RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 IGKV3OR2-268A0A0C4DH90 116 aa11.5□□□□□ -0.57
TVP23C-201ENST00000225576 NHLRC4P0CG21 123 aaPredicted RBP11.5□□□□□ -0.57
TVP23C-201ENST00000225576 IGLV5-39A0A0G2JS06 123 aa11.49□□□□□ -0.57
TVP23C-201ENST00000225576 SS18Q15532 418 aa11.49□□□□□ -0.57
TVP23C-201ENST00000225576 BATFQ16520 125 aa11.49□□□□□ -0.57
TVP23C-201ENST00000225576 ESRGQ1W209 222 aa11.49□□□□□ -0.57
TVP23C-201ENST00000225576 BVES-AS1Q5T3Y7 98 aa11.49□□□□□ -0.57
TVP23C-201ENST00000225576 IGHV3OR16-9A0A0B4J2B5 98 aa11.48□□□□□ -0.57
TVP23C-201ENST00000225576 ANGP03950 147 aaKnown RBP11.48□□□□□ -0.57
TVP23C-201ENST00000225576 LINC00269Q8N2A0 174 aa11.48□□□□□ -0.57
TVP23C-201ENST00000225576 SMIM1B2RUZ4 78 aa11.47□□□□□ -0.57
TVP23C-201ENST00000225576 TAL2Q16559 108 aa11.47□□□□□ -0.57
TVP23C-201ENST00000225576 SCGB1D4Q6XE38 83 aa11.47□□□□□ -0.57
TVP23C-201ENST00000225576 Q8N3U1 123 aa11.47□□□□□ -0.57
TVP23C-201ENST00000225576 TENM3Q9P273 2699 aa11.47□□□□□ -0.57
TVP23C-201ENST00000225576 REG3AQ06141 175 aa11.46□□□□□ -0.57
TVP23C-201ENST00000225576 PRKDCP78527 4128 aaKnown RBP11.46□□□□□ -0.58
TVP23C-201ENST00000225576 ZFAND6Q6FIF0 208 aa11.45□□□□□ -0.58
TVP23C-201ENST00000225576 A0A087WZ39 114 aa11.45□□□□□ -0.58
TVP23C-201ENST00000225576 COL5A1-AS1Q5SY13 56 aa11.45□□□□□ -0.58
TVP23C-201ENST00000225576 NDUFA12Q9UI09 145 aa11.45□□□□□ -0.58
TVP23C-201ENST00000225576 CLPSL2Q6UWE3 100 aa11.44□□□□□ -0.58
TVP23C-201ENST00000225576 PRR34Q9NV39 138 aa11.44□□□□□ -0.58
TVP23C-201ENST00000225576 WFDC10BQ8IUB3 73 aa11.43□□□□□ -0.58
TVP23C-201ENST00000225576 LINC01561Q8N1V8 128 aa11.43□□□□□ -0.58
TVP23C-201ENST00000225576 ORAOV1Q8WV07 137 aa11.43□□□□□ -0.58
TVP23C-201ENST00000225576 HUWE1Q7Z6Z7 4374 aaKnown RBP11.42□□□□□ -0.58
TVP23C-201ENST00000225576 C10orf126Q8N4M7 172 aa11.42□□□□□ -0.58
TVP23C-201ENST00000225576 HIST1H4GQ99525 98 aa11.42□□□□□ -0.58
TVP23C-201ENST00000225576 TM2D2Q9BX73 214 aa11.42□□□□□ -0.58
TVP23C-201ENST00000225576 SPANXB1Q9NS25 103 aaPredicted RBP11.42□□□□□ -0.58
TVP23C-201ENST00000225576 KLK12Q9UKR0 248 aa11.42□□□□□ -0.58
TVP23C-201ENST00000225576 NDUFA1O15239 70 aa11.41□□□□□ -0.58
TVP23C-201ENST00000225576 XCL1P47992 114 aa11.41□□□□□ -0.58
TVP23C-201ENST00000225576 CD164L2Q6UWJ8 174 aa11.41□□□□□ -0.58
TVP23C-201ENST00000225576 CEND1Q8N111 149 aa11.41□□□□□ -0.58
TVP23C-201ENST00000225576 A0A0J9YXY3 114 aa11.4□□□□□ -0.58
TVP23C-201ENST00000225576 IGLL5B9A064 214 aa11.4□□□□□ -0.58
TVP23C-201ENST00000225576 IGHV3-30P01768 117 aa11.4□□□□□ -0.58
TVP23C-201ENST00000225576 IGHV3-33P01772 117 aa11.4□□□□□ -0.58
TVP23C-201ENST00000225576 IGHV3-30-5P0DP03 117 aa11.4□□□□□ -0.58
TVP23C-201ENST00000225576 C5orf38Q86SI9 138 aa11.4□□□□□ -0.58
TVP23C-201ENST00000225576 CHCHD10Q8WYQ3 142 aaPredicted RBP11.4□□□□□ -0.58
TVP23C-201ENST00000225576 GCSHP23434 173 aa11.4□□□□□ -0.59
TVP23C-201ENST00000225576 LINC01556Q5JQF7 62 aa11.4□□□□□ -0.59
TVP23C-201ENST00000225576 SRSF9Q13242 221 aaKnown RBP eCLIP11.39□□□□□ -0.59
TVP23C-201ENST00000225576 ENHOQ6UWT2 76 aa11.39□□□□□ -0.59
TVP23C-201ENST00000225576 CCL18P55774 89 aa11.38□□□□□ -0.59
TVP23C-201ENST00000225576 COX7B2Q8TF08 81 aa11.38□□□□□ -0.59
TVP23C-201ENST00000225576 TRAV8-4A0A0B4J246 113 aa11.37□□□□□ -0.59
TVP23C-201ENST00000225576 A6NDN8 102 aa11.37□□□□□ -0.59
TVP23C-201ENST00000225576 TMEM238C9JI98 176 aa11.37□□□□□ -0.59
TVP23C-201ENST00000225576 FXYD2P54710 66 aa11.37□□□□□ -0.59
TVP23C-201ENST00000225576 ZNF625Q96I27 306 aaPredicted RBP11.37□□□□□ -0.59
TVP23C-201ENST00000225576 Q9H8V8 135 aa11.37□□□□□ -0.59
TVP23C-201ENST00000225576 IGLV10-54A0A075B6I4 117 aa11.36□□□□□ -0.59
TVP23C-201ENST00000225576 COX7A2LO14548 114 aa11.36□□□□□ -0.59
TVP23C-201ENST00000225576 TIMM17BO60830 172 aa11.36□□□□□ -0.59
TVP23C-201ENST00000225576 CRPP02741 224 aa11.36□□□□□ -0.59
TVP23C-201ENST00000225576 DNAH10OSP0CZ25 163 aa11.36□□□□□ -0.59
TVP23C-201ENST00000225576 LINC00588Q9Y4M8 146 aa11.36□□□□□ -0.59
TVP23C-201ENST00000225576 PTTG1IPP53801 180 aa11.35□□□□□ -0.59
TVP23C-201ENST00000225576 HERV-K104P63124 156 aa11.35□□□□□ -0.59
TVP23C-201ENST00000225576 FOXI1Q12951 378 aa11.35□□□□□ -0.59
TVP23C-201ENST00000225576 MIAQ16674 131 aa11.35□□□□□ -0.59
TVP23C-201ENST00000225576 UBE2WQ96B02 151 aa11.35□□□□□ -0.59
TVP23C-201ENST00000225576 LITAFQ99732 161 aa11.35□□□□□ -0.59
TVP23C-201ENST00000225576 GAGE12HA6NDE8 117 aa11.33□□□□□ -0.6
TVP23C-201ENST00000225576 K7EP13 123 aa11.33□□□□□ -0.6
TVP23C-201ENST00000225576 CIRBPQ14011 172 aaKnown RBP11.33□□□□□ -0.6
TVP23C-201ENST00000225576 SFTA2Q6UW10 78 aa11.33□□□□□ -0.6
TVP23C-201ENST00000225576 Q6ZVH6 145 aa11.33□□□□□ -0.6
TVP23C-201ENST00000225576 UPK3BQ9BT76 320 aa11.33□□□□□ -0.6
TVP23C-201ENST00000225576 TOMM7Q9P0U1 55 aa11.33□□□□□ -0.6
TVP23C-201ENST00000225576 A0A1B0GV90 55 aa11.32□□□□□ -0.6
TVP23C-201ENST00000225576 Q8IZM0 81 aa11.32□□□□□ -0.6
TVP23C-201ENST00000225576 SPANXDQ9BXN6 97 aa11.32□□□□□ -0.6
TVP23C-201ENST00000225576 SPANXCQ9NY87 97 aa11.32□□□□□ -0.6
TVP23C-201ENST00000225576 DNAH9Q9NYC9 4486 aa11.32□□□□□ -0.6
TVP23C-201ENST00000225576 TMEM238LA0A1B0GVL6 79 aa11.31□□□□□ -0.6
TVP23C-201ENST00000225576 A6NJY4 79 aa11.31□□□□□ -0.6
TVP23C-201ENST00000225576 TAX1BP3O14907 124 aa11.31□□□□□ -0.6
TVP23C-201ENST00000225576 MALP21145 153 aa11.31□□□□□ -0.6
TVP23C-201ENST00000225576 SMIM13P0DJ93 91 aa11.3□□□□□ -0.6
TVP23C-201ENST00000225576 C6orf226Q5I0X4 101 aa11.3□□□□□ -0.6
TVP23C-201ENST00000225576 ADAMTSL4-AS1Q5T5F5 129 aa11.3□□□□□ -0.6
TVP23C-201ENST00000225576 APLNQ9ULZ1 77 aa11.3□□□□□ -0.6
TVP23C-201ENST00000225576 A0A1B0GWB2 263 aa11.3□□□□□ -0.6
TVP23C-201ENST00000225576 NUPR2A6NF83 97 aa11.3□□□□□ -0.6
TVP23C-201ENST00000225576 APOMO95445 188 aa11.3□□□□□ -0.6
TVP23C-201ENST00000225576 PRSS2P07478 247 aa11.3□□□□□ -0.6
TVP23C-201ENST00000225576 NHP2Q9NX24 153 aaKnown RBP11.3□□□□□ -0.6
TVP23C-201ENST00000225576 KLK5Q9Y337 293 aaPredicted RBP11.3□□□□□ -0.6
TVP23C-201ENST00000225576 IFITM1P13164 125 aa11.28□□□□□ -0.6
TVP23C-201ENST00000225576 RPL24P83731 157 aaKnown RBP11.28□□□□□ -0.6
TVP23C-201ENST00000225576 KIAA0087Q14695 138 aa11.28□□□□□ -0.6
TVP23C-201ENST00000225576 KRTAP26-1Q6PEX3 210 aa11.28□□□□□ -0.6
TVP23C-201ENST00000225576 MUSTN1Q8IVN3 82 aa11.28□□□□□ -0.6
TVP23C-201ENST00000225576 COX11Q9Y6N1 276 aa11.28□□□□□ -0.6
TVP23C-201ENST00000225576 CXCL5P42830 114 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms