RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 TGIF2-C20orf24A0A0A6YYL0 155 aa15.61■□□□□ 0.09
SDF2L1-201ENST00000248958 LINC01549A6NIU2 74 aa15.61■□□□□ 0.09
SDF2L1-201ENST00000248958 PAPPA-AS1Q5QFB9 102 aa15.61■□□□□ 0.09
SDF2L1-201ENST00000248958 C5orf38Q86SI9 138 aa15.61■□□□□ 0.09
SDF2L1-201ENST00000248958 TRAPPC1Q9Y5R8 145 aa15.61■□□□□ 0.09
SDF2L1-201ENST00000248958 IGHV3OR16-9A0A0B4J2B5 98 aa15.6■□□□□ 0.09
SDF2L1-201ENST00000248958 PLA2G1BP04054 148 aaKnown RBP15.6■□□□□ 0.09
SDF2L1-201ENST00000248958 CIRBPQ14011 172 aaKnown RBP15.6■□□□□ 0.09
SDF2L1-201ENST00000248958 LINC00528Q8N1L1 170 aa15.6■□□□□ 0.09
SDF2L1-201ENST00000248958 LINC01546A6NGU7 62 aa15.59■□□□□ 0.09
SDF2L1-201ENST00000248958 IGIPA6NJ69 53 aa15.59■□□□□ 0.09
SDF2L1-201ENST00000248958 TOMM6Q96B49 74 aa15.59■□□□□ 0.09
SDF2L1-201ENST00000248958 CARD19Q96LW7 228 aa15.59■□□□□ 0.09
SDF2L1-201ENST00000248958 VCX2Q9H322 139 aa15.59■□□□□ 0.09
SDF2L1-201ENST00000248958 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.59■□□□□ 0.09
SDF2L1-201ENST00000248958 SYCNQ0VAF6 134 aa15.58■□□□□ 0.08
SDF2L1-201ENST00000248958 AMELXQ99217 191 aa15.58■□□□□ 0.08
SDF2L1-201ENST00000248958 TIMM17AQ99595 171 aa15.58■□□□□ 0.08
SDF2L1-201ENST00000248958 OR10D4PQ8NGN7 298 aa15.57■□□□□ 0.08
SDF2L1-201ENST00000248958 C2orf48Q96LS8 159 aa15.57■□□□□ 0.08
SDF2L1-201ENST00000248958 IGLV4-69A0A075B6H9 119 aa15.56■□□□□ 0.08
SDF2L1-201ENST00000248958 COX6A2Q02221 97 aa15.56■□□□□ 0.08
SDF2L1-201ENST00000248958 LINC00242Q5T6M2 205 aa15.56■□□□□ 0.08
SDF2L1-201ENST00000248958 FA2HQ7L5A8 372 aa15.56■□□□□ 0.08
SDF2L1-201ENST00000248958 LINC00526Q96FQ7 95 aa15.56■□□□□ 0.08
SDF2L1-201ENST00000248958 SMCO4Q9NRQ5 59 aa15.56■□□□□ 0.08
SDF2L1-201ENST00000248958 INAFM2P0DMQ5 153 aa15.55■□□□□ 0.08
SDF2L1-201ENST00000248958 UBE2D1P51668 147 aa15.55■□□□□ 0.08
SDF2L1-201ENST00000248958 DPH3Q96FX2 82 aa15.55■□□□□ 0.08
SDF2L1-201ENST00000248958 F8WDY8 70 aa15.54■□□□□ 0.08
SDF2L1-201ENST00000248958 PANO1I0J062 215 aa15.54■□□□□ 0.08
SDF2L1-201ENST00000248958 ERASQ7Z444 233 aa15.54■□□□□ 0.08
SDF2L1-201ENST00000248958 SPACA4Q8TDM5 124 aa15.54■□□□□ 0.08
SDF2L1-201ENST00000248958 FAT1Q14517 4588 aa15.54■□□□□ 0.08
SDF2L1-201ENST00000248958 SPAG11BQ08648 103 aa15.53■□□□□ 0.08
SDF2L1-201ENST00000248958 LINC00173Q6ZV60 143 aa15.53■□□□□ 0.08
SDF2L1-201ENST00000248958 CAMK2N2Q96S95 79 aa15.53■□□□□ 0.08
SDF2L1-201ENST00000248958 A0A087WZ39 114 aa15.52■□□□□ 0.08
SDF2L1-201ENST00000248958 SEC11AP67812 179 aa15.52■□□□□ 0.08
SDF2L1-201ENST00000248958 FAM19A3Q7Z5A8 133 aa15.52■□□□□ 0.08
SDF2L1-201ENST00000248958 LINC01561Q8N1V8 128 aa15.52■□□□□ 0.08
SDF2L1-201ENST00000248958 ORAOV1Q8WV07 137 aa15.52■□□□□ 0.08
SDF2L1-201ENST00000248958 SCGB3A1Q96QR1 104 aa15.52■□□□□ 0.08
SDF2L1-201ENST00000248958 LINC00474Q9P2X8 69 aa15.52■□□□□ 0.08
SDF2L1-201ENST00000248958 CHTF8P0CG12 524 aa15.5■□□□□ 0.07
SDF2L1-201ENST00000248958 Q6ZRU5 148 aa15.5■□□□□ 0.07
SDF2L1-201ENST00000248958 YPEL4Q96NS1 127 aa15.5■□□□□ 0.07
SDF2L1-201ENST00000248958 A0A087WYN8 130 aa15.49■□□□□ 0.07
SDF2L1-201ENST00000248958 C18orf32Q8TCD1 76 aa15.49■□□□□ 0.07
SDF2L1-201ENST00000248958 ZC2HC1BQ5TFG8 222 aa15.48■□□□□ 0.07
SDF2L1-201ENST00000248958 SLC7A5P1Q8MH63 180 aa15.48■□□□□ 0.07
SDF2L1-201ENST00000248958 IGKV2-24A0A0C4DH68 120 aa15.47■□□□□ 0.07
SDF2L1-201ENST00000248958 LINC00614P0C842 121 aa15.47■□□□□ 0.07
SDF2L1-201ENST00000248958 RAB5BP61020 215 aa15.47■□□□□ 0.07
SDF2L1-201ENST00000248958 HERVK_113P63121 156 aa15.47■□□□□ 0.07
SDF2L1-201ENST00000248958 RNF151Q2KHN1 245 aa15.47■□□□□ 0.07
SDF2L1-201ENST00000248958 MAJINQ3KP22 176 aa15.47■□□□□ 0.07
SDF2L1-201ENST00000248958 PLAC8Q9NZF1 115 aa15.47■□□□□ 0.07
SDF2L1-201ENST00000248958 A0A096LNI7 61 aa15.46■□□□□ 0.07
SDF2L1-201ENST00000248958 LOC107984640A0A0U1RRK4 108 aa15.46■□□□□ 0.07
SDF2L1-201ENST00000248958 NDUFA1O15239 70 aa15.45■□□□□ 0.06
SDF2L1-201ENST00000248958 MRPL35Q9NZE8 188 aaKnown RBP15.45■□□□□ 0.06
SDF2L1-201ENST00000248958 GEMIN7Q9H840 131 aaKnown RBP15.43■□□□□ 0.06
SDF2L1-201ENST00000248958 RPL37AP61513 92 aaKnown RBP15.42■□□□□ 0.06
SDF2L1-201ENST00000248958 CBLN2Q8IUK8 224 aa15.42■□□□□ 0.06
SDF2L1-201ENST00000248958 STPG4Q8N801 248 aa15.42■□□□□ 0.06
SDF2L1-201ENST00000248958 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.41■□□□□ 0.06
SDF2L1-201ENST00000248958 PTTG1IPP53801 180 aa15.41■□□□□ 0.06
SDF2L1-201ENST00000248958 KIAA0087Q14695 138 aa15.41■□□□□ 0.06
SDF2L1-201ENST00000248958 URB1-AS1Q96HZ7 61 aa15.41■□□□□ 0.06
SDF2L1-201ENST00000248958 HBDP02042 147 aa15.4■□□□□ 0.06
SDF2L1-201ENST00000248958 PMVKQ15126 192 aa15.4■□□□□ 0.06
SDF2L1-201ENST00000248958 VPS13BQ7Z7G8 4022 aa15.4■□□□□ 0.06
SDF2L1-201ENST00000248958 GAGE2BQ13066 116 aa15.39■□□□□ 0.05
SDF2L1-201ENST00000248958 PACRGQ96M98 296 aaPredicted RBP15.39■□□□□ 0.05
SDF2L1-201ENST00000248958 CST9LQ9H4G1 147 aa15.39■□□□□ 0.05
SDF2L1-201ENST00000248958 A0A0J9YXV3 536 aa15.38■□□□□ 0.05
SDF2L1-201ENST00000248958 TINCRA0A1B0GVN0 87 aa15.38■□□□□ 0.05
SDF2L1-201ENST00000248958 PRSS2P07478 247 aa15.38■□□□□ 0.05
SDF2L1-201ENST00000248958 KRTAP10-4P60372 401 aaPredicted RBP15.38■□□□□ 0.05
SDF2L1-201ENST00000248958 C7orf33Q8WU49 177 aa15.38■□□□□ 0.05
SDF2L1-201ENST00000248958 A0A096LNJ9 63 aa15.37■□□□□ 0.05
SDF2L1-201ENST00000248958 CDKN2A-AS1Q9UH64 79 aa15.37■□□□□ 0.05
SDF2L1-201ENST00000248958 TRBV30A0A0K0K1B3 111 aa15.36■□□□□ 0.05
SDF2L1-201ENST00000248958 TLX1NBP0CAT3 122 aa15.36■□□□□ 0.05
SDF2L1-201ENST00000248958 UNQ6190/PRO20217Q6UXQ8 127 aa15.36■□□□□ 0.05
SDF2L1-201ENST00000248958 HERC1Q15751 4861 aa15.35■□□□□ 0.05
SDF2L1-201ENST00000248958 RPL18AQ02543 176 aaKnown RBP15.35■□□□□ 0.05
SDF2L1-201ENST00000248958 C10orf25Q5T742 122 aa15.35■□□□□ 0.05
SDF2L1-201ENST00000248958 Q8IZM0 81 aa15.35■□□□□ 0.05
SDF2L1-201ENST00000248958 CHCHD1Q96BP2 118 aaKnown RBP15.35■□□□□ 0.05
SDF2L1-201ENST00000248958 LINC00469Q8N7U9 141 aa15.34■□□□□ 0.05
SDF2L1-201ENST00000248958 C6orf48Q9UBA6 75 aa15.34■□□□□ 0.05
SDF2L1-201ENST00000248958 IGLV5-45A0A087WSX0 123 aa15.33■□□□□ 0.04
SDF2L1-201ENST00000248958 ATP5LO75964 103 aa15.33■□□□□ 0.04
SDF2L1-201ENST00000248958 C6orf226Q5I0X4 101 aa15.33■□□□□ 0.04
SDF2L1-201ENST00000248958 TOMM7Q9P0U1 55 aa15.33■□□□□ 0.04
SDF2L1-201ENST00000248958 SRRM2Q9UQ35 2752 aaKnown RBP15.33■□□□□ 0.04
SDF2L1-201ENST00000248958 CKS1BP61024 79 aa15.32■□□□□ 0.04
SDF2L1-201ENST00000248958 PDZD11Q5EBL8 140 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms