RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 FGF6P10767 208 aa12.2□□□□□ -0.46
PHGDH-232ENST00000641947 C11orf86A6NJI1 115 aa12.2□□□□□ -0.46
PHGDH-232ENST00000641947 LINC00587B1AMM8 73 aa12.2□□□□□ -0.46
PHGDH-232ENST00000641947 MRPL52Q86TS9 123 aaKnown RBP12.2□□□□□ -0.46
PHGDH-232ENST00000641947 C14orf144Q96I85 54 aa12.2□□□□□ -0.46
PHGDH-232ENST00000641947 TIMM21Q9BVV7 248 aa12.2□□□□□ -0.46
PHGDH-232ENST00000641947 PLNP26678 52 aa12.19□□□□□ -0.46
PHGDH-232ENST00000641947 DDTP30046 118 aa12.19□□□□□ -0.46
PHGDH-232ENST00000641947 KRTAP21-3Q3LHN1 58 aa12.19□□□□□ -0.46
PHGDH-232ENST00000641947 C11orf45Q8TAV5 145 aa12.19□□□□□ -0.46
PHGDH-232ENST00000641947 STAB2Q8WWQ8 2551 aa12.19□□□□□ -0.46
PHGDH-232ENST00000641947 HSBP1L1C9JCN9 74 aa12.18□□□□□ -0.46
PHGDH-232ENST00000641947 NPSP0C0P6 89 aa12.18□□□□□ -0.46
PHGDH-232ENST00000641947 VCX2Q9H322 139 aa12.18□□□□□ -0.46
PHGDH-232ENST00000641947 MRPS36P82909 103 aaKnown RBP12.18□□□□□ -0.46
PHGDH-232ENST00000641947 GAGE6Q13070 117 aa12.18□□□□□ -0.46
PHGDH-232ENST00000641947 IGKV2D-26A0A0A0MRZ7 120 aa12.17□□□□□ -0.46
PHGDH-232ENST00000641947 A0A0J9YXV3 536 aa12.16□□□□□ -0.46
PHGDH-232ENST00000641947 MIEN1Q9BRT3 115 aa12.16□□□□□ -0.46
PHGDH-232ENST00000641947 CSDC2Q9Y534 153 aaKnown RBP12.16□□□□□ -0.46
PHGDH-232ENST00000641947 UBE2L6O14933 153 aa12.15□□□□□ -0.46
PHGDH-232ENST00000641947 TMEM97Q5BJF2 176 aa12.15□□□□□ -0.46
PHGDH-232ENST00000641947 CHCHD5Q9BSY4 110 aa12.15□□□□□ -0.46
PHGDH-232ENST00000641947 ICOSQ9Y6W8 199 aa12.15□□□□□ -0.46
PHGDH-232ENST00000641947 MRPL23Q16540 153 aaKnown RBP12.15□□□□□ -0.46
PHGDH-232ENST00000641947 PAPPA-AS1Q5QFB9 102 aa12.15□□□□□ -0.46
PHGDH-232ENST00000641947 NFE4Q86UQ8 179 aa12.15□□□□□ -0.46
PHGDH-232ENST00000641947 B9D2Q9BPU9 175 aa12.15□□□□□ -0.46
PHGDH-232ENST00000641947 CDC42SE2Q9NRR3 84 aa12.15□□□□□ -0.46
PHGDH-232ENST00000641947 DYNC2H1Q8NCM8 4307 aaKnown RBP12.15□□□□□ -0.47
PHGDH-232ENST00000641947 IGLV4-60A0A075B6I1 120 aa12.14□□□□□ -0.47
PHGDH-232ENST00000641947 H7C423 109 aa12.14□□□□□ -0.47
PHGDH-232ENST00000641947 DGAT2L7PQ6IED9 249 aa12.14□□□□□ -0.47
PHGDH-232ENST00000641947 CHAC1Q9BUX1 264 aa12.14□□□□□ -0.47
PHGDH-232ENST00000641947 DEFB131BA0A096LNP1 70 aa12.13□□□□□ -0.47
PHGDH-232ENST00000641947 DNAH7Q8WXX0 4024 aa12.13□□□□□ -0.47
PHGDH-232ENST00000641947 AMMECR1LQ6DCA0 310 aa12.13□□□□□ -0.47
PHGDH-232ENST00000641947 OR5A1Q8NGJ0 315 aa12.13□□□□□ -0.47
PHGDH-232ENST00000641947 TTTY13Q9BZ97 58 aa12.13□□□□□ -0.47
PHGDH-232ENST00000641947 UQCR10Q9UDW1 63 aa12.13□□□□□ -0.47
PHGDH-232ENST00000641947 COX8AP10176 69 aa12.12□□□□□ -0.47
PHGDH-232ENST00000641947 UBE2D1P51668 147 aa12.12□□□□□ -0.47
PHGDH-232ENST00000641947 PCP2Q8IVA1 136 aa12.12□□□□□ -0.47
PHGDH-232ENST00000641947 CSMD3Q7Z407 3707 aa12.11□□□□□ -0.47
PHGDH-232ENST00000641947 H3BNG1 76 aa12.11□□□□□ -0.47
PHGDH-232ENST00000641947 ZNF22P17026 224 aaPredicted RBP12.11□□□□□ -0.47
PHGDH-232ENST00000641947 NMUP48645 174 aa12.11□□□□□ -0.47
PHGDH-232ENST00000641947 Q8N3U1 123 aa12.11□□□□□ -0.47
PHGDH-232ENST00000641947 ZNF25P17030 456 aaPredicted RBP12.1□□□□□ -0.47
PHGDH-232ENST00000641947 MPV17L2Q567V2 206 aa12.1□□□□□ -0.47
PHGDH-232ENST00000641947 C2orf88Q9BSF0 95 aa12.1□□□□□ -0.47
PHGDH-232ENST00000641947 TMEM170BQ5T4T1 132 aa12.09□□□□□ -0.47
PHGDH-232ENST00000641947 LYPD5Q6UWN5 251 aa12.09□□□□□ -0.47
PHGDH-232ENST00000641947 TMEM101Q96IK0 257 aa12.09□□□□□ -0.47
PHGDH-232ENST00000641947 SLC25A34Q6PIV7 304 aa12.08□□□□□ -0.48
PHGDH-232ENST00000641947 SH2D6Q7Z4S9 175 aa12.08□□□□□ -0.48
PHGDH-232ENST00000641947 LYSTQ99698 3801 aa12.08□□□□□ -0.48
PHGDH-232ENST00000641947 TINCRA0A1B0GVN0 87 aa12.07□□□□□ -0.48
PHGDH-232ENST00000641947 RBX1P62877 108 aa12.07□□□□□ -0.48
PHGDH-232ENST00000641947 COX6A2Q02221 97 aa12.07□□□□□ -0.48
PHGDH-232ENST00000641947 SMAGPQ0VAQ4 97 aa12.07□□□□□ -0.48
PHGDH-232ENST00000641947 BOD1L2Q8IYS8 172 aa12.07□□□□□ -0.48
PHGDH-232ENST00000641947 TRAV13-1A0A0B4J241 112 aa12.07□□□□□ -0.48
PHGDH-232ENST00000641947 E9PLD3 99 aa12.07□□□□□ -0.48
PHGDH-232ENST00000641947 LINC00242Q5T6M2 205 aa12.07□□□□□ -0.48
PHGDH-232ENST00000641947 LELP1Q5T871 98 aa12.07□□□□□ -0.48
PHGDH-232ENST00000641947 TRAV10A0A0B4J240 114 aa12.06□□□□□ -0.48
PHGDH-232ENST00000641947 TMEM223A0PJW6 202 aa12.06□□□□□ -0.48
PHGDH-232ENST00000641947 TMEM262E9PQX1 116 aa12.06□□□□□ -0.48
PHGDH-232ENST00000641947 C2orf91Q6ZV80 131 aa12.06□□□□□ -0.48
PHGDH-232ENST00000641947 FAM19A3Q7Z5A8 133 aa12.06□□□□□ -0.48
PHGDH-232ENST00000641947 MAPKAPK5-AS1Q8N8E1 139 aa12.06□□□□□ -0.48
PHGDH-232ENST00000641947 A0A1B0GUV1 79 aa12.05□□□□□ -0.48
PHGDH-232ENST00000641947 HNRNPA3P51991 378 aaKnown RBP12.05□□□□□ -0.48
PHGDH-232ENST00000641947 TSPEAR-AS2P59090 65 aa12.05□□□□□ -0.48
PHGDH-232ENST00000641947 DEFA6Q01524 100 aa12.05□□□□□ -0.48
PHGDH-232ENST00000641947 IGLV5-45A0A087WSX0 123 aa12.04□□□□□ -0.48
PHGDH-232ENST00000641947 TRAV8-6A0A0B4J262 113 aa12.04□□□□□ -0.48
PHGDH-232ENST00000641947 PLECQ15149 4684 aaKnown RBP12.04□□□□□ -0.48
PHGDH-232ENST00000641947 IGHV3-64A0A075B6Q5 118 aa12.03□□□□□ -0.48
PHGDH-232ENST00000641947 IGKV3OR2-268A0A0C4DH90 116 aa12.03□□□□□ -0.48
PHGDH-232ENST00000641947 TIRAPP58753 221 aa12.03□□□□□ -0.48
PHGDH-232ENST00000641947 ESRGQ1W209 222 aa12.03□□□□□ -0.48
PHGDH-232ENST00000641947 CDKN2A-AS1Q9UH64 79 aa12.03□□□□□ -0.48
PHGDH-232ENST00000641947 DLEU1O43261 78 aa12.02□□□□□ -0.48
PHGDH-232ENST00000641947 LINC00469Q8N7U9 141 aa12.02□□□□□ -0.48
PHGDH-232ENST00000641947 TRAV8-3A0A0A6YYJ7 113 aa12.02□□□□□ -0.49
PHGDH-232ENST00000641947 CLPSL2Q6UWE3 100 aa12.02□□□□□ -0.49
PHGDH-232ENST00000641947 GEMIN7Q9H840 131 aaKnown RBP12.02□□□□□ -0.49
PHGDH-232ENST00000641947 STARD9Q9P2P6 4700 aa12.02□□□□□ -0.49
PHGDH-232ENST00000641947 HERVK_113P61574 105 aa12.01□□□□□ -0.49
PHGDH-232ENST00000641947 SPINK8P0C7L1 97 aa12□□□□□ -0.49
PHGDH-232ENST00000641947 WFDC10BQ8IUB3 73 aa12□□□□□ -0.49
PHGDH-232ENST00000641947 MRPS16Q9Y3D3 137 aaKnown RBP12□□□□□ -0.49
PHGDH-232ENST00000641947 EREGO14944 169 aa12□□□□□ -0.49
PHGDH-232ENST00000641947 LINC00959A0A1B0GUT2 108 aa11.99□□□□□ -0.49
PHGDH-232ENST00000641947 HERVK_113P63121 156 aa11.99□□□□□ -0.49
PHGDH-232ENST00000641947 LINC00269Q8N2A0 174 aa11.99□□□□□ -0.49
PHGDH-232ENST00000641947 DNAH1Q9P2D7 4330 aa11.99□□□□□ -0.49
PHGDH-232ENST00000641947 LEPROTO15243 131 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms