RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 LECT2O14960 151 aa18.05■□□□□ 0.48
CHMP4B-201ENST00000217402 CHTOPQ9Y3Y2 248 aaKnown RBP18.05■□□□□ 0.48
CHMP4B-201ENST00000217402 FAM19A3Q7Z5A8 133 aa18.05■□□□□ 0.48
CHMP4B-201ENST00000217402 GEMIN7Q9H840 131 aaKnown RBP18.05■□□□□ 0.48
CHMP4B-201ENST00000217402 C5orf38Q86SI9 138 aa18.04■□□□□ 0.48
CHMP4B-201ENST00000217402 FRAS1Q86XX4 4008 aa18.03■□□□□ 0.48
CHMP4B-201ENST00000217402 SEC11AP67812 179 aa18.03■□□□□ 0.48
CHMP4B-201ENST00000217402 TNP2Q05952 138 aa18.03■□□□□ 0.48
CHMP4B-201ENST00000217402 IGLV4-69A0A075B6H9 119 aa18.02■□□□□ 0.48
CHMP4B-201ENST00000217402 IGHV3OR16-9A0A0B4J2B5 98 aa18.02■□□□□ 0.48
CHMP4B-201ENST00000217402 KRTDAPP60985 99 aa18.02■□□□□ 0.48
CHMP4B-201ENST00000217402 CHAC1Q9BUX1 264 aa18.02■□□□□ 0.48
CHMP4B-201ENST00000217402 TINCRA0A1B0GVN0 87 aa18.01■□□□□ 0.47
CHMP4B-201ENST00000217402 COX7A2LO14548 114 aa18.01■□□□□ 0.47
CHMP4B-201ENST00000217402 HERVK_113P63121 156 aa18.01■□□□□ 0.47
CHMP4B-201ENST00000217402 WFDC2Q14508 124 aa18.01■□□□□ 0.47
CHMP4B-201ENST00000217402 ODF1Q14990 250 aa18.01■□□□□ 0.47
CHMP4B-201ENST00000217402 MRPL35Q9NZE8 188 aaKnown RBP18.01■□□□□ 0.47
CHMP4B-201ENST00000217402 SYS1-DBNDD2H3BUS1 97 aa18.01■□□□□ 0.47
CHMP4B-201ENST00000217402 C3orf79P0CE67 100 aa18.01■□□□□ 0.47
CHMP4B-201ENST00000217402 IGLC3P0DOY3 106 aa18.01■□□□□ 0.47
CHMP4B-201ENST00000217402 LINC00469Q8N7U9 141 aa18■□□□□ 0.47
CHMP4B-201ENST00000217402 PMCHL2Q9BQD1 86 aa18■□□□□ 0.47
CHMP4B-201ENST00000217402 LRCOL1A6NCL2 159 aa17.99■□□□□ 0.47
CHMP4B-201ENST00000217402 F8VRH5 84 aa17.99■□□□□ 0.47
CHMP4B-201ENST00000217402 MALP21145 153 aa17.99■□□□□ 0.47
CHMP4B-201ENST00000217402 USP17L23D6RBM5 183 aa17.98■□□□□ 0.47
CHMP4B-201ENST00000217402 SPATA12Q7Z6I5 190 aa17.98■□□□□ 0.47
CHMP4B-201ENST00000217402 CDKN2A-AS1Q9UH64 79 aa17.98■□□□□ 0.47
CHMP4B-201ENST00000217402 C11orf86A6NJI1 115 aa17.98■□□□□ 0.47
CHMP4B-201ENST00000217402 A0A087WTM6 91 aa17.97■□□□□ 0.47
CHMP4B-201ENST00000217402 DNAH17Q9UFH2 4485 aa17.95■□□□□ 0.46
CHMP4B-201ENST00000217402 A0A087WZ39 114 aa17.95■□□□□ 0.46
CHMP4B-201ENST00000217402 LINC00336Q6ZUF6 198 aa17.95■□□□□ 0.46
CHMP4B-201ENST00000217402 IGLV5-45A0A087WSX0 123 aa17.94■□□□□ 0.46
CHMP4B-201ENST00000217402 PET117Q6UWS5 81 aa17.94■□□□□ 0.46
CHMP4B-201ENST00000217402 C15orf56Q8N910 161 aa17.94■□□□□ 0.46
CHMP4B-201ENST00000217402 ZNF22P17026 224 aaPredicted RBP17.93■□□□□ 0.46
CHMP4B-201ENST00000217402 HIGD2BQ4VC39 106 aa17.92■□□□□ 0.46
CHMP4B-201ENST00000217402 TMEM170BQ5T4T1 132 aa17.92■□□□□ 0.46
CHMP4B-201ENST00000217402 IGHV1-58A0A0C4DH39 117 aa17.91■□□□□ 0.46
CHMP4B-201ENST00000217402 CFAP161Q6P656 301 aa17.91■□□□□ 0.46
CHMP4B-201ENST00000217402 DPM2O94777 84 aa17.9■□□□□ 0.46
CHMP4B-201ENST00000217402 LINC01545Q5VT33 79 aa17.9■□□□□ 0.46
CHMP4B-201ENST00000217402 APOMO95445 188 aa17.9■□□□□ 0.46
CHMP4B-201ENST00000217402 PLNP26678 52 aa17.9■□□□□ 0.46
CHMP4B-201ENST00000217402 hDV102S1A0JD36 115 aa17.89■□□□□ 0.45
CHMP4B-201ENST00000217402 H3BRM9 83 aa17.89■□□□□ 0.45
CHMP4B-201ENST00000217402 EREGO14944 169 aa17.89■□□□□ 0.45
CHMP4B-201ENST00000217402 SPINK8P0C7L1 97 aa17.89■□□□□ 0.45
CHMP4B-201ENST00000217402 OR10D4PQ8NGN7 298 aa17.89■□□□□ 0.45
CHMP4B-201ENST00000217402 ORAOV1Q8WV07 137 aa17.89■□□□□ 0.45
CHMP4B-201ENST00000217402 FAT2Q9NYQ8 4349 aa17.89■□□□□ 0.45
CHMP4B-201ENST00000217402 Q8N814 137 aa17.88■□□□□ 0.45
CHMP4B-201ENST00000217402 IGHV3-64A0A075B6Q5 118 aa17.87■□□□□ 0.45
CHMP4B-201ENST00000217402 IGKCP01834 107 aa17.87■□□□□ 0.45
CHMP4B-201ENST00000217402 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.87■□□□□ 0.45
CHMP4B-201ENST00000217402 SMIM1B2RUZ4 78 aa17.87■□□□□ 0.45
CHMP4B-201ENST00000217402 C14orf177Q52M58 125 aa17.87■□□□□ 0.45
CHMP4B-201ENST00000217402 LINC00526Q96FQ7 95 aa17.87■□□□□ 0.45
CHMP4B-201ENST00000217402 GVQW2A0A096LPI5 108 aaPredicted RBP17.86■□□□□ 0.45
CHMP4B-201ENST00000217402 C20orf202A1L168 122 aa17.86■□□□□ 0.45
CHMP4B-201ENST00000217402 LINC01561Q8N1V8 128 aa17.86■□□□□ 0.45
CHMP4B-201ENST00000217402 SPAG11BQ08648 103 aa17.85■□□□□ 0.45
CHMP4B-201ENST00000217402 ZNF561-AS1K7EIQ3 104 aa17.83■□□□□ 0.45
CHMP4B-201ENST00000217402 TOMM7Q9P0U1 55 aa17.83■□□□□ 0.45
CHMP4B-201ENST00000217402 FUSP35637 526 aaKnown RBP eCLIP17.83■□□□□ 0.44
CHMP4B-201ENST00000217402 TMEM223A0PJW6 202 aa17.81■□□□□ 0.44
CHMP4B-201ENST00000217402 ATOH7Q8N100 152 aa17.8■□□□□ 0.44
CHMP4B-201ENST00000217402 PRSS2P07478 247 aa17.78■□□□□ 0.44
CHMP4B-201ENST00000217402 KRTAP10-2P60368 255 aa17.78■□□□□ 0.44
CHMP4B-201ENST00000217402 KIAA0087Q14695 138 aa17.77■□□□□ 0.44
CHMP4B-201ENST00000217402 IGLV5-39A0A0G2JS06 123 aa17.76■□□□□ 0.43
CHMP4B-201ENST00000217402 A0A1B0GVY2 172 aa17.76■□□□□ 0.43
CHMP4B-201ENST00000217402 COX7B2Q8TF08 81 aa17.76■□□□□ 0.43
CHMP4B-201ENST00000217402 SCGB1D1O95968 90 aa17.76■□□□□ 0.43
CHMP4B-201ENST00000217402 SLPIP03973 132 aa17.76■□□□□ 0.43
CHMP4B-201ENST00000217402 C6orf226Q5I0X4 101 aa17.75■□□□□ 0.43
CHMP4B-201ENST00000217402 Q8IZM0 81 aa17.75■□□□□ 0.43
CHMP4B-201ENST00000217402 NTN5Q8WTR8 489 aaPredicted RBP17.75■□□□□ 0.43
CHMP4B-201ENST00000217402 CAMK2N2Q96S95 79 aa17.74■□□□□ 0.43
CHMP4B-201ENST00000217402 HERVK_113P61574 105 aa17.73■□□□□ 0.43
CHMP4B-201ENST00000217402 IGLV5-52A0A0A0MRZ9 124 aa17.72■□□□□ 0.43
CHMP4B-201ENST00000217402 C2orf82Q6UX34 121 aa17.72■□□□□ 0.43
CHMP4B-201ENST00000217402 STPG4Q8N801 248 aa17.72■□□□□ 0.43
CHMP4B-201ENST00000217402 C2orf48Q96LS8 159 aa17.72■□□□□ 0.43
CHMP4B-201ENST00000217402 DNAH11Q96DT5 4516 aa17.72■□□□□ 0.43
CHMP4B-201ENST00000217402 PKD1P98161 4303 aa17.72■□□□□ 0.43
CHMP4B-201ENST00000217402 CNBPP62633 177 aaKnown RBP17.72■□□□□ 0.43
CHMP4B-201ENST00000217402 CKS1BP61024 79 aa17.71■□□□□ 0.43
CHMP4B-201ENST00000217402 SYCNQ0VAF6 134 aa17.71■□□□□ 0.43
CHMP4B-201ENST00000217402 AKR1D1P51857 326 aa17.7■□□□□ 0.42
CHMP4B-201ENST00000217402 Q6ZRU5 148 aa17.7■□□□□ 0.42
CHMP4B-201ENST00000217402 NDUFA1O15239 70 aa17.69■□□□□ 0.42
CHMP4B-201ENST00000217402 CARD19Q96LW7 228 aa17.69■□□□□ 0.42
CHMP4B-201ENST00000217402 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.69■□□□□ 0.42
CHMP4B-201ENST00000217402 C10orf25Q5T742 122 aa17.69■□□□□ 0.42
CHMP4B-201ENST00000217402 UNQ6190/PRO20217Q6UXQ8 127 aa17.69■□□□□ 0.42
CHMP4B-201ENST00000217402 PGPEP1Q9NXJ5 209 aa17.69■□□□□ 0.42
CHMP4B-201ENST00000217402 LINC01620Q4KN68 170 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms