RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 NOTCH2Q04721 2471 aa18.09■□□□□ 0.49
RAB40C-201ENST00000248139 TRBV10-2A0A0K0K1G8 114 aa18.09■□□□□ 0.49
RAB40C-201ENST00000248139 UBE2L6O14933 153 aa18.09■□□□□ 0.49
RAB40C-201ENST00000248139 CIRBPQ14011 172 aaKnown RBP18.09■□□□□ 0.49
RAB40C-201ENST00000248139 GAGE6Q13070 117 aa18.08■□□□□ 0.49
RAB40C-201ENST00000248139 C2orf82Q6UX34 121 aa18.08■□□□□ 0.49
RAB40C-201ENST00000248139 F5H768 121 aa18.07■□□□□ 0.48
RAB40C-201ENST00000248139 TIMM17BO60830 172 aa18.07■□□□□ 0.48
RAB40C-201ENST00000248139 UNC79Q9P2D8 2635 aa18.06■□□□□ 0.48
RAB40C-201ENST00000248139 TRGV4A0A0C4DH28 118 aa18.06■□□□□ 0.48
RAB40C-201ENST00000248139 COX6CP09669 75 aa18.06■□□□□ 0.48
RAB40C-201ENST00000248139 SMR3AQ99954 134 aa18.06■□□□□ 0.48
RAB40C-201ENST00000248139 TMEM243Q9BU79 118 aa18.06■□□□□ 0.48
RAB40C-201ENST00000248139 CIDEAO60543 219 aa18.06■□□□□ 0.48
RAB40C-201ENST00000248139 IGLV1-51P01701 117 aa18.06■□□□□ 0.48
RAB40C-201ENST00000248139 CKS1BP61024 79 aa18.06■□□□□ 0.48
RAB40C-201ENST00000248139 IFITM1P13164 125 aa18.05■□□□□ 0.48
RAB40C-201ENST00000248139 CSNK1G2-AS1Q8NCQ2 148 aa18.05■□□□□ 0.48
RAB40C-201ENST00000248139 HIVEP2P31629 2446 aa18.04■□□□□ 0.48
RAB40C-201ENST00000248139 C16orf74Q96GX8 76 aa18.04■□□□□ 0.48
RAB40C-201ENST00000248139 CSDC2Q9Y534 153 aaKnown RBP18.04■□□□□ 0.48
RAB40C-201ENST00000248139 TOMM7Q9P0U1 55 aa18.04■□□□□ 0.48
RAB40C-201ENST00000248139 IGLV4-60A0A075B6I1 120 aa18.03■□□□□ 0.48
RAB40C-201ENST00000248139 RNASE1P07998 156 aaKnown RBP18.02■□□□□ 0.47
RAB40C-201ENST00000248139 DEFB130BP0DP73 79 aa18.02■□□□□ 0.47
RAB40C-201ENST00000248139 DEFB130AP0DP74 79 aa18.02■□□□□ 0.47
RAB40C-201ENST00000248139 LST1O00453 97 aa18.01■□□□□ 0.47
RAB40C-201ENST00000248139 UBE2WQ96B02 151 aa18.01■□□□□ 0.47
RAB40C-201ENST00000248139 CRLF1O75462 422 aa18■□□□□ 0.47
RAB40C-201ENST00000248139 M0QXV9 152 aa17.99■□□□□ 0.47
RAB40C-201ENST00000248139 FAM19A3Q7Z5A8 133 aa17.99■□□□□ 0.47
RAB40C-201ENST00000248139 TEX29Q8N6K0 151 aa17.98■□□□□ 0.47
RAB40C-201ENST00000248139 FHL2Q14192 279 aa17.98■□□□□ 0.47
RAB40C-201ENST00000248139 HECTD1Q9ULT8 2610 aa17.97■□□□□ 0.47
RAB40C-201ENST00000248139 A0A1B0GV72 72 aa17.97■□□□□ 0.47
RAB40C-201ENST00000248139 RNF183Q96D59 192 aa17.97■□□□□ 0.47
RAB40C-201ENST00000248139 CHCHD5Q9BSY4 110 aa17.97■□□□□ 0.47
RAB40C-201ENST00000248139 TMEM262E9PQX1 116 aa17.96■□□□□ 0.47
RAB40C-201ENST00000248139 C16orf95Q9H693 158 aa17.96■□□□□ 0.47
RAB40C-201ENST00000248139 TRBV6-4A0A1B0GX49 114 aa17.95■□□□□ 0.46
RAB40C-201ENST00000248139 KRTAP10-3P60369 221 aa17.95■□□□□ 0.46
RAB40C-201ENST00000248139 TRAV8-4A0A0B4J246 113 aa17.94■□□□□ 0.46
RAB40C-201ENST00000248139 C5orf38Q86SI9 138 aa17.94■□□□□ 0.46
RAB40C-201ENST00000248139 OVOL2Q9BRP0 275 aa17.94■□□□□ 0.46
RAB40C-201ENST00000248139 A0A096LPF7 62 aa17.93■□□□□ 0.46
RAB40C-201ENST00000248139 SPATA3Q8NHX4 192 aa17.93■□□□□ 0.46
RAB40C-201ENST00000248139 TRBV6-8A0A0A6YYG3 113 aa17.92■□□□□ 0.46
RAB40C-201ENST00000248139 C11orf68Q9H3H3 251 aaKnown RBP17.92■□□□□ 0.46
RAB40C-201ENST00000248139 MIR7-3HGQ8N6C7 128 aa17.91■□□□□ 0.46
RAB40C-201ENST00000248139 TENM1Q9UKZ4 2725 aa17.91■□□□□ 0.46
RAB40C-201ENST00000248139 CMC4P56277 68 aaPredicted RBP17.9■□□□□ 0.46
RAB40C-201ENST00000248139 COX7B2Q8TF08 81 aa17.9■□□□□ 0.46
RAB40C-201ENST00000248139 H3BT86 120 aa17.9■□□□□ 0.46
RAB40C-201ENST00000248139 OTOGQ6ZRI0 2925 aa17.89■□□□□ 0.45
RAB40C-201ENST00000248139 CLPSL2Q6UWE3 100 aa17.88■□□□□ 0.45
RAB40C-201ENST00000248139 FAM218AQ96MZ4 157 aa17.88■□□□□ 0.45
RAB40C-201ENST00000248139 SHISA2Q6UWI4 295 aa17.87■□□□□ 0.45
RAB40C-201ENST00000248139 LINC01600Q96MT4 127 aa17.87■□□□□ 0.45
RAB40C-201ENST00000248139 COX7A2LO14548 114 aa17.87■□□□□ 0.45
RAB40C-201ENST00000248139 HILS1P60008 231 aa17.87■□□□□ 0.45
RAB40C-201ENST00000248139 TTC32Q5I0X7 151 aa17.87■□□□□ 0.45
RAB40C-201ENST00000248139 CITED1Q99966 193 aa17.87■□□□□ 0.45
RAB40C-201ENST00000248139 HERV-K104P63124 156 aa17.86■□□□□ 0.45
RAB40C-201ENST00000248139 DEFB4AO15263 64 aa17.86■□□□□ 0.45
RAB40C-201ENST00000248139 SNCGO76070 127 aa17.86■□□□□ 0.45
RAB40C-201ENST00000248139 PFN2P35080 140 aa17.86■□□□□ 0.45
RAB40C-201ENST00000248139 LINC00158P58513 81 aa17.86■□□□□ 0.45
RAB40C-201ENST00000248139 PF4P02776 101 aa17.85■□□□□ 0.45
RAB40C-201ENST00000248139 LINC00482Q8N8I6 264 aa17.85■□□□□ 0.45
RAB40C-201ENST00000248139 C15orf53Q8NAA6 179 aa17.85■□□□□ 0.45
RAB40C-201ENST00000248139 IGHV3OR16-9A0A0B4J2B5 98 aa17.85■□□□□ 0.45
RAB40C-201ENST00000248139 FAM110AQ9BQ89 295 aa17.85■□□□□ 0.45
RAB40C-201ENST00000248139 TRRAPQ9Y4A5 3859 aa17.84■□□□□ 0.45
RAB40C-201ENST00000248139 GYPEP15421 78 aa17.84■□□□□ 0.45
RAB40C-201ENST00000248139 LINC00337Q8N6G1 96 aa17.84■□□□□ 0.45
RAB40C-201ENST00000248139 TRAV26-1A0A087WT03 109 aa17.83■□□□□ 0.44
RAB40C-201ENST00000248139 Q9HAA7 133 aa17.82■□□□□ 0.44
RAB40C-201ENST00000248139 IGKV2-28A0A075B6P5 120 aa17.82■□□□□ 0.44
RAB40C-201ENST00000248139 IGKV2D-28P01615 120 aa17.82■□□□□ 0.44
RAB40C-201ENST00000248139 XCL1P47992 114 aa17.82■□□□□ 0.44
RAB40C-201ENST00000248139 SND1-IT1Q9HBX3 110 aa17.81■□□□□ 0.44
RAB40C-201ENST00000248139 GAGE2BQ13066 116 aa17.8■□□□□ 0.44
RAB40C-201ENST00000248139 GAGE2EQ4V326 116 aa17.8■□□□□ 0.44
RAB40C-201ENST00000248139 GAGE2DQ9UEU5 116 aa17.8■□□□□ 0.44
RAB40C-201ENST00000248139 COPS9Q8WXC6 57 aa17.79■□□□□ 0.44
RAB40C-201ENST00000248139 ANAPC13Q9BS18 74 aa17.79■□□□□ 0.44
RAB40C-201ENST00000248139 LINC00959A0A1B0GUT2 108 aa17.78■□□□□ 0.44
RAB40C-201ENST00000248139 CCL18P55774 89 aa17.77■□□□□ 0.44
RAB40C-201ENST00000248139 Q8N3U1 123 aa17.77■□□□□ 0.44
RAB40C-201ENST00000248139 X6R8D5 127 aa17.77■□□□□ 0.44
RAB40C-201ENST00000248139 CRPP02741 224 aa17.76■□□□□ 0.43
RAB40C-201ENST00000248139 ATRQ13535 2644 aa17.75■□□□□ 0.43
RAB40C-201ENST00000248139 A0A087WZ39 114 aa17.75■□□□□ 0.43
RAB40C-201ENST00000248139 BAALC-AS2P0C853 105 aa17.75■□□□□ 0.43
RAB40C-201ENST00000248139 C22orf24Q9Y442 160 aa17.74■□□□□ 0.43
RAB40C-201ENST00000248139 C6orf226Q5I0X4 101 aa17.73■□□□□ 0.43
RAB40C-201ENST00000248139 FAM222AQ5U5X8 452 aa17.73■□□□□ 0.43
RAB40C-201ENST00000248139 NHLRC4P0CG21 123 aaPredicted RBP17.72■□□□□ 0.43
RAB40C-201ENST00000248139 SMIM11BQ8TCY0 68 aa17.72■□□□□ 0.43
RAB40C-201ENST00000248139 DEFB135Q30KP9 77 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms