RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 KIR2DL5BA0A0G2JPC4 375 aa3.91□□□□□ -1.78
TOPBP1-201ENST00000260810 MPV17L2Q567V2 206 aa3.91□□□□□ -1.78
TOPBP1-201ENST00000260810 KIR2DL5AQ8N109 375 aa3.91□□□□□ -1.78
TOPBP1-201ENST00000260810 RNASE8Q8TDE3 154 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-201ENST00000260810 TRAV12-3A0A0B4J271 114 aa3.91□□□□□ -1.78
TOPBP1-201ENST00000260810 H7C2G1 150 aa3.91□□□□□ -1.78
TOPBP1-201ENST00000260810 NDUFA7O95182 113 aa3.91□□□□□ -1.78
TOPBP1-201ENST00000260810 RPL35AP18077 110 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-201ENST00000260810 GAGE13Q4V321 117 aa3.91□□□□□ -1.78
TOPBP1-201ENST00000260810 HLA-DRB4P13762 266 aa3.91□□□□□ -1.78
TOPBP1-201ENST00000260810 HLA-DRB4X5D2U9 266 aa3.91□□□□□ -1.78
TOPBP1-201ENST00000260810 CTRLP40313 264 aa3.91□□□□□ -1.78
TOPBP1-201ENST00000260810 PYY3Q5JQD4 70 aa3.91□□□□□ -1.78
TOPBP1-201ENST00000260810 MUC21Q5SSG8 566 aa3.91□□□□□ -1.78
TOPBP1-201ENST00000260810 KRTAP11-1Q8IUC1 163 aa3.91□□□□□ -1.78
TOPBP1-201ENST00000260810 DSCR8Q96T75 97 aa3.91□□□□□ -1.78
TOPBP1-201ENST00000260810 IGHV4-4A0A075B6R2 117 aa3.9□□□□□ -1.78
TOPBP1-201ENST00000260810 C4orf48Q5BLP8 95 aa3.9□□□□□ -1.78
TOPBP1-201ENST00000260810 PRO1933Q9H354 126 aa3.9□□□□□ -1.78
TOPBP1-201ENST00000260810 FUSP35637 526 aaKnown RBP eCLIP3.9□□□□□ -1.78
TOPBP1-201ENST00000260810 LINC00474Q9P2X8 69 aa3.9□□□□□ -1.78
TOPBP1-201ENST00000260810 D6R8Y8 96 aa3.9□□□□□ -1.79
TOPBP1-201ENST00000260810 GNRH2O43555 120 aa3.9□□□□□ -1.79
TOPBP1-201ENST00000260810 GAGE1Q13065 139 aa3.9□□□□□ -1.79
TOPBP1-201ENST00000260810 B9D2Q9BPU9 175 aa3.9□□□□□ -1.79
TOPBP1-201ENST00000260810 GSN-AS1Q9NRJ2 163 aa3.9□□□□□ -1.79
TOPBP1-201ENST00000260810 C22orf24Q9Y442 160 aa3.9□□□□□ -1.79
TOPBP1-201ENST00000260810 TRAV12-1A0A0B4J245 112 aa3.9□□□□□ -1.79
TOPBP1-201ENST00000260810 TRAV4A0A0B4J268 109 aa3.9□□□□□ -1.79
TOPBP1-201ENST00000260810 LINC01620Q4KN68 170 aa3.9□□□□□ -1.79
TOPBP1-201ENST00000260810 ATP6V0E2Q8NHE4 81 aa3.9□□□□□ -1.79
TOPBP1-201ENST00000260810 C9orf85Q96MD7 179 aa3.9□□□□□ -1.79
TOPBP1-201ENST00000260810 NDUFA1O15239 70 aa3.89□□□□□ -1.79
TOPBP1-201ENST00000260810 NUP35Q8NFH5 326 aa3.89□□□□□ -1.79
TOPBP1-201ENST00000260810 SNAI2O43623 268 aa3.89□□□□□ -1.79
TOPBP1-201ENST00000260810 A0A0J9YX75 114 aa3.89□□□□□ -1.79
TOPBP1-201ENST00000260810 ARMS2P0C7Q2 107 aa3.89□□□□□ -1.79
TOPBP1-201ENST00000260810 ESDP10768 282 aa3.89□□□□□ -1.79
TOPBP1-201ENST00000260810 SERF1AO75920 110 aa3.89□□□□□ -1.79
TOPBP1-201ENST00000260810 SLPIP03973 132 aa3.89□□□□□ -1.79
TOPBP1-201ENST00000260810 MIFP14174 115 aa3.89□□□□□ -1.79
TOPBP1-201ENST00000260810 TIRAPP58753 221 aa3.89□□□□□ -1.79
TOPBP1-201ENST00000260810 C2orf82Q6UX34 121 aa3.89□□□□□ -1.79
TOPBP1-201ENST00000260810 ZC2HC1BQ5TFG8 222 aa3.89□□□□□ -1.79
TOPBP1-201ENST00000260810 SBSPONQ8IVN8 264 aa3.89□□□□□ -1.79
TOPBP1-201ENST00000260810 VSIG2Q96IQ7 327 aa3.89□□□□□ -1.79
TOPBP1-201ENST00000260810 HHLA3Q9XRX5 114 aa3.89□□□□□ -1.79
TOPBP1-201ENST00000260810 TRAV8-3A0A0A6YYJ7 113 aa3.88□□□□□ -1.79
TOPBP1-201ENST00000260810 JMJD7-PLA2G4BH0Y9G9 81 aa3.88□□□□□ -1.79
TOPBP1-201ENST00000260810 SYS1-DBNDD2H3BUS1 97 aa3.88□□□□□ -1.79
TOPBP1-201ENST00000260810 TMEM263Q8WUH6 116 aaKnown RBP3.88□□□□□ -1.79
TOPBP1-201ENST00000260810 ZFAND6Q6FIF0 208 aa3.88□□□□□ -1.79
TOPBP1-201ENST00000260810 CHCHD7Q9BUK0 85 aa3.88□□□□□ -1.79
TOPBP1-201ENST00000260810 TRAV12-2A0A075B6T6 113 aa3.88□□□□□ -1.79
TOPBP1-201ENST00000260810 IGHV1-58A0A0C4DH39 117 aa3.88□□□□□ -1.79
TOPBP1-201ENST00000260810 A0A0J9YXY3 114 aa3.88□□□□□ -1.79
TOPBP1-201ENST00000260810 ETDCA0A1B0GVM5 59 aa3.88□□□□□ -1.79
TOPBP1-201ENST00000260810 COX7A2LO14548 114 aa3.88□□□□□ -1.79
TOPBP1-201ENST00000260810 C2orf66Q6UXQ4 117 aa3.88□□□□□ -1.79
TOPBP1-201ENST00000260810 TIMM17AQ99595 171 aa3.88□□□□□ -1.79
TOPBP1-201ENST00000260810 SIGMAR1Q99720 223 aa3.88□□□□□ -1.79
TOPBP1-201ENST00000260810 MUC21A0A0G2JKD1 596 aa3.87□□□□□ -1.79
TOPBP1-201ENST00000260810 MUC21A0A140T8X8 626 aa3.87□□□□□ -1.79
TOPBP1-201ENST00000260810 K7EP13 123 aa3.87□□□□□ -1.79
TOPBP1-201ENST00000260810 ORMDL1Q9P0S3 153 aa3.87□□□□□ -1.79
TOPBP1-201ENST00000260810 F8VRH5 84 aa3.87□□□□□ -1.79
TOPBP1-201ENST00000260810 F8W1H4 67 aa3.87□□□□□ -1.79
TOPBP1-201ENST00000260810 UBE2BP63146 152 aa3.87□□□□□ -1.79
TOPBP1-201ENST00000260810 MAP6D1Q9H9H5 199 aa3.87□□□□□ -1.79
TOPBP1-201ENST00000260810 RETNQ9HD89 108 aa3.87□□□□□ -1.79
TOPBP1-201ENST00000260810 TP53TG1Q9Y2A0 90 aa3.87□□□□□ -1.79
TOPBP1-201ENST00000260810 SDHAF1A6NFY7 115 aa3.87□□□□□ -1.79
TOPBP1-201ENST00000260810 FGF6P10767 208 aa3.87□□□□□ -1.79
TOPBP1-201ENST00000260810 GAGE2BQ13066 116 aa3.86□□□□□ -1.79
TOPBP1-201ENST00000260810 TRAV10A0A0B4J240 114 aa3.86□□□□□ -1.79
TOPBP1-201ENST00000260810 GAGE12JA6NER3 117 aa3.86□□□□□ -1.79
TOPBP1-201ENST00000260810 DEFB130BP0DP73 79 aa3.86□□□□□ -1.79
TOPBP1-201ENST00000260810 DEFB130AP0DP74 79 aa3.86□□□□□ -1.79
TOPBP1-201ENST00000260810 GAGE4Q13068 117 aa3.86□□□□□ -1.79
TOPBP1-201ENST00000260810 GAGE5Q13069 117 aa3.86□□□□□ -1.79
TOPBP1-201ENST00000260810 C14orf178Q8N769 122 aaPredicted RBP3.86□□□□□ -1.79
TOPBP1-201ENST00000260810 C7orf33Q8WU49 177 aa3.86□□□□□ -1.79
TOPBP1-201ENST00000260810 LOC100131303A0A0U1RQF7 123 aa3.86□□□□□ -1.79
TOPBP1-201ENST00000260810 TMEM258P61165 79 aa3.86□□□□□ -1.79
TOPBP1-201ENST00000260810 CASC10Q5T4H9 136 aa3.86□□□□□ -1.79
TOPBP1-201ENST00000260810 Q6ZRN7 208 aaPredicted RBP3.86□□□□□ -1.79
TOPBP1-201ENST00000260810 NUPR2A6NF83 97 aa3.85□□□□□ -1.79
TOPBP1-201ENST00000260810 NHLRC4P0CG21 123 aaPredicted RBP3.85□□□□□ -1.79
TOPBP1-201ENST00000260810 ANXA2RQ3ZCQ2 193 aa3.85□□□□□ -1.79
TOPBP1-201ENST00000260810 ATP5EP2Q5VTU8 51 aa3.85□□□□□ -1.79
TOPBP1-201ENST00000260810 PPDPFLQ8WWR9 84 aa3.85□□□□□ -1.79
TOPBP1-201ENST00000260810 CARD19Q96LW7 228 aa3.85□□□□□ -1.79
TOPBP1-201ENST00000260810 SS18L2Q9UHA2 77 aa3.85□□□□□ -1.79
TOPBP1-201ENST00000260810 PRO0255Q9UI72 69 aa3.85□□□□□ -1.79
TOPBP1-201ENST00000260810 PCP4P48539 62 aa3.85□□□□□ -1.79
TOPBP1-201ENST00000260810 WFDC2Q14508 124 aa3.85□□□□□ -1.79
TOPBP1-201ENST00000260810 ZNRF2Q8NHG8 242 aa3.85□□□□□ -1.79
TOPBP1-201ENST00000260810 PANO1I0J062 215 aa3.85□□□□□ -1.79
TOPBP1-201ENST00000260810 DEFB104AQ8WTQ1 72 aa3.85□□□□□ -1.79
TOPBP1-201ENST00000260810 TRAV26-2A0A0B4J265 109 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms