RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 PMVKQ15126 192 aa17.51■□□□□ 0.39
STUB1-201ENST00000219548 SPATA12Q7Z6I5 190 aa17.51■□□□□ 0.39
STUB1-201ENST00000219548 CST9LQ9H4G1 147 aa17.51■□□□□ 0.39
STUB1-201ENST00000219548 COX6A2Q02221 97 aa17.5■□□□□ 0.39
STUB1-201ENST00000219548 C5orf38Q86SI9 138 aa17.5■□□□□ 0.39
STUB1-201ENST00000219548 C15orf56Q8N910 161 aa17.49■□□□□ 0.39
STUB1-201ENST00000219548 IFI27L1Q96BM0 104 aa17.49■□□□□ 0.39
STUB1-201ENST00000219548 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.48■□□□□ 0.39
STUB1-201ENST00000219548 IGHV3OR16-9A0A0B4J2B5 98 aa17.48■□□□□ 0.39
STUB1-201ENST00000219548 COX7A2LO14548 114 aa17.48■□□□□ 0.39
STUB1-201ENST00000219548 LEPROTL1O95214 131 aa17.48■□□□□ 0.39
STUB1-201ENST00000219548 COA6Q5JTJ3 125 aaKnown RBP17.48■□□□□ 0.39
STUB1-201ENST00000219548 A0A0J9YXV3 536 aa17.47■□□□□ 0.39
STUB1-201ENST00000219548 FABP4P15090 132 aa17.47■□□□□ 0.39
STUB1-201ENST00000219548 FAM19A3Q7Z5A8 133 aa17.46■□□□□ 0.39
STUB1-201ENST00000219548 DYNC1H1Q14204 4646 aaKnown RBP17.46■□□□□ 0.39
STUB1-201ENST00000219548 PRSS1P07477 247 aa17.45■□□□□ 0.38
STUB1-201ENST00000219548 MALP21145 153 aa17.45■□□□□ 0.38
STUB1-201ENST00000219548 C14orf177Q52M58 125 aa17.45■□□□□ 0.38
STUB1-201ENST00000219548 HIGD2BQ4VC39 106 aa17.44■□□□□ 0.38
STUB1-201ENST00000219548 CFAP161Q6P656 301 aa17.44■□□□□ 0.38
STUB1-201ENST00000219548 hDV102S1A0JD36 115 aa17.43■□□□□ 0.38
STUB1-201ENST00000219548 GEMIN7Q9H840 131 aaKnown RBP17.43■□□□□ 0.38
STUB1-201ENST00000219548 IGHV1-58A0A0C4DH39 117 aa17.42■□□□□ 0.38
STUB1-201ENST00000219548 HERVK_113P63121 156 aa17.41■□□□□ 0.38
STUB1-201ENST00000219548 SEC11AP67812 179 aa17.41■□□□□ 0.38
STUB1-201ENST00000219548 HSPB8Q9UJY1 196 aa17.41■□□□□ 0.38
STUB1-201ENST00000219548 TINCRA0A1B0GVN0 87 aa17.4■□□□□ 0.38
STUB1-201ENST00000219548 A0A087WZ39 114 aa17.39■□□□□ 0.37
STUB1-201ENST00000219548 H0Y8G0 127 aa17.39■□□□□ 0.37
STUB1-201ENST00000219548 PGPEP1Q9NXJ5 209 aa17.39■□□□□ 0.37
STUB1-201ENST00000219548 CDKN2A-AS1Q9UH64 79 aa17.39■□□□□ 0.37
STUB1-201ENST00000219548 IGLV4-69A0A075B6H9 119 aa17.38■□□□□ 0.37
STUB1-201ENST00000219548 GVQW2A0A096LPI5 108 aaPredicted RBP17.38■□□□□ 0.37
STUB1-201ENST00000219548 IGLV5-52A0A0A0MRZ9 124 aa17.38■□□□□ 0.37
STUB1-201ENST00000219548 NTN5Q8WTR8 489 aaPredicted RBP17.38■□□□□ 0.37
STUB1-201ENST00000219548 LINC00526Q96FQ7 95 aa17.38■□□□□ 0.37
STUB1-201ENST00000219548 LINC00469Q8N7U9 141 aa17.37■□□□□ 0.37
STUB1-201ENST00000219548 CHAC1Q9BUX1 264 aa17.37■□□□□ 0.37
STUB1-201ENST00000219548 CHTOPQ9Y3Y2 248 aaKnown RBP17.37■□□□□ 0.37
STUB1-201ENST00000219548 LRP1BQ9NZR2 4599 aa17.37■□□□□ 0.37
STUB1-201ENST00000219548 TRAV12-1A0A0B4J245 112 aa17.37■□□□□ 0.37
STUB1-201ENST00000219548 APOMO95445 188 aa17.37■□□□□ 0.37
STUB1-201ENST00000219548 IGLC3P0DOY3 106 aa17.37■□□□□ 0.37
STUB1-201ENST00000219548 C16orf90A8MZG2 172 aa17.35■□□□□ 0.37
STUB1-201ENST00000219548 CDPF1Q6NVV7 123 aa17.35■□□□□ 0.37
STUB1-201ENST00000219548 ORAOV1Q8WV07 137 aa17.35■□□□□ 0.37
STUB1-201ENST00000219548 IGHV3-64A0A075B6Q5 118 aa17.34■□□□□ 0.37
STUB1-201ENST00000219548 IGLV5-45A0A087WSX0 123 aa17.34■□□□□ 0.37
STUB1-201ENST00000219548 SLPIP03973 132 aa17.34■□□□□ 0.37
STUB1-201ENST00000219548 C11orf86A6NJI1 115 aa17.33■□□□□ 0.37
STUB1-201ENST00000219548 MRPL35Q9NZE8 188 aaKnown RBP17.33■□□□□ 0.37
STUB1-201ENST00000219548 ZNF561-AS1K7EIQ3 104 aa17.32■□□□□ 0.36
STUB1-201ENST00000219548 S100A6P06703 90 aa17.32■□□□□ 0.36
STUB1-201ENST00000219548 SPAG11BQ08648 103 aa17.32■□□□□ 0.36
STUB1-201ENST00000219548 PACRGQ96M98 296 aaPredicted RBP17.32■□□□□ 0.36
STUB1-201ENST00000219548 ODF1Q14990 250 aa17.31■□□□□ 0.36
STUB1-201ENST00000219548 LINC01620Q4KN68 170 aa17.31■□□□□ 0.36
STUB1-201ENST00000219548 MAP1LC3CQ9BXW4 147 aa17.31■□□□□ 0.36
STUB1-201ENST00000219548 F8VRH5 84 aa17.31■□□□□ 0.36
STUB1-201ENST00000219548 LINC01561Q8N1V8 128 aa17.31■□□□□ 0.36
STUB1-201ENST00000219548 OR10D4PQ8NGN7 298 aa17.31■□□□□ 0.36
STUB1-201ENST00000219548 ZNF22P17026 224 aaPredicted RBP17.3■□□□□ 0.36
STUB1-201ENST00000219548 CNBPP62633 177 aaKnown RBP17.29■□□□□ 0.36
STUB1-201ENST00000219548 HIST3H2BBQ8N257 126 aa17.29■□□□□ 0.36
STUB1-201ENST00000219548 SPINK8P0C7L1 97 aa17.28■□□□□ 0.36
STUB1-201ENST00000219548 SMIM1B2RUZ4 78 aa17.27■□□□□ 0.36
STUB1-201ENST00000219548 GCSHP23434 173 aa17.27■□□□□ 0.36
STUB1-201ENST00000219548 PMCHL2Q9BQD1 86 aa17.27■□□□□ 0.36
STUB1-201ENST00000219548 H3BRM9 83 aa17.25■□□□□ 0.35
STUB1-201ENST00000219548 SYS1-DBNDD2H3BUS1 97 aa17.25■□□□□ 0.35
STUB1-201ENST00000219548 SNRPEP62304 92 aaKnown RBP17.25■□□□□ 0.35
STUB1-201ENST00000219548 TMEM170BQ5T4T1 132 aa17.25■□□□□ 0.35
STUB1-201ENST00000219548 TOMM7Q9P0U1 55 aa17.25■□□□□ 0.35
STUB1-201ENST00000219548 BIRC6Q9NR09 4857 aa17.25■□□□□ 0.35
STUB1-201ENST00000219548 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.24■□□□□ 0.35
STUB1-201ENST00000219548 KRTAP10-1P60331 282 aa17.24■□□□□ 0.35
STUB1-201ENST00000219548 KIAA0087Q14695 138 aa17.24■□□□□ 0.35
STUB1-201ENST00000219548 CAMK2N2Q96S95 79 aa17.24■□□□□ 0.35
STUB1-201ENST00000219548 C3orf79P0CE67 100 aa17.23■□□□□ 0.35
STUB1-201ENST00000219548 S100A2P29034 98 aa17.23■□□□□ 0.35
STUB1-201ENST00000219548 SYCNQ0VAF6 134 aa17.23■□□□□ 0.35
STUB1-201ENST00000219548 C9orf163Q8N9P6 203 aa17.23■□□□□ 0.35
STUB1-201ENST00000219548 C2orf48Q96LS8 159 aa17.23■□□□□ 0.35
STUB1-201ENST00000219548 DNAH8Q96JB1 4490 aa17.23■□□□□ 0.35
STUB1-201ENST00000219548 KRTDAPP60985 99 aa17.22■□□□□ 0.35
STUB1-201ENST00000219548 Q6ZRU5 148 aa17.22■□□□□ 0.35
STUB1-201ENST00000219548 CARD19Q96LW7 228 aa17.22■□□□□ 0.35
STUB1-201ENST00000219548 HIST1H2BLQ99880 126 aa17.21■□□□□ 0.35
STUB1-201ENST00000219548 PRSS2P07478 247 aa17.2■□□□□ 0.34
STUB1-201ENST00000219548 APOBP04114 4563 aaKnown RBP17.2■□□□□ 0.34
STUB1-201ENST00000219548 C5orf52A6NGY3 159 aa17.19■□□□□ 0.34
STUB1-201ENST00000219548 C2orf82Q6UX34 121 aa17.19■□□□□ 0.34
STUB1-201ENST00000219548 Q8IZM0 81 aa17.19■□□□□ 0.34
STUB1-201ENST00000219548 DPM2O94777 84 aa17.18■□□□□ 0.34
STUB1-201ENST00000219548 PLNP26678 52 aa17.18■□□□□ 0.34
STUB1-201ENST00000219548 PET117Q6UWS5 81 aa17.18■□□□□ 0.34
STUB1-201ENST00000219548 C6orf226Q5I0X4 101 aa17.18■□□□□ 0.34
STUB1-201ENST00000219548 C10orf25Q5T742 122 aa17.18■□□□□ 0.34
STUB1-201ENST00000219548 COX7B2Q8TF08 81 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms