RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 IFI27L1Q96BM0 104 aa15.02■□□□□ -0
APOE-201ENST00000252486 PGPEP1Q9NXJ5 209 aa15.02■□□□□ -0
APOE-201ENST00000252486 FAT2Q9NYQ8 4349 aa15.01□□□□□ -0.01
APOE-201ENST00000252486 HSPB8Q9UJY1 196 aa15.01□□□□□ -0.01
APOE-201ENST00000252486 IGHV3OR16-9A0A0B4J2B5 98 aa15□□□□□ -0.01
APOE-201ENST00000252486 IGHV1-58A0A0C4DH39 117 aa15□□□□□ -0.01
APOE-201ENST00000252486 MALP21145 153 aa15□□□□□ -0.01
APOE-201ENST00000252486 NDUFA6P56556 154 aa15□□□□□ -0.01
APOE-201ENST00000252486 PRSS1P07477 247 aa14.99□□□□□ -0.01
APOE-201ENST00000252486 HERVK_113P63121 156 aa14.99□□□□□ -0.01
APOE-201ENST00000252486 CDPF1Q6NVV7 123 aa14.99□□□□□ -0.01
APOE-201ENST00000252486 SPATA12Q7Z6I5 190 aa14.99□□□□□ -0.01
APOE-201ENST00000252486 PACRGQ96M98 296 aaPredicted RBP14.99□□□□□ -0.01
APOE-201ENST00000252486 GEMIN7Q9H840 131 aaKnown RBP14.99□□□□□ -0.01
APOE-201ENST00000252486 APOMO95445 188 aa14.98□□□□□ -0.01
APOE-201ENST00000252486 C5orf38Q86SI9 138 aa14.98□□□□□ -0.01
APOE-201ENST00000252486 TINCRA0A1B0GVN0 87 aa14.97□□□□□ -0.01
APOE-201ENST00000252486 LINC01561Q8N1V8 128 aa14.97□□□□□ -0.01
APOE-201ENST00000252486 TRAV12-1A0A0B4J245 112 aa14.96□□□□□ -0.01
APOE-201ENST00000252486 A0A0J9YXV3 536 aa14.96□□□□□ -0.01
APOE-201ENST00000252486 COX6A2Q02221 97 aa14.96□□□□□ -0.01
APOE-201ENST00000252486 C15orf56Q8N910 161 aa14.96□□□□□ -0.01
APOE-201ENST00000252486 A0A087WZ39 114 aa14.95□□□□□ -0.02
APOE-201ENST00000252486 GVQW2A0A096LPI5 108 aaPredicted RBP14.95□□□□□ -0.02
APOE-201ENST00000252486 hDV102S1A0JD36 115 aa14.95□□□□□ -0.02
APOE-201ENST00000252486 FABP4P15090 132 aa14.94□□□□□ -0.02
APOE-201ENST00000252486 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.93□□□□□ -0.02
APOE-201ENST00000252486 KRTAP10-2P60368 255 aa14.93□□□□□ -0.02
APOE-201ENST00000252486 IGLV5-52A0A0A0MRZ9 124 aa14.92□□□□□ -0.02
APOE-201ENST00000252486 IGLC3P0DOY3 106 aa14.92□□□□□ -0.02
APOE-201ENST00000252486 OR10D4PQ8NGN7 298 aa14.92□□□□□ -0.02
APOE-201ENST00000252486 IGHV3-64A0A075B6Q5 118 aa14.91□□□□□ -0.02
APOE-201ENST00000252486 IGLV5-45A0A087WSX0 123 aa14.91□□□□□ -0.02
APOE-201ENST00000252486 CHTOPQ9Y3Y2 248 aaKnown RBP14.91□□□□□ -0.02
APOE-201ENST00000252486 ZNF561-AS1K7EIQ3 104 aa14.9□□□□□ -0.02
APOE-201ENST00000252486 S100A6P06703 90 aa14.9□□□□□ -0.02
APOE-201ENST00000252486 HIGD2BQ4VC39 106 aa14.9□□□□□ -0.02
APOE-201ENST00000252486 LINC00469Q8N7U9 141 aa14.9□□□□□ -0.02
APOE-201ENST00000252486 MAP1LC3CQ9BXW4 147 aa14.9□□□□□ -0.02
APOE-201ENST00000252486 PKD1P98161 4303 aa14.9□□□□□ -0.02
APOE-201ENST00000252486 CHAC1Q9BUX1 264 aa14.89□□□□□ -0.03
APOE-201ENST00000252486 CDKN2A-AS1Q9UH64 79 aa14.89□□□□□ -0.03
APOE-201ENST00000252486 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.88□□□□□ -0.03
APOE-201ENST00000252486 C16orf90A8MZG2 172 aa14.88□□□□□ -0.03
APOE-201ENST00000252486 H3BRM9 83 aa14.88□□□□□ -0.03
APOE-201ENST00000252486 CNBPP62633 177 aaKnown RBP14.88□□□□□ -0.03
APOE-201ENST00000252486 ORAOV1Q8WV07 137 aa14.88□□□□□ -0.03
APOE-201ENST00000252486 IGLV4-69A0A075B6H9 119 aa14.87□□□□□ -0.03
APOE-201ENST00000252486 F8VRH5 84 aa14.87□□□□□ -0.03
APOE-201ENST00000252486 SPAG11BQ08648 103 aa14.87□□□□□ -0.03
APOE-201ENST00000252486 F8WDY8 70 aa14.86□□□□□ -0.03
APOE-201ENST00000252486 DNAH11Q96DT5 4516 aa14.85□□□□□ -0.03
APOE-201ENST00000252486 HECTD4Q9Y4D8 3996 aa14.85□□□□□ -0.03
APOE-201ENST00000252486 H0Y8G0 127 aa14.85□□□□□ -0.03
APOE-201ENST00000252486 GCSHP23434 173 aa14.85□□□□□ -0.03
APOE-201ENST00000252486 C2orf48Q96LS8 159 aa14.85□□□□□ -0.03
APOE-201ENST00000252486 MRPL35Q9NZE8 188 aaKnown RBP14.85□□□□□ -0.03
APOE-201ENST00000252486 ODF1Q14990 250 aa14.84□□□□□ -0.03
APOE-201ENST00000252486 C11orf86A6NJI1 115 aa14.83□□□□□ -0.04
APOE-201ENST00000252486 ZNF22P17026 224 aaPredicted RBP14.83□□□□□ -0.04
APOE-201ENST00000252486 FUSP35637 526 aaKnown RBP eCLIP14.83□□□□□ -0.04
APOE-201ENST00000252486 SMIM1B2RUZ4 78 aa14.82□□□□□ -0.04
APOE-201ENST00000252486 S100A2P29034 98 aa14.82□□□□□ -0.04
APOE-201ENST00000252486 C9orf163Q8N9P6 203 aa14.82□□□□□ -0.04
APOE-201ENST00000252486 SYS1-DBNDD2H3BUS1 97 aa14.81□□□□□ -0.04
APOE-201ENST00000252486 PRSS2P07478 247 aa14.81□□□□□ -0.04
APOE-201ENST00000252486 SYCNQ0VAF6 134 aa14.81□□□□□ -0.04
APOE-201ENST00000252486 TMEM170BQ5T4T1 132 aa14.81□□□□□ -0.04
APOE-201ENST00000252486 SLPIP03973 132 aa14.8□□□□□ -0.04
APOE-201ENST00000252486 PLNP26678 52 aa14.8□□□□□ -0.04
APOE-201ENST00000252486 Q8IZM0 81 aa14.8□□□□□ -0.04
APOE-201ENST00000252486 HIST3H2BBQ8N257 126 aa14.8□□□□□ -0.04
APOE-201ENST00000252486 LINC00526Q96FQ7 95 aa14.8□□□□□ -0.04
APOE-201ENST00000252486 CAMK2N2Q96S95 79 aa14.8□□□□□ -0.04
APOE-201ENST00000252486 PET117Q6UWS5 81 aa14.79□□□□□ -0.04
APOE-201ENST00000252486 CARD19Q96LW7 228 aa14.79□□□□□ -0.04
APOE-201ENST00000252486 DPM2O94777 84 aa14.78□□□□□ -0.04
APOE-201ENST00000252486 SPINK8P0C7L1 97 aa14.78□□□□□ -0.04
APOE-201ENST00000252486 KIAA0087Q14695 138 aa14.78□□□□□ -0.04
APOE-201ENST00000252486 TOMM7Q9P0U1 55 aa14.78□□□□□ -0.04
APOE-201ENST00000252486 PKIGQ9Y2B9 76 aa14.78□□□□□ -0.04
APOE-201ENST00000252486 NDUFA1O15239 70 aa14.77□□□□□ -0.05
APOE-201ENST00000252486 C6orf226Q5I0X4 101 aa14.77□□□□□ -0.05
APOE-201ENST00000252486 C3orf79P0CE67 100 aa14.76□□□□□ -0.05
APOE-201ENST00000252486 CXCL5P42830 114 aa14.75□□□□□ -0.05
APOE-201ENST00000252486 KRTDAPP60985 99 aa14.75□□□□□ -0.05
APOE-201ENST00000252486 SNRPEP62304 92 aaKnown RBP14.75□□□□□ -0.05
APOE-201ENST00000252486 RNF151Q2KHN1 245 aa14.75□□□□□ -0.05
APOE-201ENST00000252486 COX7B2Q8TF08 81 aa14.75□□□□□ -0.05
APOE-201ENST00000252486 IGLV5-39A0A0G2JS06 123 aa14.74□□□□□ -0.05
APOE-201ENST00000252486 C5orf52A6NGY3 159 aa14.74□□□□□ -0.05
APOE-201ENST00000252486 IGKCP01834 107 aa14.74□□□□□ -0.05
APOE-201ENST00000252486 KRTAP10-1P60331 282 aa14.74□□□□□ -0.05
APOE-201ENST00000252486 CKS1BP61024 79 aa14.74□□□□□ -0.05
APOE-201ENST00000252486 Q6ZRU5 148 aa14.74□□□□□ -0.05
APOE-201ENST00000252486 HIST1H2BLQ99880 126 aa14.74□□□□□ -0.05
APOE-201ENST00000252486 EPPK1P58107 5090 aaKnown RBP14.73□□□□□ -0.05
APOE-201ENST00000252486 TMEM223A0PJW6 202 aa14.73□□□□□ -0.05
APOE-201ENST00000252486 LINC01545Q5VT33 79 aa14.73□□□□□ -0.05
APOE-201ENST00000252486 C20orf202A1L168 122 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms