RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 FASNP49327 2511 aaKnown RBP3.43□□□□□ -1.86
USP44-201ENST00000258499 CHD6Q8TD26 2715 aa3.43□□□□□ -1.86
USP44-201ENST00000258499 NDUFV3P56181 108 aaKnown RBP3.43□□□□□ -1.86
USP44-201ENST00000258499 CFAP46Q8IYW2 2715 aa3.43□□□□□ -1.86
USP44-201ENST00000258499 DAZ2Q13117 558 aaKnown RBP3.43□□□□□ -1.86
USP44-201ENST00000258499 ODF3L2Q3SX64 289 aa3.43□□□□□ -1.86
USP44-201ENST00000258499 LINC00242Q5T6M2 205 aa3.43□□□□□ -1.86
USP44-201ENST00000258499 HIST2H2BCQ6DN03 193 aa3.43□□□□□ -1.86
USP44-201ENST00000258499 DAZ4Q86SG3 579 aaKnown RBP3.43□□□□□ -1.86
USP44-201ENST00000258499 RNF152Q8N8N0 203 aa3.43□□□□□ -1.86
USP44-201ENST00000258499 DAZ3Q9NR90 486 aaKnown RBP3.43□□□□□ -1.86
USP44-201ENST00000258499 FLNAP21333 2647 aaKnown RBP3.43□□□□□ -1.86
USP44-201ENST00000258499 FAM236AA0A1B0GUQ0 79 aa3.43□□□□□ -1.86
USP44-201ENST00000258499 FAM236BA0A1B0GV22 79 aa3.43□□□□□ -1.86
USP44-201ENST00000258499 NDUFA1O15239 70 aa3.43□□□□□ -1.86
USP44-201ENST00000258499 ATP5G1P05496 136 aa3.43□□□□□ -1.86
USP44-201ENST00000258499 MALP21145 153 aa3.43□□□□□ -1.86
USP44-201ENST00000258499 TMEM86BQ8N661 226 aa3.43□□□□□ -1.86
USP44-201ENST00000258499 IGLV10-54A0A075B6I4 117 aa3.42□□□□□ -1.86
USP44-201ENST00000258499 LST1O00453 97 aa3.42□□□□□ -1.86
USP44-201ENST00000258499 WFDC11Q8NEX6 87 aa3.42□□□□□ -1.86
USP44-201ENST00000258499 SPANXDQ9BXN6 97 aa3.42□□□□□ -1.86
USP44-201ENST00000258499 KRTAP4-7Q9BYR0 210 aa3.42□□□□□ -1.86
USP44-201ENST00000258499 SPANXCQ9NY87 97 aa3.42□□□□□ -1.86
USP44-201ENST00000258499 TRAV13-2A0A0B4J235 113 aa3.42□□□□□ -1.86
USP44-201ENST00000258499 DEFB4AO15263 64 aa3.42□□□□□ -1.86
USP44-201ENST00000258499 EIF4EBP3O60516 100 aaPredicted RBP3.42□□□□□ -1.86
USP44-201ENST00000258499 PLA2G2AP14555 144 aa3.42□□□□□ -1.86
USP44-201ENST00000258499 TEX15Q9BXT5 2789 aa3.42□□□□□ -1.86
USP44-201ENST00000258499 DNAJC9-AS1A6NH13 148 aa3.42□□□□□ -1.86
USP44-201ENST00000258499 COX7A2LO14548 114 aa3.42□□□□□ -1.86
USP44-201ENST00000258499 TIRAPP58753 221 aa3.42□□□□□ -1.86
USP44-201ENST00000258499 HIST1H4AP62805 103 aaKnown RBP3.42□□□□□ -1.86
USP44-201ENST00000258499 SMIM20Q8N5G0 67 aa3.42□□□□□ -1.86
USP44-201ENST00000258499 COX7B2Q8TF08 81 aa3.42□□□□□ -1.86
USP44-201ENST00000258499 TRBV10-1A0A0K0K1A3 114 aa3.41□□□□□ -1.86
USP44-201ENST00000258499 CCDC179H3BU77 68 aa3.41□□□□□ -1.86
USP44-201ENST00000258499 HERV-K104P63124 156 aa3.41□□□□□ -1.86
USP44-201ENST00000258499 C1orf158Q8N1D5 194 aa3.41□□□□□ -1.86
USP44-201ENST00000258499 EDA2RQ9HAV5 297 aa3.41□□□□□ -1.86
USP44-201ENST00000258499 IGSF10Q6WRI0 2623 aa3.41□□□□□ -1.86
USP44-201ENST00000258499 SMIM1B2RUZ4 78 aa3.41□□□□□ -1.86
USP44-201ENST00000258499 LECT2O14960 151 aa3.41□□□□□ -1.86
USP44-201ENST00000258499 INAFM2P0DMQ5 153 aa3.41□□□□□ -1.86
USP44-201ENST00000258499 GYPEP15421 78 aa3.41□□□□□ -1.86
USP44-201ENST00000258499 C9orf153Q5TBE3 101 aa3.41□□□□□ -1.86
USP44-201ENST00000258499 IGKV3D-7A0A0C4DH55 119 aa3.41□□□□□ -1.86
USP44-201ENST00000258499 SS18Q15532 418 aa3.41□□□□□ -1.86
USP44-201ENST00000258499 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.41□□□□□ -1.86
USP44-201ENST00000258499 ITPR3Q14573 2671 aa3.41□□□□□ -1.86
USP44-201ENST00000258499 S100A7L2Q5SY68 101 aa3.41□□□□□ -1.86
USP44-201ENST00000258499 C11orf72Q8NBR9 251 aa3.41□□□□□ -1.86
USP44-201ENST00000258499 C16orf74Q96GX8 76 aa3.41□□□□□ -1.86
USP44-201ENST00000258499 UTP20O75691 2785 aaKnown RBP3.4□□□□□ -1.86
USP44-201ENST00000258499 ANGP03950 147 aaKnown RBP3.4□□□□□ -1.86
USP44-201ENST00000258499 SLPIP03973 132 aa3.4□□□□□ -1.86
USP44-201ENST00000258499 Q8N2B8 174 aa3.4□□□□□ -1.86
USP44-201ENST00000258499 C14orf132Q9NPU4 83 aa3.4□□□□□ -1.86
USP44-201ENST00000258499 CDC42SE2Q9NRR3 84 aa3.4□□□□□ -1.86
USP44-201ENST00000258499 NBEAL2Q6ZNJ1 2754 aa3.4□□□□□ -1.87
USP44-201ENST00000258499 CMC4P56277 68 aaPredicted RBP3.4□□□□□ -1.87
USP44-201ENST00000258499 LITAFQ99732 161 aa3.4□□□□□ -1.87
USP44-201ENST00000258499 HECTD1Q9ULT8 2610 aa3.39□□□□□ -1.87
USP44-201ENST00000258499 TRAV25A0A0B4J276 109 aa3.39□□□□□ -1.87
USP44-201ENST00000258499 TIMM17BO60830 172 aa3.39□□□□□ -1.87
USP44-201ENST00000258499 NTM-AS1Q6ZSK4 140 aa3.39□□□□□ -1.87
USP44-201ENST00000258499 SBSPONQ8IVN8 264 aa3.39□□□□□ -1.87
USP44-201ENST00000258499 IGLV4-60A0A075B6I1 120 aa3.39□□□□□ -1.87
USP44-201ENST00000258499 F5H768 121 aa3.39□□□□□ -1.87
USP44-201ENST00000258499 FBN2P35556 2912 aa3.39□□□□□ -1.87
USP44-201ENST00000258499 BEAN1Q3B7T3 259 aa3.39□□□□□ -1.87
USP44-201ENST00000258499 SOSTDC1Q6X4U4 206 aa3.39□□□□□ -1.87
USP44-201ENST00000258499 LAMTOR3Q9UHA4 124 aa3.39□□□□□ -1.87
USP44-201ENST00000258499 NF1P21359 2839 aa3.39□□□□□ -1.87
USP44-201ENST00000258499 TRBV6-8A0A0A6YYG3 113 aa3.38□□□□□ -1.87
USP44-201ENST00000258499 ACYP1P07311 99 aa3.38□□□□□ -1.87
USP44-201ENST00000258499 OVOL2Q9BRP0 275 aa3.38□□□□□ -1.87
USP44-201ENST00000258499 GCN1Q92616 2671 aaKnown RBP3.38□□□□□ -1.87
USP44-201ENST00000258499 SDIM1Q6ZPB5 146 aa3.38□□□□□ -1.87
USP44-201ENST00000258499 LINC01006Q8NI28 216 aa3.38□□□□□ -1.87
USP44-201ENST00000258499 NCR3O14931 201 aa3.38□□□□□ -1.87
USP44-201ENST00000258499 DEFB135Q30KP9 77 aa3.38□□□□□ -1.87
USP44-201ENST00000258499 SMIM11BQ8TCY0 68 aa3.38□□□□□ -1.87
USP44-201ENST00000258499 BBC3Q96PG8 261 aaPredicted RBP3.38□□□□□ -1.87
USP44-201ENST00000258499 CCL18P55774 89 aa3.37□□□□□ -1.87
USP44-201ENST00000258499 DAD1P61803 113 aa3.37□□□□□ -1.87
USP44-201ENST00000258499 LINC00643Q86TS7 51 aa3.37□□□□□ -1.87
USP44-201ENST00000258499 LINC00482Q8N8I6 264 aa3.37□□□□□ -1.87
USP44-201ENST00000258499 LINC00526Q96FQ7 95 aa3.37□□□□□ -1.87
USP44-201ENST00000258499 BSNQ9UPA5 3926 aa3.37□□□□□ -1.87
USP44-201ENST00000258499 CELSR2Q9HCU4 2923 aa3.37□□□□□ -1.87
USP44-201ENST00000258499 TRACP01848 142 aa3.37□□□□□ -1.87
USP44-201ENST00000258499 LINC00269Q8N2A0 174 aa3.37□□□□□ -1.87
USP44-201ENST00000258499 CITED1Q99966 193 aa3.37□□□□□ -1.87
USP44-201ENST00000258499 ORMDL1Q9P0S3 153 aa3.37□□□□□ -1.87
USP44-201ENST00000258499 TRBV6-4A0A1B0GX49 114 aa3.37□□□□□ -1.87
USP44-201ENST00000258499 H0YGX0 51 aa3.37□□□□□ -1.87
USP44-201ENST00000258499 PRR3P79522 188 aaKnown RBP3.37□□□□□ -1.87
USP44-201ENST00000258499 XP32Q5T750 250 aa3.37□□□□□ -1.87
USP44-201ENST00000258499 LINC00337Q8N6G1 96 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms