RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 PRO1854Q9UHT4 67 aa9.85□□□□□ -0.83
NXF1-201ENST00000294172 FAM222AQ5U5X8 452 aa9.84□□□□□ -0.83
NXF1-201ENST00000294172 J3QR89 54 aa9.84□□□□□ -0.83
NXF1-201ENST00000294172 NPC2P61916 151 aa9.84□□□□□ -0.83
NXF1-201ENST00000294172 LINC00612Q8N6U2 182 aa9.84□□□□□ -0.83
NXF1-201ENST00000294172 GYPEP15421 78 aa9.83□□□□□ -0.84
NXF1-201ENST00000294172 APOC4P55056 127 aa9.83□□□□□ -0.84
NXF1-201ENST00000294172 LYRM7Q5U5X0 104 aa9.83□□□□□ -0.84
NXF1-201ENST00000294172 H7C2G1 150 aa9.83□□□□□ -0.84
NXF1-201ENST00000294172 SCGB1C2P0DMR2 95 aa9.83□□□□□ -0.84
NXF1-201ENST00000294172 H7C423 109 aa9.82□□□□□ -0.84
NXF1-201ENST00000294172 EIF4EBP3O60516 100 aaPredicted RBP9.82□□□□□ -0.84
NXF1-201ENST00000294172 FAM19A3Q7Z5A8 133 aa9.82□□□□□ -0.84
NXF1-201ENST00000294172 SMIM1B2RUZ4 78 aa9.82□□□□□ -0.84
NXF1-201ENST00000294172 DAND5Q8N907 189 aa9.82□□□□□ -0.84
NXF1-201ENST00000294172 ZNF625Q96I27 306 aaPredicted RBP9.82□□□□□ -0.84
NXF1-201ENST00000294172 Q9H8V8 135 aa9.82□□□□□ -0.84
NXF1-201ENST00000294172 IGLV4-60A0A075B6I1 120 aa9.81□□□□□ -0.84
NXF1-201ENST00000294172 A0A096LPF7 62 aa9.81□□□□□ -0.84
NXF1-201ENST00000294172 IGLV5-39A0A0G2JS06 123 aa9.81□□□□□ -0.84
NXF1-201ENST00000294172 NDUFA1O15239 70 aa9.81□□□□□ -0.84
NXF1-201ENST00000294172 TCL1BO95988 128 aa9.81□□□□□ -0.84
NXF1-201ENST00000294172 SMCPP49901 116 aaPredicted RBP9.81□□□□□ -0.84
NXF1-201ENST00000294172 ATP6V0E2Q8NHE4 81 aa9.81□□□□□ -0.84
NXF1-201ENST00000294172 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.81□□□□□ -0.84
NXF1-201ENST00000294172 MIAQ16674 131 aa9.81□□□□□ -0.84
NXF1-201ENST00000294172 IGHV4-28A0A0C4DH34 117 aa9.8□□□□□ -0.84
NXF1-201ENST00000294172 WFDC9Q8NEX5 89 aa9.8□□□□□ -0.84
NXF1-201ENST00000294172 SPANXDQ9BXN6 97 aa9.8□□□□□ -0.84
NXF1-201ENST00000294172 SPANXCQ9NY87 97 aa9.8□□□□□ -0.84
NXF1-201ENST00000294172 PRO0255Q9UI72 69 aa9.8□□□□□ -0.84
NXF1-201ENST00000294172 A0A0B4J2C4 111 aa9.79□□□□□ -0.84
NXF1-201ENST00000294172 A0A0U1RRA0 63 aa9.79□□□□□ -0.84
NXF1-201ENST00000294172 LYRM9A8MSI8 78 aa9.79□□□□□ -0.84
NXF1-201ENST00000294172 ERG28Q9UKR5 140 aa9.79□□□□□ -0.84
NXF1-201ENST00000294172 F5H768 121 aa9.79□□□□□ -0.84
NXF1-201ENST00000294172 TRBV20-1A0A075B6N2 111 aa9.78□□□□□ -0.84
NXF1-201ENST00000294172 GAGE12HA6NDE8 117 aa9.78□□□□□ -0.84
NXF1-201ENST00000294172 TMEM262E9PQX1 116 aa9.78□□□□□ -0.84
NXF1-201ENST00000294172 PAX4O43316 350 aa9.78□□□□□ -0.84
NXF1-201ENST00000294172 IGHV3-33P01772 117 aa9.78□□□□□ -0.84
NXF1-201ENST00000294172 Q1RN00 199 aa9.78□□□□□ -0.84
NXF1-201ENST00000294172 IGHV4-30-4P0DP06 118 aa9.78□□□□□ -0.84
NXF1-201ENST00000294172 CIRBPQ14011 172 aaKnown RBP9.78□□□□□ -0.84
NXF1-201ENST00000294172 PRIMA1Q86XR5 153 aa9.77□□□□□ -0.85
NXF1-201ENST00000294172 TIMM17BO60830 172 aa9.77□□□□□ -0.85
NXF1-201ENST00000294172 DAD1P61803 113 aa9.77□□□□□ -0.85
NXF1-201ENST00000294172 FOXI1Q12951 378 aa9.77□□□□□ -0.85
NXF1-201ENST00000294172 SIGMAR1Q99720 223 aa9.77□□□□□ -0.85
NXF1-201ENST00000294172 STAB1Q9NY15 2570 aa9.76□□□□□ -0.85
NXF1-201ENST00000294172 CELA1Q9UNI1 258 aa9.76□□□□□ -0.85
NXF1-201ENST00000294172 MEIG1Q5JSS6 88 aa9.75□□□□□ -0.85
NXF1-201ENST00000294172 OXLD1Q5BKU9 147 aa9.74□□□□□ -0.85
NXF1-201ENST00000294172 Q8NAQ8 132 aa9.74□□□□□ -0.85
NXF1-201ENST00000294172 TOMM7Q9P0U1 55 aa9.74□□□□□ -0.85
NXF1-201ENST00000294172 MIFP14174 115 aa9.74□□□□□ -0.85
NXF1-201ENST00000294172 IFITM1P13164 125 aa9.73□□□□□ -0.85
NXF1-201ENST00000294172 SPATA25Q9BR10 227 aa9.73□□□□□ -0.85
NXF1-201ENST00000294172 HTN3P15516 51 aa9.73□□□□□ -0.85
NXF1-201ENST00000294172 RNF183Q96D59 192 aa9.73□□□□□ -0.85
NXF1-201ENST00000294172 PKD1L1Q8TDX9 2849 aa9.73□□□□□ -0.85
NXF1-201ENST00000294172 TRAV26-1A0A087WT03 109 aa9.72□□□□□ -0.85
NXF1-201ENST00000294172 WIPF1O43516 503 aa9.72□□□□□ -0.85
NXF1-201ENST00000294172 CLPSL2Q6UWE3 100 aa9.72□□□□□ -0.85
NXF1-201ENST00000294172 C5orf38Q86SI9 138 aa9.72□□□□□ -0.85
NXF1-201ENST00000294172 LINC00308Q8TCZ7 52 aa9.72□□□□□ -0.85
NXF1-201ENST00000294172 COX7B2Q8TF08 81 aa9.72□□□□□ -0.85
NXF1-201ENST00000294172 MAST4O15021 2626 aa9.72□□□□□ -0.85
NXF1-201ENST00000294172 FBN1P35555 2871 aaKnown RBP9.72□□□□□ -0.85
NXF1-201ENST00000294172 IGHV3OR16-9A0A0B4J2B5 98 aa9.72□□□□□ -0.85
NXF1-201ENST00000294172 LINC00959A0A1B0GUT2 108 aa9.72□□□□□ -0.85
NXF1-201ENST00000294172 ATP5G1P05496 136 aa9.72□□□□□ -0.85
NXF1-201ENST00000294172 TEN1Q86WV5 123 aa9.72□□□□□ -0.85
NXF1-201ENST00000294172 C9JAW5 83 aa9.71□□□□□ -0.85
NXF1-201ENST00000294172 SPART-AS1P0CW21 52 aa9.71□□□□□ -0.85
NXF1-201ENST00000294172 KRTAP24-1Q3LI83 254 aa9.71□□□□□ -0.85
NXF1-201ENST00000294172 CARD19Q96LW7 228 aa9.71□□□□□ -0.85
NXF1-201ENST00000294172 XCL1P47992 114 aa9.71□□□□□ -0.86
NXF1-201ENST00000294172 HERV-K104P63124 156 aa9.71□□□□□ -0.86
NXF1-201ENST00000294172 TRIAP1O43715 76 aa9.7□□□□□ -0.86
NXF1-201ENST00000294172 PPDPFLQ8WWR9 84 aa9.7□□□□□ -0.86
NXF1-201ENST00000294172 SLC25A20O43772 301 aa9.7□□□□□ -0.86
NXF1-201ENST00000294172 ANKRD29Q8N6D5 301 aa9.7□□□□□ -0.86
NXF1-201ENST00000294172 A0A1B0GUV1 79 aa9.69□□□□□ -0.86
NXF1-201ENST00000294172 A0A087WZ39 114 aa9.68□□□□□ -0.86
NXF1-201ENST00000294172 RPL13AP40429 203 aaKnown RBP9.68□□□□□ -0.86
NXF1-201ENST00000294172 KRTAP10-11P60412 298 aa9.68□□□□□ -0.86
NXF1-201ENST00000294172 SS18Q15532 418 aa9.68□□□□□ -0.86
NXF1-201ENST00000294172 ATXN8Q156A1 80 aa9.68□□□□□ -0.86
NXF1-201ENST00000294172 SOSTDC1Q6X4U4 206 aa9.68□□□□□ -0.86
NXF1-201ENST00000294172 C3orf56Q8N813 242 aa9.68□□□□□ -0.86
NXF1-201ENST00000294172 ICOSQ9Y6W8 199 aa9.68□□□□□ -0.86
NXF1-201ENST00000294172 TRBV30A0A0K0K1B3 111 aa9.68□□□□□ -0.86
NXF1-201ENST00000294172 Q8N3U1 123 aa9.67□□□□□ -0.86
NXF1-201ENST00000294172 LINC00269Q8N2A0 174 aa9.67□□□□□ -0.86
NXF1-201ENST00000294172 COPS9Q8WXC6 57 aa9.67□□□□□ -0.86
NXF1-201ENST00000294172 C11orf68Q9H3H3 251 aaKnown RBP9.67□□□□□ -0.86
NXF1-201ENST00000294172 RETNQ9HD89 108 aa9.66□□□□□ -0.86
NXF1-201ENST00000294172 ANK2Q01484 3957 aa9.66□□□□□ -0.86
NXF1-201ENST00000294172 LINC01620Q4KN68 170 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms