RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 DEFB113Q30KQ7 82 aa2.11□□□□□ -2.07
HERC4-201ENST00000277817 CEMP1Q6PRD7 247 aaPredicted RBP2.11□□□□□ -2.07
HERC4-201ENST00000277817 DAND5Q8N907 189 aa2.11□□□□□ -2.07
HERC4-201ENST00000277817 TOMM6Q96B49 74 aa2.11□□□□□ -2.07
HERC4-201ENST00000277817 LAMA5O15230 3695 aa2.11□□□□□ -2.07
HERC4-201ENST00000277817 UTP20O75691 2785 aaKnown RBP2.11□□□□□ -2.07
HERC4-201ENST00000277817 FBN2P35556 2912 aa2.11□□□□□ -2.07
HERC4-201ENST00000277817 A6NDX4 124 aa2.11□□□□□ -2.07
HERC4-201ENST00000277817 H3BMM0 161 aa2.11□□□□□ -2.07
HERC4-201ENST00000277817 IGLC6P0CF74 106 aa2.11□□□□□ -2.07
HERC4-201ENST00000277817 XCL1P47992 114 aa2.11□□□□□ -2.07
HERC4-201ENST00000277817 DAD1P61803 113 aa2.11□□□□□ -2.07
HERC4-201ENST00000277817 HERVK_113P63121 156 aa2.11□□□□□ -2.07
HERC4-201ENST00000277817 Q6ZRP5 223 aa2.11□□□□□ -2.07
HERC4-201ENST00000277817 C5orf38Q86SI9 138 aa2.11□□□□□ -2.07
HERC4-201ENST00000277817 C11orf72Q8NBR9 251 aa2.11□□□□□ -2.07
HERC4-201ENST00000277817 UBE2WQ96B02 151 aa2.11□□□□□ -2.07
HERC4-201ENST00000277817 C20orf173Q96LM9 149 aa2.11□□□□□ -2.07
HERC4-201ENST00000277817 ESM1Q9NQ30 184 aa2.11□□□□□ -2.07
HERC4-201ENST00000277817 FRYLO94915 3013 aa2.11□□□□□ -2.07
HERC4-201ENST00000277817 TRAV12-1A0A0B4J245 112 aa2.1□□□□□ -2.07
HERC4-201ENST00000277817 A0A0J9YX75 114 aa2.1□□□□□ -2.07
HERC4-201ENST00000277817 ANGP03950 147 aaKnown RBP2.1□□□□□ -2.07
HERC4-201ENST00000277817 P0DMU3 169 aa2.1□□□□□ -2.07
HERC4-201ENST00000277817 FAM231AP0DMU4 169 aa2.1□□□□□ -2.07
HERC4-201ENST00000277817 FAM231CP0DMU5 169 aa2.1□□□□□ -2.07
HERC4-201ENST00000277817 C10orf99Q6UWK7 81 aa2.1□□□□□ -2.07
HERC4-201ENST00000277817 TMEM61Q8N0U2 210 aa2.1□□□□□ -2.07
HERC4-201ENST00000277817 LINC00337Q8N6G1 96 aa2.1□□□□□ -2.07
HERC4-201ENST00000277817 CARD19Q96LW7 228 aa2.1□□□□□ -2.07
HERC4-201ENST00000277817 E9PLD3 99 aa2.1□□□□□ -2.07
HERC4-201ENST00000277817 GAS8-AS1O95177 125 aa2.1□□□□□ -2.07
HERC4-201ENST00000277817 IGKV2D-26A0A0A0MRZ7 120 aa2.1□□□□□ -2.07
HERC4-201ENST00000277817 EBI3Q14213 229 aa2.1□□□□□ -2.07
HERC4-201ENST00000277817 Q6ZQT7 251 aa2.1□□□□□ -2.07
HERC4-201ENST00000277817 C3orf56Q8N813 242 aa2.1□□□□□ -2.07
HERC4-201ENST00000277817 HIGD1BQ9P298 99 aa2.1□□□□□ -2.07
HERC4-201ENST00000277817 RYR2Q92736 4967 aa2.1□□□□□ -2.07
HERC4-201ENST00000277817 PRRC2AP48634 2157 aaKnown RBP2.1□□□□□ -2.07
HERC4-201ENST00000277817 FLNAP21333 2647 aaKnown RBP2.1□□□□□ -2.07
HERC4-201ENST00000277817 TINCRA0A1B0GVN0 87 aa2.1□□□□□ -2.07
HERC4-201ENST00000277817 KRTAP4-7Q9BYR0 210 aa2.1□□□□□ -2.07
HERC4-201ENST00000277817 EDA2RQ9HAV5 297 aa2.1□□□□□ -2.07
HERC4-201ENST00000277817 SPANXA1Q9NS26 97 aa2.1□□□□□ -2.07
HERC4-201ENST00000277817 SACSQ9NZJ4 4579 aa2.09□□□□□ -2.07
HERC4-201ENST00000277817 IGLV10-54A0A075B6I4 117 aa2.09□□□□□ -2.07
HERC4-201ENST00000277817 TRBV7-3A0A075B6L6 115 aa2.09□□□□□ -2.07
HERC4-201ENST00000277817 SMIM9A6NGZ8 99 aa2.09□□□□□ -2.07
HERC4-201ENST00000277817 DEFB4AO15263 64 aa2.09□□□□□ -2.07
HERC4-201ENST00000277817 C20orf203Q8NBC4 194 aa2.09□□□□□ -2.07
HERC4-201ENST00000277817 TIMM17AQ99595 171 aa2.09□□□□□ -2.07
HERC4-201ENST00000277817 PRM2P04554 102 aa2.09□□□□□ -2.07
HERC4-201ENST00000277817 BAALC-AS2P0C853 105 aa2.09□□□□□ -2.07
HERC4-201ENST00000277817 ZFAND2AQ8N6M9 145 aa2.09□□□□□ -2.07
HERC4-201ENST00000277817 TRAV13-2A0A0B4J235 113 aa2.09□□□□□ -2.08
HERC4-201ENST00000277817 SOCS3O14543 225 aa2.09□□□□□ -2.08
HERC4-201ENST00000277817 IGHV3-30-3P0DP02 117 aa2.09□□□□□ -2.08
HERC4-201ENST00000277817 EGFEM1PQ0D2K5 195 aa2.09□□□□□ -2.08
HERC4-201ENST00000277817 ANKRD29Q8N6D5 301 aa2.09□□□□□ -2.08
HERC4-201ENST00000277817 Q8N6K4 173 aa2.09□□□□□ -2.08
HERC4-201ENST00000277817 Q8N976 141 aa2.09□□□□□ -2.08
HERC4-201ENST00000277817 DNAJC30Q96LL9 226 aa2.09□□□□□ -2.08
HERC4-201ENST00000277817 CELSR3Q9NYQ7 3312 aa2.09□□□□□ -2.08
HERC4-201ENST00000277817 INAFM2P0DMQ5 153 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 PRR9Q5T870 116 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 SLC25A29Q8N8R3 303 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 C15orf53Q8NAA6 179 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 U3KQK5 164 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 DYNC1H1Q14204 4646 aaKnown RBP2.08□□□□□ -2.08
HERC4-201ENST00000277817 IGHV3OR16-9A0A0B4J2B5 98 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 IFITM1P13164 125 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 APOC4P55056 127 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 DAZ2Q13117 558 aaKnown RBP2.08□□□□□ -2.08
HERC4-201ENST00000277817 DAZ4Q86SG3 579 aaKnown RBP2.08□□□□□ -2.08
HERC4-201ENST00000277817 NDUFA11Q86Y39 141 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 Q8N1X5 172 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 NKAPP1Q8N9T2 125 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 ATP6V0E2Q8NHE4 81 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 DAZ3Q9NR90 486 aaKnown RBP2.08□□□□□ -2.08
HERC4-201ENST00000277817 HHLA3Q9XRX5 114 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 TRAV4A0A0B4J268 109 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 CLPSL1A2RUU4 121 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 CRYBA4P53673 196 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 RPL32P62910 135 aaKnown RBP2.08□□□□□ -2.08
HERC4-201ENST00000277817 HAMPP81172 84 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 Q6ZTI0 123 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 NFE4Q86UQ8 179 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 TEN1Q86WV5 123 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 CLEC2BQ92478 149 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 VSIG2Q96IQ7 327 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 C9orf85Q96MD7 179 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 SND1-IT1Q9HBX3 110 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 ICOSQ9Y6W8 199 aa2.08□□□□□ -2.08
HERC4-201ENST00000277817 IGHV1-58A0A0C4DH39 117 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 A0A1W2PPR1 153 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 PSCAO43653 123 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 C2orf91Q6ZV80 131 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 NRACQ8N912 160 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 WFDC11Q8NEX6 87 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 C4orf3Q8WVX3 66 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms