RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 S100A7L2Q5SY68 101 aa14.66□□□□□ -0.06
RARA-201ENST00000254066 C14orf132Q9NPU4 83 aa14.66□□□□□ -0.06
RARA-201ENST00000254066 CDSNQ15517 529 aa14.66□□□□□ -0.06
RARA-201ENST00000254066 A6NDX4 124 aa14.65□□□□□ -0.06
RARA-201ENST00000254066 ATP5EP2Q5VTU8 51 aa14.65□□□□□ -0.06
RARA-201ENST00000254066 NOTCH2Q04721 2471 aa14.65□□□□□ -0.06
RARA-201ENST00000254066 Q9UF83 564 aa14.65□□□□□ -0.06
RARA-201ENST00000254066 C19orf84I3L1E1 186 aa14.64□□□□□ -0.07
RARA-201ENST00000254066 RBMY1A1P0DJD3 496 aaKnown RBP14.64□□□□□ -0.07
RARA-201ENST00000254066 RBMY1CP0DJD4 496 aa14.64□□□□□ -0.07
RARA-201ENST00000254066 RBMY1FQ15415 496 aaKnown RBP14.64□□□□□ -0.07
RARA-201ENST00000254066 A8MTW9 85 aa14.64□□□□□ -0.07
RARA-201ENST00000254066 ZNF561-AS1K7EIQ3 104 aa14.64□□□□□ -0.07
RARA-201ENST00000254066 KNCNA6PVL3 124 aa14.62□□□□□ -0.07
RARA-201ENST00000254066 EPM2AB3EWF7 344 aa14.62□□□□□ -0.07
RARA-201ENST00000254066 HOXD3P31249 432 aaPredicted RBP14.62□□□□□ -0.07
RARA-201ENST00000254066 LINC00337Q8N6G1 96 aa14.62□□□□□ -0.07
RARA-201ENST00000254066 TEX15Q9BXT5 2789 aa14.62□□□□□ -0.07
RARA-201ENST00000254066 NACAE9PAV3 2078 aa14.61□□□□□ -0.07
RARA-201ENST00000254066 A0A087WVE0 104 aa14.61□□□□□ -0.07
RARA-201ENST00000254066 A0A087WYN8 130 aa14.61□□□□□ -0.07
RARA-201ENST00000254066 IGHV3-38A0A0C4DH36 116 aa14.61□□□□□ -0.07
RARA-201ENST00000254066 ITPR2Q14571 2701 aa14.61□□□□□ -0.07
RARA-201ENST00000254066 SMIM11BQ8TCY0 68 aa14.61□□□□□ -0.07
RARA-201ENST00000254066 C10orf105Q8TEF2 133 aa14.61□□□□□ -0.07
RARA-201ENST00000254066 BPESC1Q9GZL8 116 aa14.61□□□□□ -0.07
RARA-201ENST00000254066 CELSR2Q9HCU4 2923 aa14.6□□□□□ -0.07
RARA-201ENST00000254066 C9orf129Q5T035 196 aaKnown RBP14.6□□□□□ -0.07
RARA-201ENST00000254066 MED13LQ71F56 2210 aa14.6□□□□□ -0.07
RARA-201ENST00000254066 IGKV2-28A0A075B6P5 120 aa14.6□□□□□ -0.07
RARA-201ENST00000254066 IGKV2D-28P01615 120 aa14.6□□□□□ -0.07
RARA-201ENST00000254066 SND1-IT1Q9HBX3 110 aa14.6□□□□□ -0.07
RARA-201ENST00000254066 CCKP06307 115 aa14.58□□□□□ -0.07
RARA-201ENST00000254066 BLCAPP62952 87 aa14.58□□□□□ -0.07
RARA-201ENST00000254066 LY6EQ16553 131 aa14.58□□□□□ -0.07
RARA-201ENST00000254066 FAM19A1Q7Z5A9 133 aa14.58□□□□□ -0.07
RARA-201ENST00000254066 TMEM89A2RUT3 159 aa14.58□□□□□ -0.08
RARA-201ENST00000254066 CRYBG3Q68DQ2 2970 aa14.58□□□□□ -0.08
RARA-201ENST00000254066 CENPEQ02224 2701 aa14.58□□□□□ -0.08
RARA-201ENST00000254066 TRBV10-3A0A0K0K1G6 114 aa14.57□□□□□ -0.08
RARA-201ENST00000254066 H3BUX3 64 aa14.57□□□□□ -0.08
RARA-201ENST00000254066 HTN1P15515 57 aa14.57□□□□□ -0.08
RARA-201ENST00000254066 IL17DQ8TAD2 202 aa14.57□□□□□ -0.08
RARA-201ENST00000254066 FHL2Q14192 279 aa14.56□□□□□ -0.08
RARA-201ENST00000254066 BRD3OSQ6XYD6 125 aa14.56□□□□□ -0.08
RARA-201ENST00000254066 BCE1O60756 84 aa14.56□□□□□ -0.08
RARA-201ENST00000254066 ANKHD1Q8IWZ3 2542 aaKnown RBP14.56□□□□□ -0.08
RARA-201ENST00000254066 CREBBPQ92793 2442 aa14.55□□□□□ -0.08
RARA-201ENST00000254066 LYPD5Q6UWN5 251 aa14.55□□□□□ -0.08
RARA-201ENST00000254066 MIR7-3HGQ8N6C7 128 aa14.55□□□□□ -0.08
RARA-201ENST00000254066 CDC42SE2Q9NRR3 84 aa14.54□□□□□ -0.08
RARA-201ENST00000254066 SERP1Q9Y6X1 66 aa14.54□□□□□ -0.08
RARA-201ENST00000254066 C11orf72Q8NBR9 251 aa14.54□□□□□ -0.08
RARA-201ENST00000254066 JMJD7-PLA2G4BH0Y9G9 81 aa14.53□□□□□ -0.08
RARA-201ENST00000254066 ORMDL1Q9P0S3 153 aa14.53□□□□□ -0.08
RARA-201ENST00000254066 MYO9AB2RTY4 2548 aa14.53□□□□□ -0.08
RARA-201ENST00000254066 LECT2O14960 151 aa14.53□□□□□ -0.08
RARA-201ENST00000254066 GHRHP01286 108 aa14.53□□□□□ -0.08
RARA-201ENST00000254066 DCHS2Q6V1P9 2916 aa14.52□□□□□ -0.08
RARA-201ENST00000254066 RBMY1BA6NDE4 496 aaKnown RBP14.52□□□□□ -0.09
RARA-201ENST00000254066 RBMY1EA6NEQ0 496 aaKnown RBP14.52□□□□□ -0.09
RARA-201ENST00000254066 NCR3O14931 201 aa14.52□□□□□ -0.09
RARA-201ENST00000254066 RBMY1DP0C7P1 496 aaKnown RBP14.52□□□□□ -0.09
RARA-201ENST00000254066 C16orf95Q9H693 158 aa14.52□□□□□ -0.09
RARA-201ENST00000254066 ABCA12Q86UK0 2595 aa14.52□□□□□ -0.09
RARA-201ENST00000254066 APCP25054 2843 aa14.52□□□□□ -0.09
RARA-201ENST00000254066 COX7B2Q8TF08 81 aa14.51□□□□□ -0.09
RARA-201ENST00000254066 TRBV10-1A0A0K0K1A3 114 aa14.51□□□□□ -0.09
RARA-201ENST00000254066 LINC00167Q96N53 147 aa14.5□□□□□ -0.09
RARA-201ENST00000254066 A0A1W2PPR1 153 aa14.5□□□□□ -0.09
RARA-201ENST00000254066 Q96MF0 132 aa14.5□□□□□ -0.09
RARA-201ENST00000254066 AVPP01185 164 aa14.49□□□□□ -0.09
RARA-201ENST00000254066 TMEM243Q9BU79 118 aa14.49□□□□□ -0.09
RARA-201ENST00000254066 A0A0U1RQV1 116 aa14.49□□□□□ -0.09
RARA-201ENST00000254066 KRTAP10-9P60411 292 aa14.49□□□□□ -0.09
RARA-201ENST00000254066 RPL36AP83881 106 aaKnown RBP14.49□□□□□ -0.09
RARA-201ENST00000254066 RPL36ALQ969Q0 106 aaKnown RBP14.49□□□□□ -0.09
RARA-201ENST00000254066 SMIM26A0A096LP01 95 aa14.48□□□□□ -0.09
RARA-201ENST00000254066 IBA57-AS1B1ANH7 110 aa14.48□□□□□ -0.09
RARA-201ENST00000254066 CCL18P55774 89 aa14.48□□□□□ -0.09
RARA-201ENST00000254066 LY6G6DO95868 133 aa14.47□□□□□ -0.09
RARA-201ENST00000254066 SS18Q15532 418 aa14.47□□□□□ -0.09
RARA-201ENST00000254066 WFDC11Q8NEX6 87 aa14.47□□□□□ -0.09
RARA-201ENST00000254066 IGHV4-38-2P0DP08 117 aa14.46□□□□□ -0.09
RARA-201ENST00000254066 FBN2P35556 2912 aa14.46□□□□□ -0.09
RARA-201ENST00000254066 LRBAP50851 2863 aa14.46□□□□□ -0.09
RARA-201ENST00000254066 LINC00158P58513 81 aa14.46□□□□□ -0.09
RARA-201ENST00000254066 DEFB131AP59861 70 aa14.46□□□□□ -0.09
RARA-201ENST00000254066 BRK1Q8WUW1 75 aa14.46□□□□□ -0.09
RARA-201ENST00000254066 NTM-AS1Q6ZSK4 140 aa14.45□□□□□ -0.1
RARA-201ENST00000254066 RETNQ9HD89 108 aa14.45□□□□□ -0.1
RARA-201ENST00000254066 XCL1P47992 114 aa14.45□□□□□ -0.1
RARA-201ENST00000254066 XCL2Q9UBD3 114 aa14.45□□□□□ -0.1
RARA-201ENST00000254066 PDZD2O15018 2839 aa14.44□□□□□ -0.1
RARA-201ENST00000254066 PRM2P04554 102 aa14.44□□□□□ -0.1
RARA-201ENST00000254066 HILS1P60008 231 aa14.43□□□□□ -0.1
RARA-201ENST00000254066 PMAIP1Q13794 54 aa14.43□□□□□ -0.1
RARA-201ENST00000254066 CD164Q04900 197 aa14.43□□□□□ -0.1
RARA-201ENST00000254066 TRBV6-4A0A1B0GX49 114 aa14.42□□□□□ -0.1
RARA-201ENST00000254066 K7EQD1 137 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms