RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 TRAV1-2A0A0B4J238 106 aa2.92□□□□□ -1.94
CD44-202ENST00000278385 MUC21A0A0G2JKD1 596 aa2.92□□□□□ -1.94
CD44-202ENST00000278385 A6NN06 94 aa2.92□□□□□ -1.94
CD44-202ENST00000278385 ZNF736B4DX44 427 aaPredicted RBP2.92□□□□□ -1.94
CD44-202ENST00000278385 CIRBPQ14011 172 aaKnown RBP2.92□□□□□ -1.94
CD44-202ENST00000278385 ASB16-AS1Q495Z4 193 aa2.92□□□□□ -1.94
CD44-202ENST00000278385 FAM229BQ4G0N7 80 aa2.92□□□□□ -1.94
CD44-202ENST00000278385 FAM74A1Q5RGS3 127 aa2.92□□□□□ -1.94
CD44-202ENST00000278385 Q5W150 140 aa2.92□□□□□ -1.94
CD44-202ENST00000278385 C10orf99Q6UWK7 81 aa2.92□□□□□ -1.94
CD44-202ENST00000278385 DPPA3Q6W0C5 159 aa2.92□□□□□ -1.94
CD44-202ENST00000278385 FP248Q71RG6 208 aaPredicted RBP2.92□□□□□ -1.94
CD44-202ENST00000278385 C1orf64Q8NEQ6 169 aa2.92□□□□□ -1.94
CD44-202ENST00000278385 LINC00467Q9BRT7 94 aa2.92□□□□□ -1.94
CD44-202ENST00000278385 A0A096LNJ9 63 aa2.91□□□□□ -1.94
CD44-202ENST00000278385 G3V3Q6 166 aa2.91□□□□□ -1.94
CD44-202ENST00000278385 H3BQ85 93 aa2.91□□□□□ -1.94
CD44-202ENST00000278385 NDUFA3O95167 84 aa2.91□□□□□ -1.94
CD44-202ENST00000278385 MT-ATP8P03928 68 aa2.91□□□□□ -1.94
CD44-202ENST00000278385 SAA2P0DJI9 122 aaPredicted RBP2.91□□□□□ -1.94
CD44-202ENST00000278385 ETV6P41212 452 aa2.91□□□□□ -1.94
CD44-202ENST00000278385 NPC2P61916 151 aa2.91□□□□□ -1.94
CD44-202ENST00000278385 Q0VG73 95 aa2.91□□□□□ -1.94
CD44-202ENST00000278385 PLGLAQ15195 96 aa2.91□□□□□ -1.94
CD44-202ENST00000278385 ARHGAP5-AS1Q96IT6 56 aa2.91□□□□□ -1.94
CD44-202ENST00000278385 RETNLBQ9BQ08 111 aa2.91□□□□□ -1.94
CD44-202ENST00000278385 ATG5Q9H1Y0 275 aa2.91□□□□□ -1.94
CD44-202ENST00000278385 BET1LQ9NYM9 111 aa2.91□□□□□ -1.94
CD44-202ENST00000278385 TRBV6-7A0A0A0MS04 114 aa2.9□□□□□ -1.95
CD44-202ENST00000278385 FAM24AA6NFZ4 105 aa2.9□□□□□ -1.95
CD44-202ENST00000278385 LYRM1O43325 122 aa2.9□□□□□ -1.95
CD44-202ENST00000278385 PRB2P02812 416 aaPredicted RBP2.9□□□□□ -1.95
CD44-202ENST00000278385 DNAH10OSP0CZ25 163 aa2.9□□□□□ -1.95
CD44-202ENST00000278385 CKS2P33552 79 aa2.9□□□□□ -1.95
CD44-202ENST00000278385 DEFB116Q30KQ4 102 aa2.9□□□□□ -1.95
CD44-202ENST00000278385 RPL39P5Q59GN2 51 aa2.9□□□□□ -1.95
CD44-202ENST00000278385 DEFB121Q5J5C9 76 aa2.9□□□□□ -1.95
CD44-202ENST00000278385 ATP11AUNQ6ZP68 121 aa2.9□□□□□ -1.95
CD44-202ENST00000278385 C4orf3Q8WVX3 66 aa2.9□□□□□ -1.95
CD44-202ENST00000278385 HYLS1Q96M11 299 aa2.9□□□□□ -1.95
CD44-202ENST00000278385 NDUFB11Q9NX14 153 aa2.9□□□□□ -1.95
CD44-202ENST00000278385 NHP2Q9NX24 153 aaKnown RBP2.9□□□□□ -1.95
CD44-202ENST00000278385 TRAV7A0A075B6U4 112 aa2.89□□□□□ -1.95
CD44-202ENST00000278385 TMEM235A6NFC5 223 aa2.89□□□□□ -1.95
CD44-202ENST00000278385 COLCA2A8K830 154 aa2.89□□□□□ -1.95
CD44-202ENST00000278385 G3V318 75 aa2.89□□□□□ -1.95
CD44-202ENST00000278385 H3BUA1 57 aa2.89□□□□□ -1.95
CD44-202ENST00000278385 PANO1I0J062 215 aa2.89□□□□□ -1.95
CD44-202ENST00000278385 K7EIL1 84 aa2.89□□□□□ -1.95
CD44-202ENST00000278385 GNRH2O43555 120 aa2.89□□□□□ -1.95
CD44-202ENST00000278385 TRAPPC2P0DI81 140 aa2.89□□□□□ -1.95
CD44-202ENST00000278385 TRAPPC2BP0DI82 140 aa2.89□□□□□ -1.95
CD44-202ENST00000278385 FXYD2P54710 66 aa2.89□□□□□ -1.95
CD44-202ENST00000278385 ATP6V0E2Q8NHE4 81 aa2.89□□□□□ -1.95
CD44-202ENST00000278385 MYOZ3Q8TDC0 251 aa2.89□□□□□ -1.95
CD44-202ENST00000278385 CYYR1Q96J86 154 aa2.89□□□□□ -1.95
CD44-202ENST00000278385 DSCR8Q96T75 97 aa2.89□□□□□ -1.95
CD44-202ENST00000278385 NPVFQ9HCQ7 196 aa2.89□□□□□ -1.95
CD44-202ENST00000278385 CMYA5Q8N3K9 4069 aa2.88□□□□□ -1.95
CD44-202ENST00000278385 TRBV10-2A0A0K0K1G8 114 aa2.88□□□□□ -1.95
CD44-202ENST00000278385 H3BPC8 53 aa2.88□□□□□ -1.95
CD44-202ENST00000278385 NDUFB6O95139 128 aa2.88□□□□□ -1.95
CD44-202ENST00000278385 IGLV1-51P01701 117 aa2.88□□□□□ -1.95
CD44-202ENST00000278385 IGHV3-53P01767 116 aa2.88□□□□□ -1.95
CD44-202ENST00000278385 IGLV7-43P04211 117 aa2.88□□□□□ -1.95
CD44-202ENST00000278385 ZNF22P17026 224 aaPredicted RBP2.88□□□□□ -1.95
CD44-202ENST00000278385 DSCR10P59022 87 aa2.88□□□□□ -1.95
CD44-202ENST00000278385 FXYD3Q14802 87 aa2.88□□□□□ -1.95
CD44-202ENST00000278385 IQCJQ1A5X6 159 aa2.88□□□□□ -1.95
CD44-202ENST00000278385 UNQ5815/PRO19632Q6UWF5 114 aa2.88□□□□□ -1.95
CD44-202ENST00000278385 OR2T35Q8NGX2 323 aa2.88□□□□□ -1.95
CD44-202ENST00000278385 VSTM2AQ8TAG5 236 aa2.88□□□□□ -1.95
CD44-202ENST00000278385 LINC00052Q96N35 136 aa2.88□□□□□ -1.95
CD44-202ENST00000278385 MGAM2Q2M2H8 2515 aa2.87□□□□□ -1.95
CD44-202ENST00000278385 A0A087WXM4 84 aa2.87□□□□□ -1.95
CD44-202ENST00000278385 RBAKDNA6NC62 111 aa2.87□□□□□ -1.95
CD44-202ENST00000278385 H3BQ15 152 aa2.87□□□□□ -1.95
CD44-202ENST00000278385 SSSCA1O60232 199 aa2.87□□□□□ -1.95
CD44-202ENST00000278385 COX7CP15954 63 aa2.87□□□□□ -1.95
CD44-202ENST00000278385 NDPQ00604 133 aa2.87□□□□□ -1.95
CD44-202ENST00000278385 ESRGQ1W209 222 aa2.87□□□□□ -1.95
CD44-202ENST00000278385 DEFB136Q30KP8 78 aa2.87□□□□□ -1.95
CD44-202ENST00000278385 LYZL1Q6UWQ5 148 aa2.87□□□□□ -1.95
CD44-202ENST00000278385 Q8N814 137 aa2.87□□□□□ -1.95
CD44-202ENST00000278385 CYB561D1Q8N8Q1 229 aa2.87□□□□□ -1.95
CD44-202ENST00000278385 S100A16Q96FQ6 103 aaKnown RBP2.87□□□□□ -1.95
CD44-202ENST00000278385 USMG5Q96IX5 58 aa2.87□□□□□ -1.95
CD44-202ENST00000278385 FAM103A1Q9BTL3 118 aaKnown RBP2.87□□□□□ -1.95
CD44-202ENST00000278385 RPS10P5Q9NQ39 176 aa2.87□□□□□ -1.95
CD44-202ENST00000278385 TMEM242Q9NWH2 141 aa2.87□□□□□ -1.95
CD44-202ENST00000278385 HHLA3Q9XRX5 114 aa2.87□□□□□ -1.95
CD44-202ENST00000278385 TIMM9Q9Y5J7 89 aa2.87□□□□□ -1.95
CD44-202ENST00000278385 NOTCH3Q9UM47 2321 aa2.87□□□□□ -1.95
CD44-202ENST00000278385 NBEAL1Q6ZS30 2694 aa2.86□□□□□ -1.95
CD44-202ENST00000278385 hDV103S1A0JD37 113 aa2.86□□□□□ -1.95
CD44-202ENST00000278385 C17orf112F2Z3M2 114 aa2.86□□□□□ -1.95
CD44-202ENST00000278385 H7C2G1 150 aa2.86□□□□□ -1.95
CD44-202ENST00000278385 SNCGO76070 127 aa2.86□□□□□ -1.95
CD44-202ENST00000278385 DEFA4P12838 97 aa2.86□□□□□ -1.95
CD44-202ENST00000278385 ROMO1P60602 79 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms