RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 A8MTW9 85 aa5.55□□□□□ -1.52
RIF1-201ENST00000243326 C6orf99Q4VX62 202 aa5.55□□□□□ -1.52
RIF1-201ENST00000243326 ADAMTSL4-AS1Q5T5F5 129 aa5.55□□□□□ -1.52
RIF1-201ENST00000243326 C1orf195Q5TG92 126 aa5.54□□□□□ -1.52
RIF1-201ENST00000243326 Q9UF83 564 aa5.54□□□□□ -1.52
RIF1-201ENST00000243326 COL4A4P53420 1690 aaPredicted RBP5.54□□□□□ -1.52
RIF1-201ENST00000243326 PLA2G2AP14555 144 aa5.54□□□□□ -1.52
RIF1-201ENST00000243326 ZNF843Q8N446 348 aa5.54□□□□□ -1.52
RIF1-201ENST00000243326 UFSP1Q6NVU6 142 aa5.54□□□□□ -1.52
RIF1-201ENST00000243326 FAM222AQ5U5X8 452 aa5.54□□□□□ -1.52
RIF1-201ENST00000243326 DEFB116Q30KQ4 102 aa5.54□□□□□ -1.52
RIF1-201ENST00000243326 TRBV27A0A0K0K1C4 114 aa5.54□□□□□ -1.52
RIF1-201ENST00000243326 SPANXCQ9NY87 97 aa5.54□□□□□ -1.52
RIF1-201ENST00000243326 BBC3Q96PG8 261 aaPredicted RBP5.53□□□□□ -1.52
RIF1-201ENST00000243326 PTPRSQ13332 1948 aa5.53□□□□□ -1.52
RIF1-201ENST00000243326 LST1O00453 97 aa5.53□□□□□ -1.52
RIF1-201ENST00000243326 SHISA2Q6UWI4 295 aa5.53□□□□□ -1.52
RIF1-201ENST00000243326 Q6ZQY7 126 aa5.53□□□□□ -1.52
RIF1-201ENST00000243326 NOTCH1P46531 2555 aa5.53□□□□□ -1.52
RIF1-201ENST00000243326 CR1P17927 2039 aa5.53□□□□□ -1.52
RIF1-201ENST00000243326 JMJD7-PLA2G4BH0Y9G9 81 aa5.53□□□□□ -1.52
RIF1-201ENST00000243326 H3BUA1 57 aa5.53□□□□□ -1.52
RIF1-201ENST00000243326 ODF3BA8MYP8 253 aa5.53□□□□□ -1.52
RIF1-201ENST00000243326 DEFB113Q30KQ7 82 aa5.53□□□□□ -1.52
RIF1-201ENST00000243326 SERP2Q8N6R1 65 aa5.53□□□□□ -1.52
RIF1-201ENST00000243326 FAM240AA0A1B0GVK7 77 aa5.52□□□□□ -1.53
RIF1-201ENST00000243326 MED14OSP0DP75 135 aa5.52□□□□□ -1.53
RIF1-201ENST00000243326 NDUFB1O75438 58 aa5.52□□□□□ -1.53
RIF1-201ENST00000243326 CDSNQ15517 529 aa5.52□□□□□ -1.53
RIF1-201ENST00000243326 K7EQG2 157 aa5.52□□□□□ -1.53
RIF1-201ENST00000243326 A6NED7 52 aa5.52□□□□□ -1.53
RIF1-201ENST00000243326 MRPL55Q7Z7F7 128 aaKnown RBP5.52□□□□□ -1.53
RIF1-201ENST00000243326 HELZ2Q9BYK8 2649 aaKnown RBP5.52□□□□□ -1.53
RIF1-201ENST00000243326 CCKP06307 115 aa5.52□□□□□ -1.53
RIF1-201ENST00000243326 IGLV2-18A0A075B6J9 118 aa5.52□□□□□ -1.53
RIF1-201ENST00000243326 NBEAL1Q6ZS30 2694 aa5.52□□□□□ -1.53
RIF1-201ENST00000243326 TRBV30A0A0K0K1B3 111 aa5.51□□□□□ -1.53
RIF1-201ENST00000243326 CHD6Q8TD26 2715 aa5.51□□□□□ -1.53
RIF1-201ENST00000243326 RMI2Q96E14 147 aa5.51□□□□□ -1.53
RIF1-201ENST00000243326 A0A096LNJ9 63 aa5.51□□□□□ -1.53
RIF1-201ENST00000243326 J3QLI3 93 aa5.51□□□□□ -1.53
RIF1-201ENST00000243326 Q8N9L7 120 aa5.51□□□□□ -1.53
RIF1-201ENST00000243326 KIR2DL5BQ8NHK3 375 aa5.51□□□□□ -1.53
RIF1-201ENST00000243326 COX7CP15954 63 aa5.51□□□□□ -1.53
RIF1-201ENST00000243326 Q6ZSN1 163 aa5.51□□□□□ -1.53
RIF1-201ENST00000243326 SMIM9A6NGZ8 99 aa5.51□□□□□ -1.53
RIF1-201ENST00000243326 Q8NA96 180 aa5.51□□□□□ -1.53
RIF1-201ENST00000243326 PRR15LQ9BU68 103 aa5.51□□□□□ -1.53
RIF1-201ENST00000243326 GPHB5Q86YW7 130 aa5.51□□□□□ -1.53
RIF1-201ENST00000243326 CSDC2Q9Y534 153 aaKnown RBP5.51□□□□□ -1.53
RIF1-201ENST00000243326 UBE2D4Q9Y2X8 147 aa5.5□□□□□ -1.53
RIF1-201ENST00000243326 CFAP46Q8IYW2 2715 aa5.5□□□□□ -1.53
RIF1-201ENST00000243326 COL5A1P20908 1838 aaPredicted RBP5.5□□□□□ -1.53
RIF1-201ENST00000243326 C4orf3Q8WVX3 66 aa5.5□□□□□ -1.53
RIF1-201ENST00000243326 IGLV4-69A0A075B6H9 119 aa5.5□□□□□ -1.53
RIF1-201ENST00000243326 BEAN1Q3B7T3 259 aa5.5□□□□□ -1.53
RIF1-201ENST00000243326 LRP4O75096 1905 aa5.5□□□□□ -1.53
RIF1-201ENST00000243326 CPAMD8Q8IZJ3 1885 aa5.5□□□□□ -1.53
RIF1-201ENST00000243326 LY6LH3BQJ8 138 aa5.5□□□□□ -1.53
RIF1-201ENST00000243326 C6orf223Q8N319 242 aa5.5□□□□□ -1.53
RIF1-201ENST00000243326 IGFL2Q6UWQ7 119 aa5.5□□□□□ -1.53
RIF1-201ENST00000243326 IGLV9-49A0A0B4J1Y8 123 aa5.49□□□□□ -1.53
RIF1-201ENST00000243326 LMO4P61968 165 aa5.49□□□□□ -1.53
RIF1-201ENST00000243326 C9orf66Q5T8R8 295 aa5.49□□□□□ -1.53
RIF1-201ENST00000243326 A0A087WZ39 114 aa5.49□□□□□ -1.53
RIF1-201ENST00000243326 CCL18P55774 89 aa5.49□□□□□ -1.53
RIF1-201ENST00000243326 M0R2N4 97 aa5.49□□□□□ -1.53
RIF1-201ENST00000243326 UBE2D1P51668 147 aa5.49□□□□□ -1.53
RIF1-201ENST00000243326 K7EMT4 169 aa5.49□□□□□ -1.53
RIF1-201ENST00000243326 CRYGDP07320 174 aa5.49□□□□□ -1.53
RIF1-201ENST00000243326 C4orf26Q17RF5 130 aa5.49□□□□□ -1.53
RIF1-201ENST00000243326 IGF2-ASQ6U949 168 aa5.49□□□□□ -1.53
RIF1-201ENST00000243326 ZMAT4Q9H898 229 aa5.49□□□□□ -1.53
RIF1-201ENST00000243326 MUC22E2RYF6 1773 aaPredicted RBP5.49□□□□□ -1.53
RIF1-201ENST00000243326 CDIP1Q9H305 208 aa5.48□□□□□ -1.53
RIF1-201ENST00000243326 TRBV6-8A0A0A6YYG3 113 aa5.48□□□□□ -1.53
RIF1-201ENST00000243326 DEFB114Q30KQ6 69 aa5.47□□□□□ -1.53
RIF1-201ENST00000243326 EBI3Q14213 229 aa5.47□□□□□ -1.53
RIF1-201ENST00000243326 NSD1Q96L73 2696 aaPredicted RBP5.47□□□□□ -1.53
RIF1-201ENST00000243326 C9orf85Q96MD7 179 aa5.47□□□□□ -1.53
RIF1-201ENST00000243326 LTBP2Q14767 1821 aa5.47□□□□□ -1.53
RIF1-201ENST00000243326 PRO0255Q9UI72 69 aa5.46□□□□□ -1.53
RIF1-201ENST00000243326 UNQ6190/PRO20217Q6UXQ8 127 aa5.46□□□□□ -1.54
RIF1-201ENST00000243326 UTP20O75691 2785 aaKnown RBP5.46□□□□□ -1.54
RIF1-201ENST00000243326 IGIPA6NJ69 53 aa5.46□□□□□ -1.54
RIF1-201ENST00000243326 MIFP14174 115 aa5.45□□□□□ -1.54
RIF1-201ENST00000243326 CASC2Q6XLA1 102 aa5.45□□□□□ -1.54
RIF1-201ENST00000243326 LRRC75A-AS1Q8N1F1 130 aa5.45□□□□□ -1.54
RIF1-201ENST00000243326 LINC00959A0A1B0GUT2 108 aa5.45□□□□□ -1.54
RIF1-201ENST00000243326 FAM19A3Q7Z5A8 133 aa5.45□□□□□ -1.54
RIF1-201ENST00000243326 SMCPP49901 116 aaPredicted RBP5.45□□□□□ -1.54
RIF1-201ENST00000243326 SRCAPQ6ZRS2 3230 aa5.45□□□□□ -1.54
RIF1-201ENST00000243326 POLR2KP53803 58 aaKnown RBP5.45□□□□□ -1.54
RIF1-201ENST00000243326 B9D2Q9BPU9 175 aa5.45□□□□□ -1.54
RIF1-201ENST00000243326 IGLV4-60A0A075B6I1 120 aa5.44□□□□□ -1.54
RIF1-201ENST00000243326 ADAMTS20P59510 1910 aa5.44□□□□□ -1.54
RIF1-201ENST00000243326 PCOTHQ58A44 107 aa5.44□□□□□ -1.54
RIF1-201ENST00000243326 Q6JHZ5 121 aa5.44□□□□□ -1.54
RIF1-201ENST00000243326 ZNF702PQ9H963 129 aa5.43□□□□□ -1.54
RIF1-201ENST00000243326 ITPR3Q14573 2671 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms