RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 SHISA2Q6UWI4 295 aa8.55□□□□□ -1.04
DNMT3B-201ENST00000201963 GPHB5Q86YW7 130 aa8.55□□□□□ -1.04
DNMT3B-201ENST00000201963 PSMB8P28062 276 aa8.54□□□□□ -1.04
DNMT3B-201ENST00000201963 COX8CQ7Z4L0 72 aa8.54□□□□□ -1.04
DNMT3B-201ENST00000201963 C20orf197Q8N268 126 aa8.54□□□□□ -1.04
DNMT3B-201ENST00000201963 RAI1Q7Z5J4 1906 aaPredicted RBP8.54□□□□□ -1.04
DNMT3B-201ENST00000201963 TRAV25A0A0B4J276 109 aa8.54□□□□□ -1.04
DNMT3B-201ENST00000201963 TRBV6-5A0A0K0K1A5 114 aa8.54□□□□□ -1.04
DNMT3B-201ENST00000201963 TSHBP01222 138 aa8.54□□□□□ -1.04
DNMT3B-201ENST00000201963 Q6Q795 121 aa8.54□□□□□ -1.04
DNMT3B-201ENST00000201963 CITED2Q99967 270 aaPredicted RBP8.54□□□□□ -1.04
DNMT3B-201ENST00000201963 ZNF580Q9UK33 172 aa8.54□□□□□ -1.04
DNMT3B-201ENST00000201963 TNFRSF13BO14836 293 aaPredicted RBP8.53□□□□□ -1.04
DNMT3B-201ENST00000201963 CMC4P56277 68 aaPredicted RBP8.53□□□□□ -1.04
DNMT3B-201ENST00000201963 ANGP03950 147 aaKnown RBP8.52□□□□□ -1.04
DNMT3B-201ENST00000201963 LINC00694P0DN24 101 aa8.52□□□□□ -1.04
DNMT3B-201ENST00000201963 C5orf47Q569G3 176 aa8.52□□□□□ -1.04
DNMT3B-201ENST00000201963 POM121L12Q8N7R1 296 aa8.52□□□□□ -1.04
DNMT3B-201ENST00000201963 K7EQD1 137 aa8.52□□□□□ -1.05
DNMT3B-201ENST00000201963 M0QXV9 152 aa8.52□□□□□ -1.05
DNMT3B-201ENST00000201963 SLPIP03973 132 aa8.52□□□□□ -1.05
DNMT3B-201ENST00000201963 CRYGDP07320 174 aa8.52□□□□□ -1.05
DNMT3B-201ENST00000201963 Q8N6K4 173 aa8.52□□□□□ -1.05
DNMT3B-201ENST00000201963 IMUPQ9GZP8 106 aa8.52□□□□□ -1.05
DNMT3B-201ENST00000201963 IGLV10-54A0A075B6I4 117 aa8.51□□□□□ -1.05
DNMT3B-201ENST00000201963 C10orf99Q6UWK7 81 aa8.51□□□□□ -1.05
DNMT3B-201ENST00000201963 JMJD7-PLA2G4BH0Y9G9 81 aa8.5□□□□□ -1.05
DNMT3B-201ENST00000201963 PRM2P04554 102 aa8.5□□□□□ -1.05
DNMT3B-201ENST00000201963 TIRAPP58753 221 aa8.5□□□□□ -1.05
DNMT3B-201ENST00000201963 UTP20O75691 2785 aaKnown RBP8.5□□□□□ -1.05
DNMT3B-201ENST00000201963 K7EQG2 157 aa8.5□□□□□ -1.05
DNMT3B-201ENST00000201963 CCL24O00175 119 aa8.5□□□□□ -1.05
DNMT3B-201ENST00000201963 NCR3O14931 201 aa8.5□□□□□ -1.05
DNMT3B-201ENST00000201963 NDUFA1O15239 70 aa8.5□□□□□ -1.05
DNMT3B-201ENST00000201963 COX7CP15954 63 aa8.5□□□□□ -1.05
DNMT3B-201ENST00000201963 KLLNB2CW77 178 aa8.49□□□□□ -1.05
DNMT3B-201ENST00000201963 PYGO1Q9Y3Y4 419 aa8.49□□□□□ -1.05
DNMT3B-201ENST00000201963 Q6YL49 198 aa8.48□□□□□ -1.05
DNMT3B-201ENST00000201963 FAM240AA0A1B0GVK7 77 aa8.48□□□□□ -1.05
DNMT3B-201ENST00000201963 USP17L23D6RBM5 183 aa8.48□□□□□ -1.05
DNMT3B-201ENST00000201963 PRB2P02812 416 aaPredicted RBP8.48□□□□□ -1.05
DNMT3B-201ENST00000201963 ADAMTSL4-AS1Q5T5F5 129 aa8.48□□□□□ -1.05
DNMT3B-201ENST00000201963 KLK5Q9Y337 293 aaPredicted RBP8.48□□□□□ -1.05
DNMT3B-201ENST00000201963 TMEM258P61165 79 aa8.47□□□□□ -1.05
DNMT3B-201ENST00000201963 DAD1P61803 113 aa8.47□□□□□ -1.05
DNMT3B-201ENST00000201963 RNF152Q8N8N0 203 aa8.47□□□□□ -1.05
DNMT3B-201ENST00000201963 A6NDX4 124 aa8.47□□□□□ -1.05
DNMT3B-201ENST00000201963 F5H768 121 aa8.46□□□□□ -1.05
DNMT3B-201ENST00000201963 HILS1P60008 231 aa8.46□□□□□ -1.05
DNMT3B-201ENST00000201963 MRPS36P82909 103 aaKnown RBP8.46□□□□□ -1.05
DNMT3B-201ENST00000201963 RPL18AQ02543 176 aaKnown RBP8.46□□□□□ -1.05
DNMT3B-201ENST00000201963 FAM110AQ9BQ89 295 aa8.46□□□□□ -1.05
DNMT3B-201ENST00000201963 CRYBG3Q68DQ2 2970 aa8.46□□□□□ -1.05
DNMT3B-201ENST00000201963 SERP2Q8N6R1 65 aa8.46□□□□□ -1.05
DNMT3B-201ENST00000201963 ZNF561-AS1K7EIQ3 104 aa8.46□□□□□ -1.06
DNMT3B-201ENST00000201963 Q6ZTI0 123 aa8.46□□□□□ -1.06
DNMT3B-201ENST00000201963 ODF3Q96PU9 254 aa8.46□□□□□ -1.06
DNMT3B-201ENST00000201963 TIMM17BO60830 172 aa8.45□□□□□ -1.06
DNMT3B-201ENST00000201963 ENHOQ6UWT2 76 aa8.45□□□□□ -1.06
DNMT3B-201ENST00000201963 C9orf85Q96MD7 179 aa8.45□□□□□ -1.06
DNMT3B-201ENST00000201963 LINC01006Q8NI28 216 aa8.45□□□□□ -1.06
DNMT3B-201ENST00000201963 UPK3BQ9BT76 320 aa8.45□□□□□ -1.06
DNMT3B-201ENST00000201963 TMEM256-PLSCR3K7ERE1 68 aa8.45□□□□□ -1.06
DNMT3B-201ENST00000201963 GYPEP15421 78 aa8.44□□□□□ -1.06
DNMT3B-201ENST00000201963 TRBV10-1A0A0K0K1A3 114 aa8.44□□□□□ -1.06
DNMT3B-201ENST00000201963 PPDPFQ9H3Y8 114 aa8.44□□□□□ -1.06
DNMT3B-201ENST00000201963 UBE2D4Q9Y2X8 147 aa8.44□□□□□ -1.06
DNMT3B-201ENST00000201963 COL27A1Q8IZC6 1860 aaPredicted RBP8.44□□□□□ -1.06
DNMT3B-201ENST00000201963 LOC107984640A0A0U1RRK4 108 aa8.43□□□□□ -1.06
DNMT3B-201ENST00000201963 EDN2P20800 178 aa8.43□□□□□ -1.06
DNMT3B-201ENST00000201963 DPH3Q96FX2 82 aa8.43□□□□□ -1.06
DNMT3B-201ENST00000201963 ESM1Q9NQ30 184 aa8.43□□□□□ -1.06
DNMT3B-201ENST00000201963 NOTCH1P46531 2555 aa8.43□□□□□ -1.06
DNMT3B-201ENST00000201963 A0A087WVE0 104 aa8.43□□□□□ -1.06
DNMT3B-201ENST00000201963 RELNP78509 3460 aa8.43□□□□□ -1.06
DNMT3B-201ENST00000201963 FAM236DA0A1B0GTK5 79 aa8.42□□□□□ -1.06
DNMT3B-201ENST00000201963 FAM236CP0DP71 79 aa8.42□□□□□ -1.06
DNMT3B-201ENST00000201963 BRK1Q8WUW1 75 aa8.42□□□□□ -1.06
DNMT3B-201ENST00000201963 LINC01546A6NGU7 62 aa8.42□□□□□ -1.06
DNMT3B-201ENST00000201963 DCANP1Q8TF63 244 aa8.42□□□□□ -1.06
DNMT3B-201ENST00000201963 MAP6D1Q9H9H5 199 aa8.42□□□□□ -1.06
DNMT3B-201ENST00000201963 DEFB105AQ8NG35 78 aa8.41□□□□□ -1.06
DNMT3B-201ENST00000201963 LINC00526Q96FQ7 95 aa8.41□□□□□ -1.06
DNMT3B-201ENST00000201963 SMIM9A6NGZ8 99 aa8.41□□□□□ -1.06
DNMT3B-201ENST00000201963 WFDC9Q8NEX5 89 aa8.4□□□□□ -1.06
DNMT3B-201ENST00000201963 SMIM11BQ8TCY0 68 aa8.4□□□□□ -1.06
DNMT3B-201ENST00000201963 IGHV4-28A0A0C4DH34 117 aa8.4□□□□□ -1.06
DNMT3B-201ENST00000201963 SCXQ7RTU7 201 aa8.4□□□□□ -1.06
DNMT3B-201ENST00000201963 FAM19A5Q7Z5A7 132 aaPredicted RBP8.4□□□□□ -1.06
DNMT3B-201ENST00000201963 PKIGQ9Y2B9 76 aa8.4□□□□□ -1.06
DNMT3B-201ENST00000201963 LRBAP50851 2863 aa8.4□□□□□ -1.06
DNMT3B-201ENST00000201963 HRCT1Q6UXD1 115 aa8.4□□□□□ -1.06
DNMT3B-201ENST00000201963 C16orf74Q96GX8 76 aa8.4□□□□□ -1.07
DNMT3B-201ENST00000201963 HIVEP1P15822 2718 aa8.39□□□□□ -1.07
DNMT3B-201ENST00000201963 CXCL5P42830 114 aa8.39□□□□□ -1.07
DNMT3B-201ENST00000201963 FHL3Q13643 280 aa8.39□□□□□ -1.07
DNMT3B-201ENST00000201963 LINC00242Q5T6M2 205 aa8.39□□□□□ -1.07
DNMT3B-201ENST00000201963 NREPQ16612 68 aa8.38□□□□□ -1.07
DNMT3B-201ENST00000201963 OXLD1Q5BKU9 147 aa8.38□□□□□ -1.07
DNMT3B-201ENST00000201963 NKAPP1Q8N9T2 125 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms