00000296503 ZNF815PA8K554 130 aa8.23□□□□□ -1.09
HMGB2-201ENST00000296503 PSMB2P49721 201 aa8.23□□□□□ -1.09
HMGB2-201ENST00000296503 HERVK_113P61574 105 aa8.23□□□□□ -1.09
HMGB2-201ENST00000296503 SUMO2P61956 95 aaKnown RBP8.23□□□□□ -1.09
HMGB2-201ENST00000296503 RPL36AP83881 106 aaKnown RBP8.23□□□□□ -1.09
HMGB2-201ENST00000296503 LELP1Q5T871 98 aa8.23□□□□□ -1.09
HMGB2-201ENST00000296503 RPL36ALQ969Q0 106 aaKnown RBP8.23□□□□□ -1.09
HMGB2-201ENST00000296503 DNAH2Q9P225 4427 aa8.22□□□□□ -1.09
HMGB2-201ENST00000296503 IGHV3-38A0A0C4DH36 116 aa8.22□□□□□ -1.09
HMGB2-201ENST00000296503 TRBV10-1A0A0K0K1A3 114 aa8.22□□□□□ -1.09
HMGB2-201ENST00000296503 SRSF9Q13242 221 aaKnown RBP eCLIP8.22□□□□□ -1.092e-13■■■■□ 19.6
HMGB2-201ENST00000296503 BAALCQ8WXS3 180 aa8.22□□□□□ -1.09
HMGB2-201ENST00000296503 MGPP08493 103 aa8.21□□□□□ -1.09
HMGB2-201ENST00000296503 DNAH10OSP0CZ25 163 aa8.21□□□□□ -1.09
HMGB2-201ENST00000296503 SCGB1C2P0DMR2 95 aa8.21□□□□□ -1.09
HMGB2-201ENST00000296503 SPANXDQ9BXN6 97 aa8.21□□□□□ -1.09
HMGB2-201ENST00000296503 KIF25-AS1Q9Y6Z4 181 aa8.21□□□□□ -1.09
HMGB2-201ENST00000296503 FRAS1Q86XX4 4008 aa8.21□□□□□ -1.09
HMGB2-201ENST00000296503 TCL1BO95988 128 aa8.21□□□□□ -1.1
HMGB2-201ENST00000296503 RPL13AP40429 203 aaKnown RBP8.21□□□□□ -1.1
HMGB2-201ENST00000296503 LINC00315P59091 139 aa8.21□□□□□ -1.1
HMGB2-201ENST00000296503 PRO1854Q9UHT4 67 aa8.21□□□□□ -1.1
HMGB2-201ENST00000296503 EPPK1P58107 5090 aaKnown RBP8.21□□□□□ -1.1
HMGB2-201ENST00000296503 LOC107984156A0A0G2JMH3 177 aa8.2□□□□□ -1.1
HMGB2-201ENST00000296503 IGHV3-30P01768 117 aa8.2□□□□□ -1.1
HMGB2-201ENST00000296503 LINC00694P0DN24 101 aa8.2□□□□□ -1.1
HMGB2-201ENST00000296503 IGHV3-30-5P0DP03 117 aa8.2□□□□□ -1.1
HMGB2-201ENST00000296503 TNP2Q05952 138 aa8.2□□□□□ -1.1
HMGB2-201ENST00000296503 C2orf66Q6UXQ4 117 aa8.2□□□□□ -1.1
HMGB2-201ENST00000296503 SCGB1D4Q6XE38 83 aa8.2□□□□□ -1.1
HMGB2-201ENST00000296503 ARL17AQ8IVW1 177 aa8.2□□□□□ -1.1
HMGB2-201ENST00000296503 TMEM141Q96I45 108 aa8.2□□□□□ -1.1
HMGB2-201ENST00000296503 DPH3P1Q9H4G8 78 aa8.2□□□□□ -1.1
HMGB2-201ENST00000296503 TNFRSF18Q9Y5U5 241 aa8.2□□□□□ -1.1
HMGB2-201ENST00000296503 A0A0B4J2C4 111 aa8.19□□□□□ -1.1
HMGB2-201ENST00000296503 C11orf86A6NJI1 115 aa8.19□□□□□ -1.1
HMGB2-201ENST00000296503 IGHV3-33P01772 117 aa8.19□□□□□ -1.1
HMGB2-201ENST00000296503 CFC1BP0CG36 223 aa8.19□□□□□ -1.1
HMGB2-201ENST00000296503 CFC1P0CG37 223 aa8.19□□□□□ -1.1
HMGB2-201ENST00000296503 IGHV3-30-3P0DP02 117 aa8.19□□□□□ -1.1
HMGB2-201ENST00000296503 CFAP161Q6P656 301 aa8.19□□□□□ -1.1
HMGB2-201ENST00000296503 DNAH17Q9UFH2 4485 aa8.19□□□□□ -1.1
HMGB2-201ENST00000296503 A0A1B0GVY2 172 aa8.19□□□□□ -1.1
HMGB2-201ENST00000296503 GAGE2BQ13066 116 aa8.19□□□□□ -1.1
HMGB2-201ENST00000296503 GAGE2EQ4V326 116 aa8.19□□□□□ -1.1
HMGB2-201ENST00000296503 GAGE2DQ9UEU5 116 aa8.19□□□□□ -1.1
HMGB2-201ENST00000296503 LINC01556Q5JQF7 62 aa8.18□□□□□ -1.1
HMGB2-201ENST00000296503 ANKRD29Q8N6D5 301 aa8.18□□□□□ -1.1
HMGB2-201ENST00000296503 TIMM17AQ99595 171 aa8.18□□□□□ -1.1
HMGB2-201ENST00000296503 SLC25A20O43772 301 aa8.17□□□□□ -1.1
HMGB2-201ENST00000296503 NDUFV3P56181 108 aaKnown RBP8.17□□□□□ -1.1
HMGB2-201ENST00000296503 PLEKHB2Q96CS7 222 aa8.17□□□□□ -1.1
HMGB2-201ENST00000296503 PMVKQ15126 192 aa8.17□□□□□ -1.1
HMGB2-201ENST00000296503 SUMO4Q6EEV6 95 aa8.17□□□□□ -1.1
HMGB2-201ENST00000296503 IGLV4-69A0A075B6H9 119 aa8.16□□□□□ -1.1
HMGB2-201ENST00000296503 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms