RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	CT83	Q5H943	113 aa		9.25	□□□□□ -0.93
TARDBP-231	ENST00000639599	REG3G	Q6UW15	175 aa		9.25	□□□□□ -0.93
TARDBP-231	ENST00000639599	FAM231D	Q6ZW35	169 aa		9.25	□□□□□ -0.93
TARDBP-231	ENST00000639599	FAT3	Q8TDW7	4589 aa		9.24	□□□□□ -0.93
TARDBP-231	ENST00000639599	TRBV6-5	A0A0K0K1A5	114 aa		9.24	□□□□□ -0.93
TARDBP-231	ENST00000639599		A0A1B0GUT8	65 aa		9.24	□□□□□ -0.93
TARDBP-231	ENST00000639599	SYCN	Q0VAF6	134 aa		9.23	□□□□□ -0.93
TARDBP-231	ENST00000639599	CD164L2	Q6UWJ8	174 aa		9.23	□□□□□ -0.93
TARDBP-231	ENST00000639599	EIF5A2	Q9GZV4	153 aa	Known RBP	9.23	□□□□□ -0.93
TARDBP-231	ENST00000639599	HIGD1C	A8MV81	97 aa		9.22	□□□□□ -0.93
TARDBP-231	ENST00000639599	TSHB	P01222	138 aa		9.22	□□□□□ -0.93
TARDBP-231	ENST00000639599	CAMP	P49913	170 aa		9.22	□□□□□ -0.93
TARDBP-231	ENST00000639599	ALKAL2	Q6UX46	152 aa		9.22	□□□□□ -0.93
TARDBP-231	ENST00000639599	LINC00526	Q96FQ7	95 aa		9.22	□□□□□ -0.93
TARDBP-231	ENST00000639599	SMIM7	Q9BQ49	75 aa		9.22	□□□□□ -0.93
TARDBP-231	ENST00000639599	TMEM191A	Q9H0A3	160 aa		9.22	□□□□□ -0.93
TARDBP-231	ENST00000639599	PPP1R17	O96001	155 aa		9.21	□□□□□ -0.94
TARDBP-231	ENST00000639599	GAGE2B	Q13066	116 aa		9.21	□□□□□ -0.94
TARDBP-231	ENST00000639599	SPINK6	Q6UWN8	80 aa		9.21	□□□□□ -0.94
TARDBP-231	ENST00000639599		Q6ZRP5	223 aa		9.21	□□□□□ -0.94
TARDBP-231	ENST00000639599	ZNF664	Q8N3J9	261 aa		9.21	□□□□□ -0.94
TARDBP-231	ENST00000639599	TSKU	Q8WUA8	353 aa		9.21	□□□□□ -0.94
TARDBP-231	ENST00000639599	LINC01600	Q96MT4	127 aa		9.21	□□□□□ -0.94
TARDBP-231	ENST00000639599	KIR2DL4	Q99706	377 aa		9.21	□□□□□ -0.94
TARDBP-231	ENST00000639599	LOC107984640	A0A0U1RRK4	108 aa		9.2	□□□□□ -0.94
TARDBP-231	ENST00000639599	FAM231B	A6NCW3	169 aa		9.2	□□□□□ -0.94
TARDBP-231	ENST00000639599	C1orf196	B1AJZ1	125 aa		9.2	□□□□□ -0.94
TARDBP-231	ENST00000639599	COX7A2L	O14548	114 aa		9.2	□□□□□ -0.94
TARDBP-231	ENST00000639599	VCY	O14598	125 aa		9.2	□□□□□ -0.94
TARDBP-231	ENST00000639599	ESD	P10768	282 aa		9.2	□□□□□ -0.94
TARDBP-231	ENST00000639599	RIG	Q13278	110 aa		9.2	□□□□□ -0.94
TARDBP-231	ENST00000639599	MRPL52	Q86TS9	123 aa	Known RBP	9.2	□□□□□ -0.94
TARDBP-231	ENST00000639599	AKAP14	Q86UN6	197 aa		9.2	□□□□□ -0.94
TARDBP-231	ENST00000639599	TMEM18	Q96B42	140 aa		9.2	□□□□□ -0.94
TARDBP-231	ENST00000639599	CDC42SE2	Q9NRR3	84 aa		9.2	□□□□□ -0.94
TARDBP-231	ENST00000639599	ZNF727	A8MUV8	499 aa		9.19	□□□□□ -0.94
TARDBP-231	ENST00000639599	APOM	O95445	188 aa		9.19	□□□□□ -0.94
TARDBP-231	ENST00000639599	AMN1	Q8IY45	258 aa		9.19	□□□□□ -0.94
TARDBP-231	ENST00000639599	CAMK2N2	Q96S95	79 aa		9.19	□□□□□ -0.94
TARDBP-231	ENST00000639599	PKHD1L1	Q86WI1	4243 aa		9.19	□□□□□ -0.94
TARDBP-231	ENST00000639599	TRBV27	A0A0K0K1C4	114 aa		9.18	□□□□□ -0.94
TARDBP-231	ENST00000639599	RAB4A	P20338	218 aa		9.18	□□□□□ -0.94
TARDBP-231	ENST00000639599	UBR4	Q5T4S7	5183 aa		9.18	□□□□□ -0.94
TARDBP-231	ENST00000639599	IGLV4-69	A0A075B6H9	119 aa		9.17	□□□□□ -0.94
TARDBP-231	ENST00000639599	TRAV13-1	A0A0B4J241	112 aa		9.17	□□□□□ -0.94
TARDBP-231	ENST00000639599	PPP1R2P9	O14990	202 aa		9.17	□□□□□ -0.94
TARDBP-231	ENST00000639599	PTTG1IP	P53801	180 aa		9.17	□□□□□ -0.94
TARDBP-231	ENST00000639599	RPL18A	Q02543	176 aa	Known RBP	9.17	□□□□□ -0.94
TARDBP-231	ENST00000639599	LINC01551	Q86U37	167 aa		9.17	□□□□□ -0.94
TARDBP-231	ENST00000639599	OSTC	Q9NRP0	149 aa		9.17	□□□□□ -0.94
TARDBP-231	ENST00000639599		A0A0J9YXV3	536 aa		9.16	□□□□□ -0.94
TARDBP-231	ENST00000639599	SMKR1	H3BMG3	65 aa		9.16	□□□□□ -0.94
TARDBP-231	ENST00000639599	GAS8-AS1	O95177	125 aa		9.16	□□□□□ -0.94
TARDBP-231	ENST00000639599	POLR2K	P53803	58 aa	Known RBP	9.16	□□□□□ -0.94
TARDBP-231	ENST00000639599	SUMO2	P61956	95 aa	Known RBP	9.16	□□□□□ -0.94
TARDBP-231	ENST00000639599	MT-ND6	P03923	174 aa		9.15	□□□□□ -0.94
TARDBP-231	ENST00000639599	RNASE13	Q5GAN3	156 aa	Known RBP	9.15	□□□□□ -0.94
TARDBP-231	ENST00000639599	SPAG11B	Q08648	103 aa		9.14	□□□□□ -0.95
TARDBP-231	ENST00000639599	NAT8B	Q9UHF3	227 aa		9.14	□□□□□ -0.95
TARDBP-231	ENST00000639599	UBE2D4	Q9Y2X8	147 aa		9.14	□□□□□ -0.95
TARDBP-231	ENST00000639599	CSDC2	Q9Y534	153 aa	Known RBP	9.14	□□□□□ -0.95
TARDBP-231	ENST00000639599	TCAP	O15273	167 aa		9.13	□□□□□ -0.95
TARDBP-231	ENST00000639599	C5orf38	Q86SI9	138 aa		9.13	□□□□□ -0.95
TARDBP-231	ENST00000639599	NUP35	Q8NFH5	326 aa		9.13	□□□□□ -0.95
TARDBP-231	ENST00000639599	hCG_2014768	A0A024R1R8	64 aa		9.12	□□□□□ -0.95
TARDBP-231	ENST00000639599	C2orf48	Q96LS8	159 aa		9.12	□□□□□ -0.95
TARDBP-231	ENST00000639599	CKS2	P33552	79 aa		9.11	□□□□□ -0.95
TARDBP-231	ENST00000639599	ADIRF	Q15847	76 aa		9.11	□□□□□ -0.95
TARDBP-231	ENST00000639599	TMEM241	Q24JQ0	296 aa		9.11	□□□□□ -0.95
TARDBP-231	ENST00000639599		Q6ZUT4	128 aa		9.11	□□□□□ -0.95
TARDBP-231	ENST00000639599		V9GYV3	84 aa		9.11	□□□□□ -0.95
TARDBP-231	ENST00000639599	LINC00862	A6NCI5	91 aa		9.1	□□□□□ -0.95
TARDBP-231	ENST00000639599	SRP19	P09132	144 aa	Known RBP	9.1	□□□□□ -0.95
TARDBP-231	ENST00000639599	FAM74A3	Q4VXF1	159 aa		9.1	□□□□□ -0.95
TARDBP-231	ENST00000639599	C9orf116	Q5BN46	136 aa	Predicted RBP	9.1	□□□□□ -0.95
TARDBP-231	ENST00000639599	NRAC	Q8N912	160 aa		9.1	□□□□□ -0.95
TARDBP-231	ENST00000639599	OR10D4P	Q8NGN7	298 aa		9.1	□□□□□ -0.95
TARDBP-231	ENST00000639599		A0A1B0GW15	77 aa		9.09	□□□□□ -0.95
TARDBP-231	ENST00000639599	S100A8	P05109	93 aa		9.09	□□□□□ -0.95
TARDBP-231	ENST00000639599	MRPL51	Q4U2R6	128 aa	Known RBP	9.09	□□□□□ -0.95
TARDBP-231	ENST00000639599	C1orf137	Q5JT78	98 aa		9.09	□□□□□ -0.95
TARDBP-231	ENST00000639599	FAM104B	Q5XKR9	115 aa		9.09	□□□□□ -0.95
TARDBP-231	ENST00000639599	ORAOV1	Q8WV07	137 aa		9.09	□□□□□ -0.95
TARDBP-231	ENST00000639599	IMMP2L	Q96T52	175 aa		9.09	□□□□□ -0.95
TARDBP-231	ENST00000639599	C20orf78	Q9BR46	151 aa		9.09	□□□□□ -0.95
TARDBP-231	ENST00000639599	TIMM21	Q9BVV7	248 aa		9.09	□□□□□ -0.95
TARDBP-231	ENST00000639599		A0A1W2PNN7	141 aa		9.08	□□□□□ -0.96
TARDBP-231	ENST00000639599		F8W036	122 aa		9.08	□□□□□ -0.96
TARDBP-231	ENST00000639599	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	9.08	□□□□□ -0.96
TARDBP-231	ENST00000639599	NDUFA1	O15239	70 aa		9.08	□□□□□ -0.96
TARDBP-231	ENST00000639599	OPRPN	Q99935	248 aa	Predicted RBP	9.08	□□□□□ -0.96
TARDBP-231	ENST00000639599	IFITM10	A6NMD0	228 aa		9.07	□□□□□ -0.96
TARDBP-231	ENST00000639599		F8WDY8	70 aa		9.07	□□□□□ -0.96
TARDBP-231	ENST00000639599	HBB	P68871	147 aa		9.07	□□□□□ -0.96
TARDBP-231	ENST00000639599	SRSF9	Q13242	221 aa	Known RBP eCLIP	9.07	□□□□□ -0.96
TARDBP-231	ENST00000639599	ODF1	Q14990	250 aa		9.07	□□□□□ -0.96
TARDBP-231	ENST00000639599	SPANXA1	Q9NS26	97 aa		9.07	□□□□□ -0.96
TARDBP-231	ENST00000639599	NAT8	Q9UHE5	227 aa		9.07	□□□□□ -0.96
TARDBP-231	ENST00000639599	PSORS1C2	Q9UIG4	136 aa		9.07	□□□□□ -0.96
TARDBP-231	ENST00000639599	TGIF2-C20orf24	A0A0A6YYL0	155 aa		9.06	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms