RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 PF4P02776 101 aa9.69□□□□□ -0.86
NCSTN-201ENST00000294785 GAGE7O76087 117 aa9.68□□□□□ -0.86
NCSTN-201ENST00000294785 GAGE12FP0CL80 117 aa9.68□□□□□ -0.86
NCSTN-201ENST00000294785 GAGE12GP0CL81 117 aa9.68□□□□□ -0.86
NCSTN-201ENST00000294785 GAGE12IP0CL82 117 aa9.68□□□□□ -0.86
NCSTN-201ENST00000294785 GAGE2BQ13066 116 aa9.68□□□□□ -0.86
NCSTN-201ENST00000294785 GAGE2EQ4V326 116 aa9.68□□□□□ -0.86
NCSTN-201ENST00000294785 CSNK1G2-AS1Q8NCQ2 148 aa9.68□□□□□ -0.86
NCSTN-201ENST00000294785 C19orf73Q9NVV2 129 aa9.68□□□□□ -0.86
NCSTN-201ENST00000294785 GAGE2DQ9UEU5 116 aa9.68□□□□□ -0.86
NCSTN-201ENST00000294785 ZNF469Q96JG9 3925 aaPredicted RBP9.68□□□□□ -0.86
NCSTN-201ENST00000294785 A0A0U1RRA0 63 aa9.67□□□□□ -0.86
NCSTN-201ENST00000294785 FAM222AQ5U5X8 452 aa9.67□□□□□ -0.86
NCSTN-201ENST00000294785 APCP25054 2843 aa9.67□□□□□ -0.86
NCSTN-201ENST00000294785 TRGV4A0A0C4DH28 118 aa9.66□□□□□ -0.86
NCSTN-201ENST00000294785 TRACP01848 142 aa9.66□□□□□ -0.86
NCSTN-201ENST00000294785 ANAPC13Q9BS18 74 aa9.66□□□□□ -0.86
NCSTN-201ENST00000294785 ITPR3Q14573 2671 aa9.66□□□□□ -0.86
NCSTN-201ENST00000294785 COX7B2Q8TF08 81 aa9.66□□□□□ -0.86
NCSTN-201ENST00000294785 TRAV13-2A0A0B4J235 113 aa9.65□□□□□ -0.86
NCSTN-201ENST00000294785 RPL35AP18077 110 aaKnown RBP9.65□□□□□ -0.86
NCSTN-201ENST00000294785 C15orf53Q8NAA6 179 aa9.65□□□□□ -0.86
NCSTN-201ENST00000294785 TRBV6-8A0A0A6YYG3 113 aa9.65□□□□□ -0.87
NCSTN-201ENST00000294785 CRLF1O75462 422 aa9.64□□□□□ -0.87
NCSTN-201ENST00000294785 ACYP1P07311 99 aa9.64□□□□□ -0.87
NCSTN-201ENST00000294785 WFDC10AQ9H1F0 79 aa9.64□□□□□ -0.87
NCSTN-201ENST00000294785 WNK1Q9H4A3 2382 aa9.64□□□□□ -0.87
NCSTN-201ENST00000294785 TRAV26-1A0A087WT03 109 aa9.64□□□□□ -0.87
NCSTN-201ENST00000294785 LOC100131303A0A0U1RQF7 123 aa9.64□□□□□ -0.87
NCSTN-201ENST00000294785 FHL2Q14192 279 aa9.63□□□□□ -0.87
NCSTN-201ENST00000294785 HIST2H2BCQ6DN03 193 aa9.63□□□□□ -0.87
NCSTN-201ENST00000294785 KRTAP1-1Q07627 177 aa9.62□□□□□ -0.87
NCSTN-201ENST00000294785 RPL28P46779 137 aaKnown RBP9.62□□□□□ -0.87
NCSTN-201ENST00000294785 GAGE6Q13070 117 aa9.62□□□□□ -0.87
NCSTN-201ENST00000294785 IGHV3OR16-9A0A0B4J2B5 98 aa9.62□□□□□ -0.87
NCSTN-201ENST00000294785 CRPP02741 224 aa9.62□□□□□ -0.87
NCSTN-201ENST00000294785 NDUFV3P56181 108 aaKnown RBP9.62□□□□□ -0.87
NCSTN-201ENST00000294785 TTC32Q5I0X7 151 aa9.61□□□□□ -0.87
NCSTN-201ENST00000294785 TLN2Q9Y4G6 2542 aa9.61□□□□□ -0.87
NCSTN-201ENST00000294785 KIR2DL5BQ8NHK3 375 aa9.61□□□□□ -0.87
NCSTN-201ENST00000294785 A0A087WZ39 114 aa9.6□□□□□ -0.87
NCSTN-201ENST00000294785 MIR7-3HGQ8N6C7 128 aa9.6□□□□□ -0.87
NCSTN-201ENST00000294785 CHCHD5Q9BSY4 110 aa9.6□□□□□ -0.87
NCSTN-201ENST00000294785 IGLV4-60A0A075B6I1 120 aa9.6□□□□□ -0.87
NCSTN-201ENST00000294785 IBA57-AS1B1ANH7 110 aa9.6□□□□□ -0.87
NCSTN-201ENST00000294785 SETXQ7Z333 2677 aaKnown RBP9.59□□□□□ -0.87
NCSTN-201ENST00000294785 SND1-IT1Q9HBX3 110 aa9.59□□□□□ -0.87
NCSTN-201ENST00000294785 LINC00612Q8N6U2 182 aa9.59□□□□□ -0.87
NCSTN-201ENST00000294785 TOMM7Q9P0U1 55 aa9.59□□□□□ -0.87
NCSTN-201ENST00000294785 NHLRC4P0CG21 123 aaPredicted RBP9.58□□□□□ -0.88
NCSTN-201ENST00000294785 NF1P21359 2839 aa9.58□□□□□ -0.88
NCSTN-201ENST00000294785 SONP18583 2426 aaKnown RBP9.58□□□□□ -0.88
NCSTN-201ENST00000294785 HILS1P60008 231 aa9.58□□□□□ -0.88
NCSTN-201ENST00000294785 FLNAP21333 2647 aaKnown RBP9.57□□□□□ -0.88
NCSTN-201ENST00000294785 TRBV7-7A0A0K0K1E9 115 aa9.57□□□□□ -0.88
NCSTN-201ENST00000294785 BAALC-AS2P0C853 105 aa9.57□□□□□ -0.88
NCSTN-201ENST00000294785 LINC00337Q8N6G1 96 aa9.57□□□□□ -0.88
NCSTN-201ENST00000294785 IGKV2-28A0A075B6P5 120 aa9.57□□□□□ -0.88
NCSTN-201ENST00000294785 IGKV2D-28P01615 120 aa9.57□□□□□ -0.88
NCSTN-201ENST00000294785 LINC00158P58513 81 aa9.57□□□□□ -0.88
NCSTN-201ENST00000294785 IGKV3OR2-268A0A0C4DH90 116 aa9.56□□□□□ -0.88
NCSTN-201ENST00000294785 FAM218AQ96MZ4 157 aa9.56□□□□□ -0.88
NCSTN-201ENST00000294785 INAFM2P0DMQ5 153 aa9.56□□□□□ -0.88
NCSTN-201ENST00000294785 LINC00959A0A1B0GUT2 108 aa9.55□□□□□ -0.88
NCSTN-201ENST00000294785 A0A1B0GUV1 79 aa9.55□□□□□ -0.88
NCSTN-201ENST00000294785 NBPF19A0A087WUL8 3843 aa9.55□□□□□ -0.88
NCSTN-201ENST00000294785 H0YGX0 51 aa9.55□□□□□ -0.88
NCSTN-201ENST00000294785 PLA2G2AP14555 144 aa9.55□□□□□ -0.88
NCSTN-201ENST00000294785 IMUPQ9GZP8 106 aa9.55□□□□□ -0.88
NCSTN-201ENST00000294785 CCL18P55774 89 aa9.55□□□□□ -0.88
NCSTN-201ENST00000294785 CUBNO60494 3623 aa9.55□□□□□ -0.88
NCSTN-201ENST00000294785 NOTCH3Q9UM47 2321 aa9.54□□□□□ -0.88
NCSTN-201ENST00000294785 LINC01561Q8N1V8 128 aa9.54□□□□□ -0.88
NCSTN-201ENST00000294785 SMIM9A6NGZ8 99 aa9.54□□□□□ -0.88
NCSTN-201ENST00000294785 C22orf24Q9Y442 160 aa9.53□□□□□ -0.88
NCSTN-201ENST00000294785 DEFB130BP0DP73 79 aa9.53□□□□□ -0.88
NCSTN-201ENST00000294785 DEFB130AP0DP74 79 aa9.53□□□□□ -0.88
NCSTN-201ENST00000294785 MALP21145 153 aa9.53□□□□□ -0.88
NCSTN-201ENST00000294785 SS18Q15532 418 aa9.53□□□□□ -0.88
NCSTN-201ENST00000294785 SDIM1Q6ZPB5 146 aa9.53□□□□□ -0.88
NCSTN-201ENST00000294785 C5orf38Q86SI9 138 aa9.52□□□□□ -0.88
NCSTN-201ENST00000294785 SMIM11BQ8TCY0 68 aa9.52□□□□□ -0.88
NCSTN-201ENST00000294785 DNAL4O96015 105 aa9.52□□□□□ -0.89
NCSTN-201ENST00000294785 GYPEP15421 78 aa9.52□□□□□ -0.89
NCSTN-201ENST00000294785 Q8IZM0 81 aa9.52□□□□□ -0.89
NCSTN-201ENST00000294785 JMJD1CQ15652 2540 aa9.52□□□□□ -0.89
NCSTN-201ENST00000294785 C6orf226Q5I0X4 101 aa9.52□□□□□ -0.89
NCSTN-201ENST00000294785 LINC00643Q86TS7 51 aa9.52□□□□□ -0.89
NCSTN-201ENST00000294785 PRO0255Q9UI72 69 aa9.52□□□□□ -0.89
NCSTN-201ENST00000294785 ANK3Q12955 4377 aaKnown RBP9.51□□□□□ -0.89
NCSTN-201ENST00000294785 LINC00482Q8N8I6 264 aa9.5□□□□□ -0.89
NCSTN-201ENST00000294785 CCDC168Q8NDH2 2452 aa9.5□□□□□ -0.89
NCSTN-201ENST00000294785 NIPBLQ6KC79 2804 aaeCLIP9.5□□□□□ -0.89
NCSTN-201ENST00000294785 PFN2P35080 140 aa9.5□□□□□ -0.89
NCSTN-201ENST00000294785 X6R8D5 127 aa9.5□□□□□ -0.89
NCSTN-201ENST00000294785 PDZD2O15018 2839 aa9.5□□□□□ -0.89
NCSTN-201ENST00000294785 LY6G6DO95868 133 aa9.49□□□□□ -0.89
NCSTN-201ENST00000294785 C2CD3Q4AC94 2353 aa9.49□□□□□ -0.89
NCSTN-201ENST00000294785 Q9HAA7 133 aa9.49□□□□□ -0.89
NCSTN-201ENST00000294785 HELZ2Q9BYK8 2649 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms