RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 FN1P02751 2386 aaKnown RBP10.51□□□□□ -0.73
CCNF-201ENST00000293968 BEAN1Q3B7T3 259 aa10.51□□□□□ -0.73
CCNF-201ENST00000293968 HIST2H2BCQ6DN03 193 aa10.51□□□□□ -0.73
CCNF-201ENST00000293968 C14orf132Q9NPU4 83 aa10.51□□□□□ -0.73
CCNF-201ENST00000293968 CDC42SE2Q9NRR3 84 aa10.51□□□□□ -0.73
CCNF-201ENST00000293968 C1orf158Q8N1D5 194 aa10.5□□□□□ -0.73
CCNF-201ENST00000293968 TRAV13-2A0A0B4J235 113 aa10.5□□□□□ -0.73
CCNF-201ENST00000293968 INAFM2P0DMQ5 153 aa10.5□□□□□ -0.73
CCNF-201ENST00000293968 ODF3L2Q3SX64 289 aa10.5□□□□□ -0.73
CCNF-201ENST00000293968 COX7B2Q8TF08 81 aa10.5□□□□□ -0.73
CCNF-201ENST00000293968 IGKV3D-7A0A0C4DH55 119 aa10.5□□□□□ -0.73
CCNF-201ENST00000293968 TRBV7-7A0A0K0K1E9 115 aa10.5□□□□□ -0.73
CCNF-201ENST00000293968 TRACP01848 142 aa10.5□□□□□ -0.73
CCNF-201ENST00000293968 DEFB121Q5J5C9 76 aa10.5□□□□□ -0.73
CCNF-201ENST00000293968 RNF152Q8N8N0 203 aa10.5□□□□□ -0.73
CCNF-201ENST00000293968 PRORYQ9H606 182 aa10.5□□□□□ -0.73
CCNF-201ENST00000293968 CHD6Q8TD26 2715 aa10.5□□□□□ -0.73
CCNF-201ENST00000293968 MALP21145 153 aa10.49□□□□□ -0.73
CCNF-201ENST00000293968 SHISA2Q6UWI4 295 aa10.49□□□□□ -0.73
CCNF-201ENST00000293968 LINC01600Q96MT4 127 aa10.49□□□□□ -0.73
CCNF-201ENST00000293968 CSMD2Q7Z408 3487 aa10.49□□□□□ -0.73
CCNF-201ENST00000293968 RNASE1P07998 156 aaKnown RBP10.49□□□□□ -0.73
CCNF-201ENST00000293968 Q96MF0 132 aa10.49□□□□□ -0.73
CCNF-201ENST00000293968 J3QLI3 93 aa10.49□□□□□ -0.73
CCNF-201ENST00000293968 CFAP46Q8IYW2 2715 aa10.49□□□□□ -0.73
CCNF-201ENST00000293968 SDIM1Q6ZPB5 146 aa10.48□□□□□ -0.73
CCNF-201ENST00000293968 SLPIP03973 132 aa10.48□□□□□ -0.73
CCNF-201ENST00000293968 PLA2G2AP14555 144 aa10.47□□□□□ -0.73
CCNF-201ENST00000293968 C4orf3Q8WVX3 66 aa10.47□□□□□ -0.73
CCNF-201ENST00000293968 WFDC10AQ9H1F0 79 aa10.47□□□□□ -0.73
CCNF-201ENST00000293968 LINC00337Q8N6G1 96 aa10.47□□□□□ -0.73
CCNF-201ENST00000293968 LECT2O14960 151 aa10.47□□□□□ -0.73
CCNF-201ENST00000293968 A0A087WYN8 130 aa10.47□□□□□ -0.73
CCNF-201ENST00000293968 CLPSL2Q6UWE3 100 aa10.46□□□□□ -0.73
CCNF-201ENST00000293968 SMIM11BQ8TCY0 68 aa10.46□□□□□ -0.74
CCNF-201ENST00000293968 F5H768 121 aa10.45□□□□□ -0.74
CCNF-201ENST00000293968 KLK5Q9Y337 293 aaPredicted RBP10.45□□□□□ -0.74
CCNF-201ENST00000293968 TRBV10-1A0A0K0K1A3 114 aa10.45□□□□□ -0.74
CCNF-201ENST00000293968 C6orf226Q5I0X4 101 aa10.45□□□□□ -0.74
CCNF-201ENST00000293968 MXRA5Q9NR99 2828 aa10.45□□□□□ -0.74
CCNF-201ENST00000293968 DEFB130BP0DP73 79 aa10.44□□□□□ -0.74
CCNF-201ENST00000293968 DEFB130AP0DP74 79 aa10.44□□□□□ -0.74
CCNF-201ENST00000293968 IGHV4-31P0DP07 118 aa10.44□□□□□ -0.74
CCNF-201ENST00000293968 NCR3O14931 201 aa10.44□□□□□ -0.74
CCNF-201ENST00000293968 C3orf22Q8N5N4 141 aa10.44□□□□□ -0.74
CCNF-201ENST00000293968 ZNF462Q96JM2 2506 aa10.43□□□□□ -0.74
CCNF-201ENST00000293968 XCL1P47992 114 aa10.43□□□□□ -0.74
CCNF-201ENST00000293968 IMUPQ9GZP8 106 aa10.43□□□□□ -0.74
CCNF-201ENST00000293968 TEX15Q9BXT5 2789 aa10.43□□□□□ -0.74
CCNF-201ENST00000293968 IGLV4-60A0A075B6I1 120 aa10.43□□□□□ -0.74
CCNF-201ENST00000293968 A0A096LPF7 62 aa10.43□□□□□ -0.74
CCNF-201ENST00000293968 TMEM126AQ9H061 195 aa10.43□□□□□ -0.74
CCNF-201ENST00000293968 PIEZO1Q92508 2521 aa10.42□□□□□ -0.74
CCNF-201ENST00000293968 CCL18P55774 89 aa10.42□□□□□ -0.74
CCNF-201ENST00000293968 FAM110AQ9BQ89 295 aa10.42□□□□□ -0.74
CCNF-201ENST00000293968 A8MTW9 85 aa10.42□□□□□ -0.74
CCNF-201ENST00000293968 CCL24O00175 119 aa10.42□□□□□ -0.74
CCNF-201ENST00000293968 HIST1H4AP62805 103 aaKnown RBP10.42□□□□□ -0.74
CCNF-201ENST00000293968 FBN2P35556 2912 aa10.42□□□□□ -0.74
CCNF-201ENST00000293968 PRB1P04280 392 aa10.41□□□□□ -0.74
CCNF-201ENST00000293968 C9orf129Q5T035 196 aaKnown RBP10.41□□□□□ -0.74
CCNF-201ENST00000293968 MTORP42345 2549 aa10.41□□□□□ -0.74
CCNF-201ENST00000293968 RPL28P46779 137 aaKnown RBP10.41□□□□□ -0.74
CCNF-201ENST00000293968 CSDC2Q9Y534 153 aaKnown RBP10.41□□□□□ -0.74
CCNF-201ENST00000293968 IGKV2-28A0A075B6P5 120 aa10.4□□□□□ -0.74
CCNF-201ENST00000293968 IGKV2D-28P01615 120 aa10.4□□□□□ -0.74
CCNF-201ENST00000293968 UQCRQO14949 82 aa10.4□□□□□ -0.74
CCNF-201ENST00000293968 A0A087WVE0 104 aa10.4□□□□□ -0.75
CCNF-201ENST00000293968 KRTAP10-9P60411 292 aa10.39□□□□□ -0.75
CCNF-201ENST00000293968 PF4P02776 101 aa10.39□□□□□ -0.75
CCNF-201ENST00000293968 OVOL2Q9BRP0 275 aa10.39□□□□□ -0.75
CCNF-201ENST00000293968 A0A1B0GX51 115 aa10.39□□□□□ -0.75
CCNF-201ENST00000293968 PPDPFQ9H3Y8 114 aa10.39□□□□□ -0.75
CCNF-201ENST00000293968 hADV29S1A0JD25 119 aa10.38□□□□□ -0.75
CCNF-201ENST00000293968 FAM222AQ5U5X8 452 aa10.37□□□□□ -0.75
CCNF-201ENST00000293968 LOC107984640A0A0U1RRK4 108 aa10.37□□□□□ -0.75
CCNF-201ENST00000293968 H0YGX0 51 aa10.37□□□□□ -0.75
CCNF-201ENST00000293968 PRR3P79522 188 aaKnown RBP10.36□□□□□ -0.75
CCNF-201ENST00000293968 C22orf24Q9Y442 160 aa10.36□□□□□ -0.75
CCNF-201ENST00000293968 LRRC75A-AS1Q8N1F1 130 aa10.36□□□□□ -0.75
CCNF-201ENST00000293968 TMEM86BQ8N661 226 aa10.36□□□□□ -0.75
CCNF-201ENST00000293968 LINC00846Q9NV44 126 aa10.36□□□□□ -0.75
CCNF-201ENST00000293968 C16orf74Q96GX8 76 aa10.36□□□□□ -0.75
CCNF-201ENST00000293968 A0A096LNT2 108 aa10.35□□□□□ -0.75
CCNF-201ENST00000293968 TRBV6-8A0A0A6YYG3 113 aa10.35□□□□□ -0.75
CCNF-201ENST00000293968 IGSF10Q6WRI0 2623 aa10.35□□□□□ -0.75
CCNF-201ENST00000293968 ACANP16112 2415 aa10.34□□□□□ -0.75
CCNF-201ENST00000293968 ATOX1O00244 68 aa10.34□□□□□ -0.75
CCNF-201ENST00000293968 COX7CP15954 63 aa10.34□□□□□ -0.75
CCNF-201ENST00000293968 ORMDL1Q9P0S3 153 aa10.34□□□□□ -0.75
CCNF-201ENST00000293968 NF1P21359 2839 aa10.34□□□□□ -0.75
CCNF-201ENST00000293968 LINC00526Q96FQ7 95 aa10.34□□□□□ -0.75
CCNF-201ENST00000293968 IGLV10-54A0A075B6I4 117 aa10.33□□□□□ -0.76
CCNF-201ENST00000293968 IBA57-AS1B1ANH7 110 aa10.33□□□□□ -0.76
CCNF-201ENST00000293968 CXCL5P42830 114 aa10.33□□□□□ -0.76
CCNF-201ENST00000293968 FAM19A3Q7Z5A8 133 aa10.33□□□□□ -0.76
CCNF-201ENST00000293968 WFDC9Q8NEX5 89 aa10.33□□□□□ -0.76
CCNF-201ENST00000293968 TRAV25A0A0B4J276 109 aa10.33□□□□□ -0.76
CCNF-201ENST00000293968 CFAP161Q6P656 301 aa10.32□□□□□ -0.76
CCNF-201ENST00000293968 TRBV6-4A0A1B0GX49 114 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms