RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 GEMIN7Q9H840 131 aaKnown RBP8.76□□□□□ -1.01
LSM8-201ENST00000249299 TRAV13-1A0A0B4J241 112 aa8.75□□□□□ -1.01
LSM8-201ENST00000249299 C11orf86A6NJI1 115 aa8.75□□□□□ -1.01
LSM8-201ENST00000249299 IGHV3-30P01768 117 aa8.75□□□□□ -1.01
LSM8-201ENST00000249299 IGHV3-33P01772 117 aa8.75□□□□□ -1.01
LSM8-201ENST00000249299 CRPP02741 224 aa8.75□□□□□ -1.01
LSM8-201ENST00000249299 IGHV3-30-3P0DP02 117 aa8.75□□□□□ -1.01
LSM8-201ENST00000249299 IGHV3-30-5P0DP03 117 aa8.75□□□□□ -1.01
LSM8-201ENST00000249299 RNASE13Q5GAN3 156 aaKnown RBP8.75□□□□□ -1.01
LSM8-201ENST00000249299 A0A0J9YXV3 536 aa8.74□□□□□ -1.01
LSM8-201ENST00000249299 HSBP1L1C9JCN9 74 aa8.74□□□□□ -1.01
LSM8-201ENST00000249299 ZC2HC1BQ5TFG8 222 aa8.74□□□□□ -1.01
LSM8-201ENST00000249299 CD164L2Q6UWJ8 174 aa8.74□□□□□ -1.01
LSM8-201ENST00000249299 ENHOQ6UWT2 76 aa8.74□□□□□ -1.01
LSM8-201ENST00000249299 CHAC1Q9BUX1 264 aa8.74□□□□□ -1.01
LSM8-201ENST00000249299 IGHV3OR16-9A0A0B4J2B5 98 aa8.73□□□□□ -1.01
LSM8-201ENST00000249299 H3BRM9 83 aa8.73□□□□□ -1.01
LSM8-201ENST00000249299 LCE3BQ5TA77 95 aa8.73□□□□□ -1.01
LSM8-201ENST00000249299 RMI2Q96E14 147 aa8.73□□□□□ -1.01
LSM8-201ENST00000249299 COX11Q9Y6N1 276 aa8.73□□□□□ -1.01
LSM8-201ENST00000249299 TENM2Q9NT68 2774 aa8.72□□□□□ -1.01
LSM8-201ENST00000249299 HERVK_113P61574 105 aa8.72□□□□□ -1.01
LSM8-201ENST00000249299 S100A12P80511 92 aa8.72□□□□□ -1.01
LSM8-201ENST00000249299 PLECQ15149 4684 aaKnown RBP8.72□□□□□ -1.01
LSM8-201ENST00000249299 UBE2WQ96B02 151 aa8.72□□□□□ -1.01
LSM8-201ENST00000249299 KRTAP4-12Q9BQ66 201 aa8.72□□□□□ -1.01
LSM8-201ENST00000249299 PMCHL2Q9BQD1 86 aa8.72□□□□□ -1.01
LSM8-201ENST00000249299 STARD9Q9P2P6 4700 aa8.71□□□□□ -1.01
LSM8-201ENST00000249299 A0A087WZ39 114 aa8.71□□□□□ -1.02
LSM8-201ENST00000249299 ZNF22P17026 224 aaPredicted RBP8.71□□□□□ -1.02
LSM8-201ENST00000249299 TMEM170BQ5T4T1 132 aa8.7□□□□□ -1.02
LSM8-201ENST00000249299 LINC00469Q8N7U9 141 aa8.7□□□□□ -1.02
LSM8-201ENST00000249299 CHCHD10Q8WYQ3 142 aaPredicted RBP8.7□□□□□ -1.02
LSM8-201ENST00000249299 VAMP8Q9BV40 100 aa8.7□□□□□ -1.02
LSM8-201ENST00000249299 C1orf43Q9BWL3 253 aa8.7□□□□□ -1.02
LSM8-201ENST00000249299 IGKV3OR2-268A0A0C4DH90 116 aa8.69□□□□□ -1.02
LSM8-201ENST00000249299 NBDYA0A0U1RRE5 68 aa8.69□□□□□ -1.02
LSM8-201ENST00000249299 TMEM223A0PJW6 202 aa8.69□□□□□ -1.02
LSM8-201ENST00000249299 E9PLD3 99 aa8.69□□□□□ -1.02
LSM8-201ENST00000249299 COX6A2Q02221 97 aa8.69□□□□□ -1.02
LSM8-201ENST00000249299 LINC00518Q8N0U6 118 aa8.69□□□□□ -1.02
LSM8-201ENST00000249299 CDKN2A-AS1Q9UH64 79 aa8.69□□□□□ -1.02
LSM8-201ENST00000249299 XCL1P47992 114 aa8.68□□□□□ -1.02
LSM8-201ENST00000249299 CLPSL2Q6UWE3 100 aa8.68□□□□□ -1.02
LSM8-201ENST00000249299 LINC00476Q8WZB0 136 aa8.68□□□□□ -1.02
LSM8-201ENST00000249299 TM2D2Q9BX73 214 aa8.68□□□□□ -1.02
LSM8-201ENST00000249299 IGLV5-39A0A0G2JS06 123 aa8.67□□□□□ -1.02
LSM8-201ENST00000249299 COX7A2LO14548 114 aa8.67□□□□□ -1.02
LSM8-201ENST00000249299 FOXI1Q12951 378 aa8.67□□□□□ -1.02
LSM8-201ENST00000249299 KRTAP26-1Q6PEX3 210 aa8.67□□□□□ -1.02
LSM8-201ENST00000249299 ATOH7Q8N100 152 aa8.67□□□□□ -1.02
LSM8-201ENST00000249299 C12orf57Q99622 126 aa8.67□□□□□ -1.02
LSM8-201ENST00000249299 IGHV1-58A0A0C4DH39 117 aa8.66□□□□□ -1.02
LSM8-201ENST00000249299 APOMO95445 188 aa8.66□□□□□ -1.02
LSM8-201ENST00000249299 SFTA2Q6UW10 78 aa8.66□□□□□ -1.02
LSM8-201ENST00000249299 STPG4Q8N801 248 aa8.66□□□□□ -1.02
LSM8-201ENST00000249299 PLEKHB2Q96CS7 222 aa8.66□□□□□ -1.02
LSM8-201ENST00000249299 LEPROTO15243 131 aa8.65□□□□□ -1.02
LSM8-201ENST00000249299 IGLV10-54A0A075B6I4 117 aa8.64□□□□□ -1.03
LSM8-201ENST00000249299 IGKV2D-24A0A075B6R9 120 aa8.64□□□□□ -1.03
LSM8-201ENST00000249299 hDV102S1A0JD36 115 aa8.64□□□□□ -1.03
LSM8-201ENST00000249299 GAGE12HA6NDE8 117 aa8.64□□□□□ -1.03
LSM8-201ENST00000249299 SMIM1B2RUZ4 78 aa8.64□□□□□ -1.03
LSM8-201ENST00000249299 H3BS24 57 aa8.64□□□□□ -1.03
LSM8-201ENST00000249299 SPATA45Q537H7 98 aa8.64□□□□□ -1.03
LSM8-201ENST00000249299 CFAP161Q6P656 301 aa8.64□□□□□ -1.03
LSM8-201ENST00000249299 Q6ZR54 194 aa8.64□□□□□ -1.03
LSM8-201ENST00000249299 PAM16Q9Y3D7 125 aa8.64□□□□□ -1.03
LSM8-201ENST00000249299 IGHV3-64A0A075B6Q5 118 aa8.63□□□□□ -1.03
LSM8-201ENST00000249299 MALP21145 153 aa8.63□□□□□ -1.03
LSM8-201ENST00000249299 NMUP48645 174 aa8.63□□□□□ -1.03
LSM8-201ENST00000249299 C5orf38Q86SI9 138 aa8.63□□□□□ -1.03
LSM8-201ENST00000249299 KRTAP1-5Q9BYS1 174 aa8.63□□□□□ -1.03
LSM8-201ENST00000249299 VPS13DQ5THJ4 4388 aa8.63□□□□□ -1.03
LSM8-201ENST00000249299 F8WDY8 70 aa8.62□□□□□ -1.03
LSM8-201ENST00000249299 DLEU1O43261 78 aa8.62□□□□□ -1.03
LSM8-201ENST00000249299 LY6G6CO95867 125 aa8.62□□□□□ -1.03
LSM8-201ENST00000249299 MAJINQ3KP22 176 aa8.62□□□□□ -1.03
LSM8-201ENST00000249299 ANKRD39Q53RE8 183 aa8.62□□□□□ -1.03
LSM8-201ENST00000249299 Q8IZM0 81 aa8.62□□□□□ -1.03
LSM8-201ENST00000249299 KRTAP9-9Q9BYP9 154 aa8.62□□□□□ -1.03
LSM8-201ENST00000249299 KRTAP9-4Q9BYQ2 154 aa8.62□□□□□ -1.03
LSM8-201ENST00000249299 J3QQQ9 107 aa8.61□□□□□ -1.03
LSM8-201ENST00000249299 SPINK8P0C7L1 97 aa8.61□□□□□ -1.03
LSM8-201ENST00000249299 COX8AP10176 69 aa8.61□□□□□ -1.03
LSM8-201ENST00000249299 CXCL5P42830 114 aa8.61□□□□□ -1.03
LSM8-201ENST00000249299 Q9HAA7 133 aa8.61□□□□□ -1.03
LSM8-201ENST00000249299 DNAH1Q9P2D7 4330 aa8.6□□□□□ -1.03
LSM8-201ENST00000249299 IGKV2D-26A0A0A0MRZ7 120 aa8.59□□□□□ -1.03
LSM8-201ENST00000249299 LGALS3P17931 250 aaKnown RBP8.59□□□□□ -1.03
LSM8-201ENST00000249299 COX7B2Q8TF08 81 aa8.59□□□□□ -1.03
LSM8-201ENST00000249299 LYSTQ99698 3801 aa8.58□□□□□ -1.04
LSM8-201ENST00000249299 TSTD3H0UI37 97 aa8.58□□□□□ -1.04
LSM8-201ENST00000249299 PRSS2P07478 247 aa8.58□□□□□ -1.04
LSM8-201ENST00000249299 HERV-K104P63124 156 aa8.58□□□□□ -1.04
LSM8-201ENST00000249299 SLC25A34Q6PIV7 304 aa8.58□□□□□ -1.04
LSM8-201ENST00000249299 BOD1L2Q8IYS8 172 aa8.58□□□□□ -1.04
LSM8-201ENST00000249299 GVQW2A0A096LPI5 108 aaPredicted RBP8.57□□□□□ -1.04
LSM8-201ENST00000249299 MYMXA0A1B0GTQ4 84 aa8.57□□□□□ -1.04
LSM8-201ENST00000249299 LINC00587B1AMM8 73 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms