RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 WNK1Q9H4A3 2382 aa10.47□□□□□ -0.73
CUX2-201ENST00000261726 PRR9Q5T870 116 aa10.47□□□□□ -0.73
CUX2-201ENST00000261726 C5orf42Q9H799 3197 aa10.47□□□□□ -0.73
CUX2-201ENST00000261726 RNASE3P12724 160 aaKnown RBP10.47□□□□□ -0.73
CUX2-201ENST00000261726 KIAA1549Q9HCM3 1950 aa10.47□□□□□ -0.73
CUX2-201ENST00000261726 M0QXV9 152 aa10.47□□□□□ -0.73
CUX2-201ENST00000261726 Q6ZS46 218 aa10.47□□□□□ -0.73
CUX2-201ENST00000261726 LINC00474Q9P2X8 69 aa10.46□□□□□ -0.73
CUX2-201ENST00000261726 LST1O00453 97 aa10.46□□□□□ -0.73
CUX2-201ENST00000261726 Q6ZPA2 131 aa10.46□□□□□ -0.73
CUX2-201ENST00000261726 NUP210LQ5VU65 1888 aa10.46□□□□□ -0.73
CUX2-201ENST00000261726 C1orf195Q5TG92 126 aa10.46□□□□□ -0.74
CUX2-201ENST00000261726 IGHV6-1A0A0B4J1U7 121 aa10.46□□□□□ -0.74
CUX2-201ENST00000261726 SPINK1P00995 79 aa10.45□□□□□ -0.74
CUX2-201ENST00000261726 LINC01006Q8NI28 216 aa10.45□□□□□ -0.74
CUX2-201ENST00000261726 EBI3Q14213 229 aa10.45□□□□□ -0.74
CUX2-201ENST00000261726 NRACQ8N912 160 aa10.45□□□□□ -0.74
CUX2-201ENST00000261726 CYSRT1A8MQ03 144 aa10.45□□□□□ -0.74
CUX2-201ENST00000261726 PRYO14603 147 aa10.45□□□□□ -0.74
CUX2-201ENST00000261726 ZNF843Q8N446 348 aa10.45□□□□□ -0.74
CUX2-201ENST00000261726 ZNF295-AS1Q8N0V1 137 aa10.45□□□□□ -0.74
CUX2-201ENST00000261726 COX7CP15954 63 aa10.44□□□□□ -0.74
CUX2-201ENST00000261726 COX17Q14061 63 aa10.44□□□□□ -0.74
CUX2-201ENST00000261726 OXLD1Q5BKU9 147 aa10.44□□□□□ -0.74
CUX2-201ENST00000261726 SOSTDC1Q6X4U4 206 aa10.44□□□□□ -0.74
CUX2-201ENST00000261726 PSMG3-AS1Q96PY0 264 aa10.44□□□□□ -0.74
CUX2-201ENST00000261726 TECTAO75443 2155 aa10.44□□□□□ -0.74
CUX2-201ENST00000261726 NUPR2A6NF83 97 aa10.44□□□□□ -0.74
CUX2-201ENST00000261726 LINC00208Q96KT6 92 aa10.44□□□□□ -0.74
CUX2-201ENST00000261726 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.44□□□□□ -0.74
CUX2-201ENST00000261726 TRBV7-6A0A0J9YX20 115 aa10.43□□□□□ -0.74
CUX2-201ENST00000261726 C9orf116Q5BN46 136 aaPredicted RBP10.43□□□□□ -0.74
CUX2-201ENST00000261726 FAM208BQ5VWN6 2430 aa10.43□□□□□ -0.74
CUX2-201ENST00000261726 IGLV2-11P01706 119 aa10.42□□□□□ -0.74
CUX2-201ENST00000261726 HIVEP2P31629 2446 aa10.42□□□□□ -0.74
CUX2-201ENST00000261726 RPL28P46779 137 aaKnown RBP10.41□□□□□ -0.74
CUX2-201ENST00000261726 EIF4EBP1Q13541 118 aaPredicted RBP10.41□□□□□ -0.74
CUX2-201ENST00000261726 PCOTHQ58A44 107 aa10.41□□□□□ -0.74
CUX2-201ENST00000261726 C11orf21Q9P2W6 132 aa10.41□□□□□ -0.74
CUX2-201ENST00000261726 LINC00694P0DN24 101 aa10.41□□□□□ -0.74
CUX2-201ENST00000261726 IMUPQ9GZP8 106 aa10.41□□□□□ -0.74
CUX2-201ENST00000261726 GAS8-AS1O95177 125 aa10.41□□□□□ -0.74
CUX2-201ENST00000261726 REG3GQ6UW15 175 aa10.41□□□□□ -0.74
CUX2-201ENST00000261726 PTPRQQ9UMZ3 2332 aa10.41□□□□□ -0.74
CUX2-201ENST00000261726 MRGPRG-AS1Q2M3A8 158 aa10.4□□□□□ -0.74
CUX2-201ENST00000261726 Q8IZM0 81 aa10.4□□□□□ -0.74
CUX2-201ENST00000261726 MRPS36P82909 103 aaKnown RBP10.4□□□□□ -0.74
CUX2-201ENST00000261726 UNQ6190/PRO20217Q6UXQ8 127 aa10.4□□□□□ -0.74
CUX2-201ENST00000261726 C6orf223Q8N319 242 aa10.4□□□□□ -0.74
CUX2-201ENST00000261726 C11orf71Q6IPW1 123 aa10.4□□□□□ -0.74
CUX2-201ENST00000261726 PCNX3Q9H6A9 2034 aa10.4□□□□□ -0.75
CUX2-201ENST00000261726 IGLV5-52A0A0A0MRZ9 124 aa10.4□□□□□ -0.75
CUX2-201ENST00000261726 C1orf137Q5JT78 98 aa10.39□□□□□ -0.75
CUX2-201ENST00000261726 C2orf91Q6ZV80 131 aa10.39□□□□□ -0.75
CUX2-201ENST00000261726 NTM-AS1Q6ZSK4 140 aa10.39□□□□□ -0.75
CUX2-201ENST00000261726 PMAIP1Q13794 54 aa10.38□□□□□ -0.75
CUX2-201ENST00000261726 CDC42SE2Q9NRR3 84 aa10.38□□□□□ -0.75
CUX2-201ENST00000261726 XGP55808 180 aa10.38□□□□□ -0.75
CUX2-201ENST00000261726 PRR3P79522 188 aaKnown RBP10.38□□□□□ -0.75
CUX2-201ENST00000261726 Q6JHZ5 121 aa10.38□□□□□ -0.75
CUX2-201ENST00000261726 CRIP2P52943 208 aaPredicted RBP10.38□□□□□ -0.75
CUX2-201ENST00000261726 LINC01547P58512 204 aaPredicted RBP10.38□□□□□ -0.75
CUX2-201ENST00000261726 FREM1Q5H8C1 2179 aa10.38□□□□□ -0.75
CUX2-201ENST00000261726 PRR14LQ5THK1 2151 aa10.37□□□□□ -0.75
CUX2-201ENST00000261726 SORL1Q92673 2214 aa10.37□□□□□ -0.75
CUX2-201ENST00000261726 TRBV10-3A0A0K0K1G6 114 aa10.37□□□□□ -0.75
CUX2-201ENST00000261726 KLLNB2CW77 178 aa10.36□□□□□ -0.75
CUX2-201ENST00000261726 LINC01556Q5JQF7 62 aa10.36□□□□□ -0.75
CUX2-201ENST00000261726 EDN2P20800 178 aa10.36□□□□□ -0.75
CUX2-201ENST00000261726 BEAN1Q3B7T3 259 aa10.36□□□□□ -0.75
CUX2-201ENST00000261726 DEFB116Q30KQ4 102 aa10.36□□□□□ -0.75
CUX2-201ENST00000261726 DSCAMO60469 2012 aa10.36□□□□□ -0.75
CUX2-201ENST00000261726 SMR3AQ99954 134 aa10.36□□□□□ -0.75
CUX2-201ENST00000261726 BRI3O95415 125 aa10.36□□□□□ -0.75
CUX2-201ENST00000261726 A0A087WVE0 104 aa10.35□□□□□ -0.75
CUX2-201ENST00000261726 FSHBP01225 129 aa10.35□□□□□ -0.75
CUX2-201ENST00000261726 BPTFQ12830 3046 aa10.35□□□□□ -0.75
CUX2-201ENST00000261726 Q8N814 137 aa10.35□□□□□ -0.75
CUX2-201ENST00000261726 POLR2KP53803 58 aaKnown RBP10.34□□□□□ -0.75
CUX2-201ENST00000261726 A0A087WYN8 130 aa10.34□□□□□ -0.75
CUX2-201ENST00000261726 COL4A2P08572 1712 aa10.34□□□□□ -0.75
CUX2-201ENST00000261726 SMIM26A0A096LP01 95 aa10.34□□□□□ -0.75
CUX2-201ENST00000261726 PSPHP1O15172 72 aa10.34□□□□□ -0.75
CUX2-201ENST00000261726 PLA2G2AP14555 144 aa10.34□□□□□ -0.75
CUX2-201ENST00000261726 ZFHX2Q9C0A1 2572 aaPredicted RBP10.34□□□□□ -0.75
CUX2-201ENST00000261726 COX6A2Q02221 97 aa10.33□□□□□ -0.76
CUX2-201ENST00000261726 TRAV7A0A075B6U4 112 aa10.33□□□□□ -0.76
CUX2-201ENST00000261726 EML5Q05BV3 1969 aa10.33□□□□□ -0.76
CUX2-201ENST00000261726 CRIP3Q6Q6R5 217 aa10.33□□□□□ -0.76
CUX2-201ENST00000261726 Q9BRP9 147 aa10.33□□□□□ -0.76
CUX2-201ENST00000261726 FSTL3O95633 263 aa10.33□□□□□ -0.76
CUX2-201ENST00000261726 C10orf142B7Z368 130 aa10.32□□□□□ -0.76
CUX2-201ENST00000261726 IGLV1-40P01703 118 aa10.31□□□□□ -0.76
CUX2-201ENST00000261726 SBSPONQ8IVN8 264 aa10.31□□□□□ -0.76
CUX2-201ENST00000261726 LINC00242Q5T6M2 205 aa10.31□□□□□ -0.76
CUX2-201ENST00000261726 Q8N6K4 173 aa10.31□□□□□ -0.76
CUX2-201ENST00000261726 EGFEM1PQ0D2K5 195 aa10.3□□□□□ -0.76
CUX2-201ENST00000261726 H0Y9P7 68 aa10.29□□□□□ -0.76
CUX2-201ENST00000261726 IGLV4-60A0A075B6I1 120 aa10.29□□□□□ -0.76
CUX2-201ENST00000261726 PLXNB1O43157 2135 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms