RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 UBE2L6O14933 153 aa10.8□□□□□ -0.68
DDX56-201ENST00000258772 MEIG1Q5JSS6 88 aa10.8□□□□□ -0.68
DDX56-201ENST00000258772 LINC01006Q8NI28 216 aa10.8□□□□□ -0.68
DDX56-201ENST00000258772 TRGV2A0A075B6R0 118 aa10.8□□□□□ -0.68
DDX56-201ENST00000258772 GAGE7O76087 117 aa10.8□□□□□ -0.68
DDX56-201ENST00000258772 GAGE12FP0CL80 117 aa10.8□□□□□ -0.68
DDX56-201ENST00000258772 GAGE12GP0CL81 117 aa10.8□□□□□ -0.68
DDX56-201ENST00000258772 GAGE12IP0CL82 117 aa10.8□□□□□ -0.68
DDX56-201ENST00000258772 FLNAP21333 2647 aaKnown RBP10.8□□□□□ -0.68
DDX56-201ENST00000258772 RPL35AP18077 110 aaKnown RBP10.79□□□□□ -0.68
DDX56-201ENST00000258772 LOC100131303A0A0U1RQF7 123 aa10.79□□□□□ -0.68
DDX56-201ENST00000258772 HERV-K104P63124 156 aa10.79□□□□□ -0.68
DDX56-201ENST00000258772 C19orf73Q9NVV2 129 aa10.79□□□□□ -0.68
DDX56-201ENST00000258772 SETXQ7Z333 2677 aaKnown RBP10.78□□□□□ -0.68
DDX56-201ENST00000258772 TRBV6-4A0A1B0GX49 114 aa10.78□□□□□ -0.68
DDX56-201ENST00000258772 SNCGO76070 127 aa10.78□□□□□ -0.68
DDX56-201ENST00000258772 IGLV1-51P01701 117 aa10.78□□□□□ -0.68
DDX56-201ENST00000258772 FAM110AQ9BQ89 295 aa10.78□□□□□ -0.68
DDX56-201ENST00000258772 OVOL2Q9BRP0 275 aa10.78□□□□□ -0.68
DDX56-201ENST00000258772 COX7A2LO14548 114 aa10.77□□□□□ -0.69
DDX56-201ENST00000258772 CRLF1O75462 422 aa10.77□□□□□ -0.69
DDX56-201ENST00000258772 CSNK1G2-AS1Q8NCQ2 148 aa10.77□□□□□ -0.69
DDX56-201ENST00000258772 DEFB121Q5J5C9 76 aa10.76□□□□□ -0.69
DDX56-201ENST00000258772 C16orf95Q9H693 158 aa10.76□□□□□ -0.69
DDX56-201ENST00000258772 TRGV4A0A0C4DH28 118 aa10.75□□□□□ -0.69
DDX56-201ENST00000258772 PLA2G2AP14555 144 aa10.75□□□□□ -0.69
DDX56-201ENST00000258772 GAGE2BQ13066 116 aa10.75□□□□□ -0.69
DDX56-201ENST00000258772 GAGE2EQ4V326 116 aa10.75□□□□□ -0.69
DDX56-201ENST00000258772 GAGE2DQ9UEU5 116 aa10.75□□□□□ -0.69
DDX56-201ENST00000258772 RNASE1P07998 156 aaKnown RBP10.74□□□□□ -0.69
DDX56-201ENST00000258772 PPDPFQ9H3Y8 114 aa10.74□□□□□ -0.69
DDX56-201ENST00000258772 TRAV26-1A0A087WT03 109 aa10.74□□□□□ -0.69
DDX56-201ENST00000258772 GAGE6Q13070 117 aa10.74□□□□□ -0.69
DDX56-201ENST00000258772 ACANP16112 2415 aa10.73□□□□□ -0.69
DDX56-201ENST00000258772 NIPBLQ6KC79 2804 aaeCLIP10.73□□□□□ -0.69
DDX56-201ENST00000258772 KRTAP1-1Q07627 177 aa10.73□□□□□ -0.69
DDX56-201ENST00000258772 C15orf53Q8NAA6 179 aa10.73□□□□□ -0.69
DDX56-201ENST00000258772 FHL2Q14192 279 aa10.73□□□□□ -0.69
DDX56-201ENST00000258772 COX7B2Q8TF08 81 aa10.73□□□□□ -0.69
DDX56-201ENST00000258772 ANAPC13Q9BS18 74 aa10.72□□□□□ -0.69
DDX56-201ENST00000258772 IGLV4-60A0A075B6I1 120 aa10.72□□□□□ -0.69
DDX56-201ENST00000258772 TRBV6-8A0A0A6YYG3 113 aa10.72□□□□□ -0.69
DDX56-201ENST00000258772 FAM240AA0A1B0GVK7 77 aa10.72□□□□□ -0.69
DDX56-201ENST00000258772 HIST2H2BCQ6DN03 193 aa10.72□□□□□ -0.69
DDX56-201ENST00000258772 IGKV3OR2-268A0A0C4DH90 116 aa10.71□□□□□ -0.69
DDX56-201ENST00000258772 Q6Q795 121 aa10.71□□□□□ -0.69
DDX56-201ENST00000258772 MTORP42345 2549 aa10.71□□□□□ -0.7
DDX56-201ENST00000258772 TOMM7Q9P0U1 55 aa10.7□□□□□ -0.7
DDX56-201ENST00000258772 IGHV3OR16-9A0A0B4J2B5 98 aa10.69□□□□□ -0.7
DDX56-201ENST00000258772 MRPL23Q16540 153 aaKnown RBP10.69□□□□□ -0.7
DDX56-201ENST00000258772 MIR7-3HGQ8N6C7 128 aa10.69□□□□□ -0.7
DDX56-201ENST00000258772 CHCHD5Q9BSY4 110 aa10.69□□□□□ -0.7
DDX56-201ENST00000258772 TRACP01848 142 aa10.69□□□□□ -0.7
DDX56-201ENST00000258772 TRAV13-2A0A0B4J235 113 aa10.68□□□□□ -0.7
DDX56-201ENST00000258772 PF4P02776 101 aa10.68□□□□□ -0.7
DDX56-201ENST00000258772 NHLRC4P0CG21 123 aaPredicted RBP10.68□□□□□ -0.7
DDX56-201ENST00000258772 NDUFV3P56181 108 aaKnown RBP10.67□□□□□ -0.7
DDX56-201ENST00000258772 TTC32Q5I0X7 151 aa10.67□□□□□ -0.7
DDX56-201ENST00000258772 FAM218AQ96MZ4 157 aa10.67□□□□□ -0.7
DDX56-201ENST00000258772 F8WDY8 70 aa10.67□□□□□ -0.7
DDX56-201ENST00000258772 LINC00337Q8N6G1 96 aa10.67□□□□□ -0.7
DDX56-201ENST00000258772 IGKV2-28A0A075B6P5 120 aa10.66□□□□□ -0.7
DDX56-201ENST00000258772 IGKV2D-28P01615 120 aa10.66□□□□□ -0.7
DDX56-201ENST00000258772 BAALC-AS2P0C853 105 aa10.66□□□□□ -0.7
DDX56-201ENST00000258772 RPL28P46779 137 aaKnown RBP10.66□□□□□ -0.7
DDX56-201ENST00000258772 FAM222AQ5U5X8 452 aa10.66□□□□□ -0.7
DDX56-201ENST00000258772 SND1-IT1Q9HBX3 110 aa10.66□□□□□ -0.7
DDX56-201ENST00000258772 A0A087WZ39 114 aa10.66□□□□□ -0.7
DDX56-201ENST00000258772 CRPP02741 224 aa10.66□□□□□ -0.7
DDX56-201ENST00000258772 LINC00158P58513 81 aa10.66□□□□□ -0.7
DDX56-201ENST00000258772 ANK3Q12955 4377 aaKnown RBP10.65□□□□□ -0.7
DDX56-201ENST00000258772 DEFB130BP0DP73 79 aa10.65□□□□□ -0.7
DDX56-201ENST00000258772 DEFB130AP0DP74 79 aa10.65□□□□□ -0.7
DDX56-201ENST00000258772 PDZD2O15018 2839 aa10.65□□□□□ -0.71
DDX56-201ENST00000258772 C5orf38Q86SI9 138 aa10.64□□□□□ -0.71
DDX56-201ENST00000258772 FN1P02751 2386 aaKnown RBP10.64□□□□□ -0.71
DDX56-201ENST00000258772 KIR2DL5BQ8NHK3 375 aa10.64□□□□□ -0.71
DDX56-201ENST00000258772 ACYP1P07311 99 aa10.63□□□□□ -0.71
DDX56-201ENST00000258772 CCL18P55774 89 aa10.63□□□□□ -0.71
DDX56-201ENST00000258772 HILS1P60008 231 aa10.63□□□□□ -0.71
DDX56-201ENST00000258772 C22orf24Q9Y442 160 aa10.63□□□□□ -0.71
DDX56-201ENST00000258772 LINC00959A0A1B0GUT2 108 aa10.63□□□□□ -0.71
DDX56-201ENST00000258772 IBA57-AS1B1ANH7 110 aa10.63□□□□□ -0.71
DDX56-201ENST00000258772 LINC00612Q8N6U2 182 aa10.62□□□□□ -0.71
DDX56-201ENST00000258772 GYPEP15421 78 aa10.61□□□□□ -0.71
DDX56-201ENST00000258772 PFN2P35080 140 aa10.61□□□□□ -0.71
DDX56-201ENST00000258772 SMIM11BQ8TCY0 68 aa10.6□□□□□ -0.71
DDX56-201ENST00000258772 Q9HAA7 133 aa10.6□□□□□ -0.71
DDX56-201ENST00000258772 TENM4Q6N022 2769 aa10.59□□□□□ -0.71
DDX56-201ENST00000258772 C6orf226Q5I0X4 101 aa10.59□□□□□ -0.71
DDX56-201ENST00000258772 TRBV7-7A0A0K0K1E9 115 aa10.58□□□□□ -0.72
DDX56-201ENST00000258772 A0A1B0GUV1 79 aa10.58□□□□□ -0.72
DDX56-201ENST00000258772 KRTAP10-3P60369 221 aa10.58□□□□□ -0.72
DDX56-201ENST00000258772 ITPR2Q14571 2701 aa10.58□□□□□ -0.72
DDX56-201ENST00000258772 MALP21145 153 aa10.58□□□□□ -0.72
DDX56-201ENST00000258772 X6R8D5 127 aa10.57□□□□□ -0.72
DDX56-201ENST00000258772 WIPF1O43516 503 aa10.57□□□□□ -0.72
DDX56-201ENST00000258772 XCL1P47992 114 aa10.57□□□□□ -0.72
DDX56-201ENST00000258772 SS18Q15532 418 aa10.57□□□□□ -0.72
DDX56-201ENST00000258772 A0A087WYN8 130 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 234 ms