RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 A0A1W2PNN7 141 aa7.59□□□□□ -1.19
TRAF4-202ENST00000262396 SMIM27A0A1W2PRY6 76 aa7.59□□□□□ -1.19
TRAF4-202ENST00000262396 D6R8Y8 96 aa7.59□□□□□ -1.19
TRAF4-202ENST00000262396 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.59□□□□□ -1.19
TRAF4-202ENST00000262396 IFI27P40305 119 aaPredicted RBP7.59□□□□□ -1.19
TRAF4-202ENST00000262396 RPL39P62891 51 aaKnown RBP7.59□□□□□ -1.19
TRAF4-202ENST00000262396 SMIM2Q9BVW6 85 aa7.59□□□□□ -1.19
TRAF4-202ENST00000262396 A0A087WZ39 114 aa7.58□□□□□ -1.2
TRAF4-202ENST00000262396 F8WDY8 70 aa7.58□□□□□ -1.2
TRAF4-202ENST00000262396 RNF151Q2KHN1 245 aa7.58□□□□□ -1.2
TRAF4-202ENST00000262396 PHF5AQ7RTV0 110 aaKnown RBP7.58□□□□□ -1.2
TRAF4-202ENST00000262396 TRBV24-1A0A075B6N3 115 aa7.57□□□□□ -1.2
TRAF4-202ENST00000262396 PPBPP02775 128 aa7.57□□□□□ -1.2
TRAF4-202ENST00000262396 UBE2BP63146 152 aa7.57□□□□□ -1.2
TRAF4-202ENST00000262396 GAGE2EQ4V326 116 aa7.57□□□□□ -1.2
TRAF4-202ENST00000262396 MRPL35Q9NZE8 188 aaKnown RBP7.57□□□□□ -1.2
TRAF4-202ENST00000262396 GAGE2DQ9UEU5 116 aa7.57□□□□□ -1.2
TRAF4-202ENST00000262396 PSORS1C2Q9UIG4 136 aa7.57□□□□□ -1.2
TRAF4-202ENST00000262396 RPL32P62910 135 aaKnown RBP7.56□□□□□ -1.2
TRAF4-202ENST00000262396 SRSF9Q13242 221 aaKnown RBP eCLIP7.56□□□□□ -1.22e-6■■■□□ 16.3
TRAF4-202ENST00000262396 ODF1Q14990 250 aa7.56□□□□□ -1.2
TRAF4-202ENST00000262396 TMEM136Q6ZRR5 245 aa7.56□□□□□ -1.2
TRAF4-202ENST00000262396 FAM19A5Q7Z5A7 132 aaPredicted RBP7.56□□□□□ -1.2
TRAF4-202ENST00000262396 ORMDL3Q8N138 153 aa7.56□□□□□ -1.2
TRAF4-202ENST00000262396 DIRC1Q969H9 104 aa7.56□□□□□ -1.2
TRAF4-202ENST00000262396 PACRGQ96M98 296 aaPredicted RBP7.56□□□□□ -1.2
TRAF4-202ENST00000262396 SMDT1Q9H4I9 107 aa7.56□□□□□ -1.2
TRAF4-202ENST00000262396 NPYP01303 97 aa7.55□□□□□ -1.2
TRAF4-202ENST00000262396 KRTAP10-8P60410 259 aa7.55□□□□□ -1.2
TRAF4-202ENST00000262396 MRPS36P82909 103 aaKnown RBP7.55□□□□□ -1.2
TRAF4-202ENST00000262396 Q6ZN92 141 aa7.55□□□□□ -1.2
TRAF4-202ENST00000262396 PRELID3AQ96N28 172 aa7.55□□□□□ -1.2
TRAF4-202ENST00000262396 C2orf88Q9BSF0 95 aa7.55□□□□□ -1.2
TRAF4-202ENST00000262396 LOC389332A0A1B0GUA5 103 aa7.54□□□□□ -1.2
TRAF4-202ENST00000262396 PRSS2P07478 247 aa7.54□□□□□ -1.2
TRAF4-202ENST00000262396 UNQ6190/PRO20217Q6UXQ8 127 aa7.54□□□□□ -1.2
TRAF4-202ENST00000262396 CLLU1Q5K131 121 aa7.53□□□□□ -1.2
TRAF4-202ENST00000262396 TEX43Q6ZNM6 134 aa7.53□□□□□ -1.2
TRAF4-202ENST00000262396 TMEM141Q96I45 108 aa7.53□□□□□ -1.2
TRAF4-202ENST00000262396 MAP1LC3AQ9H492 121 aa7.53□□□□□ -1.2
TRAF4-202ENST00000262396 IGHV3OR16-9A0A0B4J2B5 98 aa7.52□□□□□ -1.21
TRAF4-202ENST00000262396 C9JQL5 133 aa7.52□□□□□ -1.21
TRAF4-202ENST00000262396 IGLV7-43P04211 117 aa7.52□□□□□ -1.21
TRAF4-202ENST00000262396 SRSF3P84103 164 aaKnown RBP7.52□□□□□ -1.21
TRAF4-202ENST00000262396 ATP5L2Q7Z4Y8 100 aa7.52□□□□□ -1.21
TRAF4-202ENST00000262396 TOMM7Q9P0U1 55 aa7.52□□□□□ -1.21
TRAF4-202ENST00000262396 TNXBP22105 4242 aa7.51□□□□□ -1.21
TRAF4-202ENST00000262396 M0QXV9 152 aa7.51□□□□□ -1.21
TRAF4-202ENST00000262396 UBE2D1P51668 147 aa7.51□□□□□ -1.21
TRAF4-202ENST00000262396 CKS1BP61024 79 aa7.51□□□□□ -1.21
TRAF4-202ENST00000262396 C10orf25Q5T742 122 aa7.51□□□□□ -1.21
TRAF4-202ENST00000262396 VCX2Q9H322 139 aa7.51□□□□□ -1.21
TRAF4-202ENST00000262396 C6orf48Q9UBA6 75 aa7.51□□□□□ -1.21
TRAF4-202ENST00000262396 CYSLTR1Q9Y271 337 aa7.51□□□□□ -1.21
TRAF4-202ENST00000262396 A0A1B0GXF2 115 aa7.5□□□□□ -1.21
TRAF4-202ENST00000262396 FAM168BA1KXE4 195 aa7.5□□□□□ -1.21
TRAF4-202ENST00000262396 IFITM2Q01629 132 aa7.5□□□□□ -1.21
TRAF4-202ENST00000262396 IGLV4-3A0A075B6K6 122 aa7.49□□□□□ -1.21
TRAF4-202ENST00000262396 TRBV30A0A0K0K1B3 111 aa7.49□□□□□ -1.21
TRAF4-202ENST00000262396 MT-ND4LP03901 98 aa7.49□□□□□ -1.21
TRAF4-202ENST00000262396 TLX1NBP0CAT3 122 aa7.49□□□□□ -1.21
TRAF4-202ENST00000262396 C6orf226Q5I0X4 101 aa7.49□□□□□ -1.21
TRAF4-202ENST00000262396 LAMTOR2Q9Y2Q5 125 aa7.49□□□□□ -1.21
TRAF4-202ENST00000262396 PYGO1Q9Y3Y4 419 aa7.49□□□□□ -1.21
TRAF4-202ENST00000262396 H0Y9J4 135 aa7.48□□□□□ -1.21
TRAF4-202ENST00000262396 ORMDL2Q53FV1 153 aa7.48□□□□□ -1.21
TRAF4-202ENST00000262396 LINC00242Q5T6M2 205 aa7.48□□□□□ -1.21
TRAF4-202ENST00000262396 PRR26Q8N8Z3 221 aa7.48□□□□□ -1.21
TRAF4-202ENST00000262396 NDUFC2-KCTD14E9PQ53 114 aa7.47□□□□□ -1.21
TRAF4-202ENST00000262396 G0S2P27469 103 aa7.47□□□□□ -1.21
TRAF4-202ENST00000262396 PAPPA-AS1Q5QFB9 102 aa7.47□□□□□ -1.21
TRAF4-202ENST00000262396 UQCC3Q6UW78 93 aa7.47□□□□□ -1.21
TRAF4-202ENST00000262396 C2orf82Q6UX34 121 aa7.47□□□□□ -1.21
TRAF4-202ENST00000262396 C2orf66Q6UXQ4 117 aa7.47□□□□□ -1.21
TRAF4-202ENST00000262396 LRP2P98164 4655 aa7.46□□□□□ -1.21
TRAF4-202ENST00000262396 SEC11AP67812 179 aa7.46□□□□□ -1.22
TRAF4-202ENST00000262396 PNRC1Q12796 327 aaPredicted RBP7.46□□□□□ -1.22
TRAF4-202ENST00000262396 Q8N8P6 123 aa7.46□□□□□ -1.22
TRAF4-202ENST00000262396 ANAPC16Q96DE5 110 aa7.46□□□□□ -1.22
TRAF4-202ENST00000262396 ALKBH7Q9BT30 221 aaPredicted RBP7.46□□□□□ -1.22
TRAF4-202ENST00000262396 CTDSP1Q9GZU7 261 aa7.46□□□□□ -1.22
TRAF4-202ENST00000262396 GEMIN7Q9H840 131 aaKnown RBP7.46□□□□□ -1.22
TRAF4-202ENST00000262396 IGLV1-50A0A075B6I6 118 aa7.45□□□□□ -1.22
TRAF4-202ENST00000262396 LBHQ53QV2 105 aaPredicted RBP7.45□□□□□ -1.22
TRAF4-202ENST00000262396 LINC01561Q8N1V8 128 aa7.45□□□□□ -1.22
TRAF4-202ENST00000262396 FAM104AQ969W3 186 aa7.45□□□□□ -1.22
TRAF4-202ENST00000262396 RNF213Q63HN8 5207 aa7.45□□□□□ -1.22
TRAF4-202ENST00000262396 RPL13AP40429 203 aaKnown RBP7.44□□□□□ -1.22
TRAF4-202ENST00000262396 KIAA0087Q14695 138 aa7.44□□□□□ -1.22
TRAF4-202ENST00000262396 ZC2HC1BQ5TFG8 222 aa7.44□□□□□ -1.22
TRAF4-202ENST00000262396 COMMD7Q86VX2 200 aa7.44□□□□□ -1.22
TRAF4-202ENST00000262396 LINC00469Q8N7U9 141 aa7.44□□□□□ -1.22
TRAF4-202ENST00000262396 K7EMI3 77 aa7.43□□□□□ -1.22
TRAF4-202ENST00000262396 HERVK_113P63121 156 aa7.43□□□□□ -1.22
TRAF4-202ENST00000262396 NXT2Q9NPJ8 142 aaKnown RBP7.43□□□□□ -1.22
TRAF4-202ENST00000262396 PRSS47A8MTI9 375 aa7.42□□□□□ -1.22
TRAF4-202ENST00000262396 PRR4Q16378 134 aa7.42□□□□□ -1.22
TRAF4-202ENST00000262396 NPSP0C0P6 89 aa7.41□□□□□ -1.22
TRAF4-202ENST00000262396 C9orf129Q5T035 196 aaKnown RBP7.41□□□□□ -1.22
TRAF4-202ENST00000262396 KRTAP11-1Q8IUC1 163 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms