RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 AKAP9Q99996 3911 aa10.59□□□□□ -0.71
SCARB2-221ENST00000640341 TMEM89A2RUT3 159 aa10.58□□□□□ -0.72
SCARB2-221ENST00000640341 ATXN8Q156A1 80 aa10.58□□□□□ -0.72
SCARB2-221ENST00000640341 LINC01620Q4KN68 170 aa10.58□□□□□ -0.72
SCARB2-221ENST00000640341 VSIG2Q96IQ7 327 aa10.58□□□□□ -0.72
SCARB2-221ENST00000640341 STHQ8IWL8 128 aa10.58□□□□□ -0.72
SCARB2-221ENST00000640341 Q96MF0 132 aa10.58□□□□□ -0.72
SCARB2-221ENST00000640341 A0A0B4J2C4 111 aa10.58□□□□□ -0.72
SCARB2-221ENST00000640341 INSP01308 110 aa10.58□□□□□ -0.72
SCARB2-221ENST00000640341 J3QLI3 93 aa10.57□□□□□ -0.72
SCARB2-221ENST00000640341 COX6A2Q02221 97 aa10.56□□□□□ -0.72
SCARB2-221ENST00000640341 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.56□□□□□ -0.72
SCARB2-221ENST00000640341 PYGO1Q9Y3Y4 419 aa10.56□□□□□ -0.72
SCARB2-221ENST00000640341 APCP25054 2843 aa10.56□□□□□ -0.72
SCARB2-221ENST00000640341 ITPR2Q14571 2701 aa10.56□□□□□ -0.72
SCARB2-221ENST00000640341 NBEAL2Q6ZNJ1 2754 aa10.56□□□□□ -0.72
SCARB2-221ENST00000640341 GAGE12JA6NER3 117 aa10.56□□□□□ -0.72
SCARB2-221ENST00000640341 GAGE4Q13068 117 aa10.56□□□□□ -0.72
SCARB2-221ENST00000640341 GAGE5Q13069 117 aa10.56□□□□□ -0.72
SCARB2-221ENST00000640341 C2orf82Q6UX34 121 aa10.56□□□□□ -0.72
SCARB2-221ENST00000640341 A0A096LNT2 108 aa10.56□□□□□ -0.72
SCARB2-221ENST00000640341 LINC00694P0DN24 101 aa10.56□□□□□ -0.72
SCARB2-221ENST00000640341 RPL13AP40429 203 aaKnown RBP10.56□□□□□ -0.72
SCARB2-221ENST00000640341 LITAFQ99732 161 aa10.56□□□□□ -0.72
SCARB2-221ENST00000640341 Q9H8V8 135 aa10.56□□□□□ -0.72
SCARB2-221ENST00000640341 ICOSQ9Y6W8 199 aa10.56□□□□□ -0.72
SCARB2-221ENST00000640341 SETXQ7Z333 2677 aaKnown RBP10.55□□□□□ -0.72
SCARB2-221ENST00000640341 DEFB114Q30KQ6 69 aa10.55□□□□□ -0.72
SCARB2-221ENST00000640341 COX6CP09669 75 aa10.55□□□□□ -0.72
SCARB2-221ENST00000640341 Q6ZTI0 123 aa10.55□□□□□ -0.72
SCARB2-221ENST00000640341 MEIG1Q5JSS6 88 aa10.54□□□□□ -0.72
SCARB2-221ENST00000640341 SPANXA1Q9NS26 97 aa10.54□□□□□ -0.72
SCARB2-221ENST00000640341 HIVEP2P31629 2446 aa10.54□□□□□ -0.72
SCARB2-221ENST00000640341 TINCRA0A1B0GVN0 87 aa10.54□□□□□ -0.72
SCARB2-221ENST00000640341 C11orf72Q8NBR9 251 aa10.54□□□□□ -0.72
SCARB2-221ENST00000640341 WFDC10AQ9H1F0 79 aa10.54□□□□□ -0.72
SCARB2-221ENST00000640341 MIAQ16674 131 aa10.54□□□□□ -0.72
SCARB2-221ENST00000640341 TMEM101Q96IK0 257 aa10.54□□□□□ -0.72
SCARB2-221ENST00000640341 NBPF19A0A087WUL8 3843 aa10.53□□□□□ -0.72
SCARB2-221ENST00000640341 ODF3L2Q3SX64 289 aa10.52□□□□□ -0.72
SCARB2-221ENST00000640341 NOP10Q9NPE3 64 aaKnown RBP10.52□□□□□ -0.72
SCARB2-221ENST00000640341 RPL35AP18077 110 aaKnown RBP10.52□□□□□ -0.73
SCARB2-221ENST00000640341 SNCGO76070 127 aa10.51□□□□□ -0.73
SCARB2-221ENST00000640341 PLA2G2AP14555 144 aa10.51□□□□□ -0.73
SCARB2-221ENST00000640341 TEX29Q8N6K0 151 aa10.51□□□□□ -0.73
SCARB2-221ENST00000640341 ANAPC13Q9BS18 74 aa10.51□□□□□ -0.73
SCARB2-221ENST00000640341 TOMM7Q9P0U1 55 aa10.51□□□□□ -0.73
SCARB2-221ENST00000640341 GCN1Q92616 2671 aaKnown RBP10.51□□□□□ -0.73
SCARB2-221ENST00000640341 PRIMA1Q86XR5 153 aa10.51□□□□□ -0.73
SCARB2-221ENST00000640341 SBSPONQ8IVN8 264 aa10.51□□□□□ -0.73
SCARB2-221ENST00000640341 C4orf3Q8WVX3 66 aa10.51□□□□□ -0.73
SCARB2-221ENST00000640341 CRLF1O75462 422 aa10.51□□□□□ -0.73
SCARB2-221ENST00000640341 CIRBPQ14011 172 aaKnown RBP10.51□□□□□ -0.73
SCARB2-221ENST00000640341 TRGV2A0A075B6R0 118 aa10.5□□□□□ -0.73
SCARB2-221ENST00000640341 UBE2WQ96B02 151 aa10.5□□□□□ -0.73
SCARB2-221ENST00000640341 RNF183Q96D59 192 aa10.5□□□□□ -0.73
SCARB2-221ENST00000640341 TRAV8-4A0A0B4J246 113 aa10.5□□□□□ -0.73
SCARB2-221ENST00000640341 TMEM262E9PQX1 116 aa10.5□□□□□ -0.73
SCARB2-221ENST00000640341 GAGE7O76087 117 aa10.5□□□□□ -0.73
SCARB2-221ENST00000640341 GAGE12FP0CL80 117 aa10.5□□□□□ -0.73
SCARB2-221ENST00000640341 GAGE12GP0CL81 117 aa10.5□□□□□ -0.73
SCARB2-221ENST00000640341 GAGE12IP0CL82 117 aa10.5□□□□□ -0.73
SCARB2-221ENST00000640341 RPL36AP83881 106 aaKnown RBP10.5□□□□□ -0.73
SCARB2-221ENST00000640341 ZFAND6Q6FIF0 208 aa10.5□□□□□ -0.73
SCARB2-221ENST00000640341 RPL36ALQ969Q0 106 aaKnown RBP10.5□□□□□ -0.73
SCARB2-221ENST00000640341 TRAV4A0A0B4J268 109 aa10.49□□□□□ -0.73
SCARB2-221ENST00000640341 C1orf158Q8N1D5 194 aa10.49□□□□□ -0.73
SCARB2-221ENST00000640341 TRBV30A0A0K0K1B3 111 aa10.49□□□□□ -0.73
SCARB2-221ENST00000640341 TRBV10-2A0A0K0K1G8 114 aa10.49□□□□□ -0.73
SCARB2-221ENST00000640341 LOC100131303A0A0U1RQF7 123 aa10.49□□□□□ -0.73
SCARB2-221ENST00000640341 H7C423 109 aa10.49□□□□□ -0.73
SCARB2-221ENST00000640341 TENM4Q6N022 2769 aa10.48□□□□□ -0.73
SCARB2-221ENST00000640341 DEFB113Q30KQ7 82 aa10.48□□□□□ -0.73
SCARB2-221ENST00000640341 TTC32Q5I0X7 151 aa10.48□□□□□ -0.73
SCARB2-221ENST00000640341 LINC00242Q5T6M2 205 aa10.48□□□□□ -0.73
SCARB2-221ENST00000640341 UBE2L6O14933 153 aa10.48□□□□□ -0.73
SCARB2-221ENST00000640341 SS18L2Q9UHA2 77 aa10.48□□□□□ -0.73
SCARB2-221ENST00000640341 SPANXDQ9BXN6 97 aa10.47□□□□□ -0.73
SCARB2-221ENST00000640341 SPANXCQ9NY87 97 aa10.47□□□□□ -0.73
SCARB2-221ENST00000640341 RS1O15537 224 aa10.47□□□□□ -0.73
SCARB2-221ENST00000640341 GAGE2BQ13066 116 aa10.47□□□□□ -0.73
SCARB2-221ENST00000640341 GAGE2EQ4V326 116 aa10.47□□□□□ -0.73
SCARB2-221ENST00000640341 PIK3CD-AS1Q5SR53 167 aa10.47□□□□□ -0.73
SCARB2-221ENST00000640341 YAE1D1Q9NRH1 226 aa10.47□□□□□ -0.73
SCARB2-221ENST00000640341 GAGE2DQ9UEU5 116 aa10.47□□□□□ -0.73
SCARB2-221ENST00000640341 CR1P17927 2039 aa10.47□□□□□ -0.73
SCARB2-221ENST00000640341 CCL24O00175 119 aa10.46□□□□□ -0.73
SCARB2-221ENST00000640341 RNF152Q8N8N0 203 aa10.46□□□□□ -0.73
SCARB2-221ENST00000640341 NTM-AS1Q6ZSK4 140 aa10.46□□□□□ -0.73
SCARB2-221ENST00000640341 WFDC11Q8NEX6 87 aa10.46□□□□□ -0.73
SCARB2-221ENST00000640341 CITED2Q99967 270 aaPredicted RBP10.46□□□□□ -0.73
SCARB2-221ENST00000640341 FSHBP01225 129 aa10.46□□□□□ -0.74
SCARB2-221ENST00000640341 HERVK_113P63121 156 aa10.45□□□□□ -0.74
SCARB2-221ENST00000640341 C15orf53Q8NAA6 179 aa10.45□□□□□ -0.74
SCARB2-221ENST00000640341 LINC00308Q8TCZ7 52 aa10.45□□□□□ -0.74
SCARB2-221ENST00000640341 DNAJC30Q96LL9 226 aa10.45□□□□□ -0.74
SCARB2-221ENST00000640341 K7EQD1 137 aa10.45□□□□□ -0.74
SCARB2-221ENST00000640341 B5MCH6 92 aa10.45□□□□□ -0.74
SCARB2-221ENST00000640341 C11orf68Q9H3H3 251 aaKnown RBP10.45□□□□□ -0.74
SCARB2-221ENST00000640341 GAGE6Q13070 117 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms