RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 ICOSQ9Y6W8 199 aa9.25□□□□□ -0.93
NUP85-201ENST00000245544 TM2D3Q9BRN9 247 aa9.24□□□□□ -0.93
NUP85-201ENST00000245544 CLPSL2Q6UWE3 100 aa9.23□□□□□ -0.93
NUP85-201ENST00000245544 TM2D2Q9BX73 214 aa9.23□□□□□ -0.93
NUP85-201ENST00000245544 STAB2Q8WWQ8 2551 aa9.23□□□□□ -0.93
NUP85-201ENST00000245544 A0A1B0GUV1 79 aa9.23□□□□□ -0.93
NUP85-201ENST00000245544 H3BRM9 83 aa9.23□□□□□ -0.93
NUP85-201ENST00000245544 SMIM1B2RUZ4 78 aa9.22□□□□□ -0.93
NUP85-201ENST00000245544 C11orf45Q8TAV5 145 aa9.22□□□□□ -0.93
NUP85-201ENST00000245544 SPATA25Q9BR10 227 aa9.22□□□□□ -0.93
NUP85-201ENST00000245544 IGLV5-39A0A0G2JS06 123 aa9.22□□□□□ -0.93
NUP85-201ENST00000245544 K7ERJ3 54 aa9.22□□□□□ -0.93
NUP85-201ENST00000245544 NDUFA12Q9UI09 145 aa9.22□□□□□ -0.93
NUP85-201ENST00000245544 COX11Q9Y6N1 276 aa9.22□□□□□ -0.93
NUP85-201ENST00000245544 A0A0J9YXY3 114 aa9.21□□□□□ -0.94
NUP85-201ENST00000245544 LINC00959A0A1B0GUT2 108 aa9.21□□□□□ -0.94
NUP85-201ENST00000245544 PTTG1IPP53801 180 aa9.21□□□□□ -0.94
NUP85-201ENST00000245544 TAL2Q16559 108 aa9.21□□□□□ -0.94
NUP85-201ENST00000245544 A6NDN8 102 aa9.2□□□□□ -0.94
NUP85-201ENST00000245544 SRSF9Q13242 221 aaKnown RBP eCLIP9.2□□□□□ -0.941e-9■■■■■ 31.2
NUP85-201ENST00000245544 LYPD5Q6UWN5 251 aa9.2□□□□□ -0.94
NUP85-201ENST00000245544 RAB37Q96AX2 223 aa9.2□□□□□ -0.94
NUP85-201ENST00000245544 NHP2Q9NX24 153 aaKnown RBP9.2□□□□□ -0.94
NUP85-201ENST00000245544 LELP1Q5T871 98 aa9.2□□□□□ -0.94
NUP85-201ENST00000245544 PRKDCP78527 4128 aaKnown RBP9.19□□□□□ -0.94
NUP85-201ENST00000245544 IGHV3OR16-9A0A0B4J2B5 98 aa9.19□□□□□ -0.94
NUP85-201ENST00000245544 ZFAND6Q6FIF0 208 aa9.19□□□□□ -0.94
NUP85-201ENST00000245544 LINC00269Q8N2A0 174 aa9.19□□□□□ -0.94
NUP85-201ENST00000245544 NAA38Q9BRA0 125 aaKnown RBP9.19□□□□□ -0.94
NUP85-201ENST00000245544 DEFB131BA0A096LNP1 70 aa9.19□□□□□ -0.94
NUP85-201ENST00000245544 IGHV3-30P01768 117 aa9.18□□□□□ -0.94
NUP85-201ENST00000245544 ANGP03950 147 aaKnown RBP9.18□□□□□ -0.94
NUP85-201ENST00000245544 IGHV3-30-5P0DP03 117 aa9.18□□□□□ -0.94
NUP85-201ENST00000245544 SH2D6Q7Z4S9 175 aa9.18□□□□□ -0.94
NUP85-201ENST00000245544 C5orf38Q86SI9 138 aa9.18□□□□□ -0.94
NUP85-201ENST00000245544 XCL1P47992 114 aa9.17□□□□□ -0.94
NUP85-201ENST00000245544 LITAFQ99732 161 aa9.17□□□□□ -0.94
NUP85-201ENST00000245544 SPANXB1Q9NS25 103 aaPredicted RBP9.17□□□□□ -0.94
NUP85-201ENST00000245544 H3BNG1 76 aa9.17□□□□□ -0.94
NUP85-201ENST00000245544 ADAMTSL4-AS1Q5T5F5 129 aa9.17□□□□□ -0.94
NUP85-201ENST00000245544 LYSTQ99698 3801 aa9.16□□□□□ -0.94
NUP85-201ENST00000245544 CCL25O15444 150 aa9.16□□□□□ -0.94
NUP85-201ENST00000245544 SMIM13P0DJ93 91 aa9.16□□□□□ -0.94
NUP85-201ENST00000245544 Q9H8V8 135 aa9.16□□□□□ -0.94
NUP85-201ENST00000245544 IGLV10-54A0A075B6I4 117 aa9.16□□□□□ -0.94
NUP85-201ENST00000245544 NDUFA1O15239 70 aa9.16□□□□□ -0.94
NUP85-201ENST00000245544 ZNF625Q96I27 306 aaPredicted RBP9.16□□□□□ -0.94
NUP85-201ENST00000245544 REG3AQ06141 175 aa9.15□□□□□ -0.94
NUP85-201ENST00000245544 WFDC10BQ8IUB3 73 aa9.15□□□□□ -0.94
NUP85-201ENST00000245544 A0A087WZ39 114 aa9.14□□□□□ -0.95
NUP85-201ENST00000245544 SS18Q15532 418 aa9.14□□□□□ -0.95
NUP85-201ENST00000245544 ESRGQ1W209 222 aa9.14□□□□□ -0.95
NUP85-201ENST00000245544 C9orf118A6NHY6 69 aa9.14□□□□□ -0.95
NUP85-201ENST00000245544 H3BUT2 72 aa9.14□□□□□ -0.95
NUP85-201ENST00000245544 MUSTN1Q8IVN3 82 aa9.14□□□□□ -0.95
NUP85-201ENST00000245544 TMEM238C9JI98 176 aa9.13□□□□□ -0.95
NUP85-201ENST00000245544 IGHV3-33P01772 117 aa9.13□□□□□ -0.95
NUP85-201ENST00000245544 DAND5Q8N907 189 aa9.13□□□□□ -0.95
NUP85-201ENST00000245544 TOMM7Q9P0U1 55 aa9.13□□□□□ -0.95
NUP85-201ENST00000245544 KLK12Q9UKR0 248 aa9.13□□□□□ -0.95
NUP85-201ENST00000245544 DNAH1Q9P2D7 4330 aa9.13□□□□□ -0.95
NUP85-201ENST00000245544 A0A1B0GWB2 263 aa9.13□□□□□ -0.95
NUP85-201ENST00000245544 NPC2P61916 151 aa9.13□□□□□ -0.95
NUP85-201ENST00000245544 CHCHD10Q8WYQ3 142 aaPredicted RBP9.13□□□□□ -0.95
NUP85-201ENST00000245544 DYNC2H1Q8NCM8 4307 aaKnown RBP9.12□□□□□ -0.95
NUP85-201ENST00000245544 CSMD3Q7Z407 3707 aa9.12□□□□□ -0.95
NUP85-201ENST00000245544 A0A0U1RRA0 63 aa9.12□□□□□ -0.95
NUP85-201ENST00000245544 EIF4EBP3O60516 100 aaPredicted RBP9.12□□□□□ -0.95
NUP85-201ENST00000245544 COX7B2Q8TF08 81 aa9.12□□□□□ -0.95
NUP85-201ENST00000245544 VAMP3Q15836 100 aa9.11□□□□□ -0.95
NUP85-201ENST00000245544 MEGF8Q7Z7M0 2845 aa9.11□□□□□ -0.95
NUP85-201ENST00000245544 A4D1N5 150 aa9.11□□□□□ -0.95
NUP85-201ENST00000245544 APOMO95445 188 aa9.11□□□□□ -0.95
NUP85-201ENST00000245544 PRSS2P07478 247 aa9.11□□□□□ -0.95
NUP85-201ENST00000245544 TRAV10A0A0B4J240 114 aa9.1□□□□□ -0.95
NUP85-201ENST00000245544 CFC1BP0CG36 223 aa9.1□□□□□ -0.95
NUP85-201ENST00000245544 CFC1P0CG37 223 aa9.1□□□□□ -0.95
NUP85-201ENST00000245544 ENHOQ6UWT2 76 aa9.1□□□□□ -0.95
NUP85-201ENST00000245544 CD164L2Q6UWJ8 174 aa9.1□□□□□ -0.95
NUP85-201ENST00000245544 PRR34Q9NV39 138 aa9.1□□□□□ -0.95
NUP85-201ENST00000245544 TMEM238LA0A1B0GVL6 79 aa9.09□□□□□ -0.95
NUP85-201ENST00000245544 A6NJY4 79 aa9.09□□□□□ -0.95
NUP85-201ENST00000245544 IGLL5B9A064 214 aa9.09□□□□□ -0.95
NUP85-201ENST00000245544 MIAQ16674 131 aa9.09□□□□□ -0.95
NUP85-201ENST00000245544 SPANXDQ9BXN6 97 aa9.09□□□□□ -0.95
NUP85-201ENST00000245544 SPANXCQ9NY87 97 aa9.09□□□□□ -0.95
NUP85-201ENST00000245544 PLECQ15149 4684 aaKnown RBP9.09□□□□□ -0.95
NUP85-201ENST00000245544 A0A1W2PPM0 123 aa9.08□□□□□ -0.96
NUP85-201ENST00000245544 TIMM17BO60830 172 aa9.08□□□□□ -0.96
NUP85-201ENST00000245544 FOXI1Q12951 378 aa9.08□□□□□ -0.96
NUP85-201ENST00000245544 UBE2V1Q13404 147 aa9.08□□□□□ -0.96
NUP85-201ENST00000245544 UBE2WQ96B02 151 aa9.07□□□□□ -0.96
NUP85-201ENST00000245544 COX7A2LO14548 114 aa9.07□□□□□ -0.96
NUP85-201ENST00000245544 MEIG1Q5JSS6 88 aa9.07□□□□□ -0.96
NUP85-201ENST00000245544 GAGE12HA6NDE8 117 aa9.06□□□□□ -0.96
NUP85-201ENST00000245544 RPL24P83731 157 aaKnown RBP9.06□□□□□ -0.96
NUP85-201ENST00000245544 B9D2Q9BPU9 175 aa9.06□□□□□ -0.96
NUP85-201ENST00000245544 PGPEP1Q9NXJ5 209 aa9.06□□□□□ -0.96
NUP85-201ENST00000245544 DNAH7Q8WXX0 4024 aa9.06□□□□□ -0.96
NUP85-201ENST00000245544 TENM2Q9NT68 2774 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms