RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 PMCHL1Q16048 86 aa6.43□□□□□ -1.38
PHGDH-228ENST00000641847 C21orf62-AS1Q17RA5 79 aa6.43□□□□□ -1.38
PHGDH-228ENST00000641847 COA6Q5JTJ3 125 aaKnown RBP6.43□□□□□ -1.38
PHGDH-228ENST00000641847 TRAV8-6A0A0B4J262 113 aa6.42□□□□□ -1.38
PHGDH-228ENST00000641847 UBE2L6O14933 153 aa6.42□□□□□ -1.38
PHGDH-228ENST00000641847 NUPR1O60356 82 aa6.42□□□□□ -1.38
PHGDH-228ENST00000641847 INAFM2P0DMQ5 153 aa6.42□□□□□ -1.38
PHGDH-228ENST00000641847 BTF3P20290 206 aaKnown RBP6.42□□□□□ -1.38
PHGDH-228ENST00000641847 GAGE6Q13070 117 aa6.42□□□□□ -1.38
PHGDH-228ENST00000641847 Q6ZR54 194 aa6.42□□□□□ -1.38
PHGDH-228ENST00000641847 C20orf203Q8NBC4 194 aa6.42□□□□□ -1.38
PHGDH-228ENST00000641847 CHCHD5Q9BSY4 110 aa6.42□□□□□ -1.38
PHGDH-228ENST00000641847 MRPS16Q9Y3D3 137 aaKnown RBP6.42□□□□□ -1.38
PHGDH-228ENST00000641847 LINC00588Q9Y4M8 146 aa6.42□□□□□ -1.38
PHGDH-228ENST00000641847 A0A096LNJ9 63 aa6.41□□□□□ -1.38
PHGDH-228ENST00000641847 HBDP02042 147 aa6.41□□□□□ -1.38
PHGDH-228ENST00000641847 RPL39P62891 51 aaKnown RBP6.41□□□□□ -1.38
PHGDH-228ENST00000641847 TNP2Q05952 138 aa6.41□□□□□ -1.38
PHGDH-228ENST00000641847 PDZD11Q5EBL8 140 aa6.41□□□□□ -1.38
PHGDH-228ENST00000641847 C2orf66Q6UXQ4 117 aa6.41□□□□□ -1.38
PHGDH-228ENST00000641847 FAM19A2Q8N3H0 131 aa6.41□□□□□ -1.38
PHGDH-228ENST00000641847 TMEM18Q96B42 140 aa6.41□□□□□ -1.38
PHGDH-228ENST00000641847 CYSLTR1Q9Y271 337 aa6.41□□□□□ -1.38
PHGDH-228ENST00000641847 H7C423 109 aa6.4□□□□□ -1.38
PHGDH-228ENST00000641847 G0S2P27469 103 aa6.4□□□□□ -1.38
PHGDH-228ENST00000641847 AMMECR1LQ6DCA0 310 aa6.4□□□□□ -1.38
PHGDH-228ENST00000641847 WFDC10BQ8IUB3 73 aa6.4□□□□□ -1.38
PHGDH-228ENST00000641847 TOMM6Q96B49 74 aa6.4□□□□□ -1.38
PHGDH-228ENST00000641847 TMEM262E9PQX1 116 aa6.39□□□□□ -1.39
PHGDH-228ENST00000641847 FGF6P10767 208 aa6.39□□□□□ -1.39
PHGDH-228ENST00000641847 PKIAP61925 76 aa6.39□□□□□ -1.39
PHGDH-228ENST00000641847 SNRPEP62304 92 aaKnown RBP6.39□□□□□ -1.39
PHGDH-228ENST00000641847 UPK3BQ9BT76 320 aa6.39□□□□□ -1.39
PHGDH-228ENST00000641847 UBE2D4Q9Y2X8 147 aa6.39□□□□□ -1.39
PHGDH-228ENST00000641847 SMAGPQ0VAQ4 97 aa6.38□□□□□ -1.39
PHGDH-228ENST00000641847 MPV17L2Q567V2 206 aa6.38□□□□□ -1.39
PHGDH-228ENST00000641847 MRPL52Q86TS9 123 aaKnown RBP6.38□□□□□ -1.39
PHGDH-228ENST00000641847 HIST3H2BBQ8N257 126 aa6.38□□□□□ -1.39
PHGDH-228ENST00000641847 Q8N3U1 123 aa6.38□□□□□ -1.39
PHGDH-228ENST00000641847 TMEM101Q96IK0 257 aa6.38□□□□□ -1.39
PHGDH-228ENST00000641847 SPANXA1Q9NS26 97 aa6.38□□□□□ -1.39
PHGDH-228ENST00000641847 VPS13BQ7Z7G8 4022 aa6.37□□□□□ -1.39
PHGDH-228ENST00000641847 A0A087WX48 190 aa6.37□□□□□ -1.39
PHGDH-228ENST00000641847 C5orf52A6NGY3 159 aa6.37□□□□□ -1.39
PHGDH-228ENST00000641847 LINC01549A6NIU2 74 aa6.37□□□□□ -1.39
PHGDH-228ENST00000641847 SIVA1O15304 175 aa6.37□□□□□ -1.39
PHGDH-228ENST00000641847 LEPROTL1O95214 131 aa6.37□□□□□ -1.39
PHGDH-228ENST00000641847 IGHV3-30P01768 117 aa6.37□□□□□ -1.39
PHGDH-228ENST00000641847 IGHV3-33P01772 117 aa6.37□□□□□ -1.39
PHGDH-228ENST00000641847 IGHV3-30-3P0DP02 117 aa6.37□□□□□ -1.39
PHGDH-228ENST00000641847 IGHV3-30-5P0DP03 117 aa6.37□□□□□ -1.39
PHGDH-228ENST00000641847 ZNF25P17030 456 aaPredicted RBP6.37□□□□□ -1.39
PHGDH-228ENST00000641847 S100A2P29034 98 aa6.37□□□□□ -1.39
PHGDH-228ENST00000641847 RBX1P62877 108 aa6.37□□□□□ -1.39
PHGDH-228ENST00000641847 Q6ZUT4 128 aa6.37□□□□□ -1.39
PHGDH-228ENST00000641847 Q8N976 141 aa6.37□□□□□ -1.39
PHGDH-228ENST00000641847 OR5A1Q8NGJ0 315 aa6.37□□□□□ -1.39
PHGDH-228ENST00000641847 SCGB3A1Q96QR1 104 aa6.37□□□□□ -1.39
PHGDH-228ENST00000641847 TIMM17AQ99595 171 aa6.37□□□□□ -1.39
PHGDH-228ENST00000641847 TIMM21Q9BVV7 248 aa6.37□□□□□ -1.39
PHGDH-228ENST00000641847 PYGO1Q9Y3Y4 419 aa6.37□□□□□ -1.39
PHGDH-228ENST00000641847 IGLV4-60A0A075B6I1 120 aa6.36□□□□□ -1.39
PHGDH-228ENST00000641847 IGLV4-3A0A075B6K6 122 aa6.36□□□□□ -1.39
PHGDH-228ENST00000641847 IGIPA6NJ69 53 aa6.36□□□□□ -1.39
PHGDH-228ENST00000641847 ATP5LO75964 103 aa6.36□□□□□ -1.39
PHGDH-228ENST00000641847 DNAH10OSP0CZ25 163 aa6.36□□□□□ -1.39
PHGDH-228ENST00000641847 FABP4P15090 132 aa6.36□□□□□ -1.39
PHGDH-228ENST00000641847 LINC01556Q5JQF7 62 aa6.36□□□□□ -1.39
PHGDH-228ENST00000641847 DGAT2L7PQ6IED9 249 aa6.36□□□□□ -1.39
PHGDH-228ENST00000641847 LINC00173Q6ZV60 143 aa6.36□□□□□ -1.39
PHGDH-228ENST00000641847 ERASQ7Z444 233 aa6.36□□□□□ -1.39
PHGDH-228ENST00000641847 SPATA12Q7Z6I5 190 aa6.36□□□□□ -1.39
PHGDH-228ENST00000641847 C6orf223Q8N319 242 aa6.36□□□□□ -1.39
PHGDH-228ENST00000641847 TMEM141Q96I45 108 aa6.36□□□□□ -1.39
PHGDH-228ENST00000641847 HSPB8Q9UJY1 196 aa6.36□□□□□ -1.39
PHGDH-228ENST00000641847 A0A1B0GUV1 79 aa6.35□□□□□ -1.39
PHGDH-228ENST00000641847 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.35□□□□□ -1.39
PHGDH-228ENST00000641847 GHRHP01286 108 aa6.35□□□□□ -1.39
PHGDH-228ENST00000641847 NPSP0C0P6 89 aa6.35□□□□□ -1.39
PHGDH-228ENST00000641847 RNASE13Q5GAN3 156 aaKnown RBP6.35□□□□□ -1.39
PHGDH-228ENST00000641847 Q6ZN92 141 aa6.35□□□□□ -1.39
PHGDH-228ENST00000641847 IFI27L1Q96BM0 104 aa6.35□□□□□ -1.39
PHGDH-228ENST00000641847 PACRGQ96M98 296 aaPredicted RBP6.35□□□□□ -1.39
PHGDH-228ENST00000641847 HIST1H2BLQ99880 126 aa6.35□□□□□ -1.39
PHGDH-228ENST00000641847 OPRPNQ99935 248 aaPredicted RBP6.35□□□□□ -1.39
PHGDH-228ENST00000641847 CSDC2Q9Y534 153 aaKnown RBP6.35□□□□□ -1.39
PHGDH-228ENST00000641847 FAT1Q14517 4588 aa6.35□□□□□ -1.39
PHGDH-228ENST00000641847 IFITM10A6NMD0 228 aa6.34□□□□□ -1.39
PHGDH-228ENST00000641847 ANGP03950 147 aaKnown RBP6.34□□□□□ -1.39
PHGDH-228ENST00000641847 MRPS36P82909 103 aaKnown RBP6.34□□□□□ -1.39
PHGDH-228ENST00000641847 CLPSL2Q6UWE3 100 aa6.34□□□□□ -1.39
PHGDH-228ENST00000641847 ZNF664Q8N3J9 261 aa6.34□□□□□ -1.39
PHGDH-228ENST00000641847 BAALCQ8WXS3 180 aa6.34□□□□□ -1.39
PHGDH-228ENST00000641847 FAM104AQ969W3 186 aa6.34□□□□□ -1.39
PHGDH-228ENST00000641847 Q9H8V8 135 aa6.34□□□□□ -1.39
PHGDH-228ENST00000641847 CDC42SE2Q9NRR3 84 aa6.34□□□□□ -1.39
PHGDH-228ENST00000641847 IGKV3OR2-268A0A0C4DH90 116 aa6.33□□□□□ -1.4
PHGDH-228ENST00000641847 PAPPA-AS1Q5QFB9 102 aa6.33□□□□□ -1.4
PHGDH-228ENST00000641847 ZC2HC1BQ5TFG8 222 aa6.33□□□□□ -1.4
PHGDH-228ENST00000641847 TEX43Q6ZNM6 134 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms