RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 GCSHP23434 173 aa7.61□□□□□ -1.19
TARDBP-230ENST00000639083 MRPS36P82909 103 aaKnown RBP7.61□□□□□ -1.19
TARDBP-230ENST00000639083 TMEM223A0PJW6 202 aa7.61□□□□□ -1.19
TARDBP-230ENST00000639083 TSPEAR-AS2P59090 65 aa7.61□□□□□ -1.19
TARDBP-230ENST00000639083 MAST4O15021 2626 aa7.6□□□□□ -1.19
TARDBP-230ENST00000639083 IGHV3-64A0A075B6Q5 118 aa7.6□□□□□ -1.19
TARDBP-230ENST00000639083 IGHV4-28A0A0C4DH34 117 aa7.6□□□□□ -1.19
TARDBP-230ENST00000639083 KRTAP10-11P60412 298 aa7.6□□□□□ -1.19
TARDBP-230ENST00000639083 TIMM21Q9BVV7 248 aa7.6□□□□□ -1.19
TARDBP-230ENST00000639083 GTSF1LQ9H1H1 148 aa7.6□□□□□ -1.19
TARDBP-230ENST00000639083 CCL25O15444 150 aa7.59□□□□□ -1.19
TARDBP-230ENST00000639083 FXYD2P54710 66 aa7.59□□□□□ -1.19
TARDBP-230ENST00000639083 SHISA2Q6UWI4 295 aa7.59□□□□□ -1.19
TARDBP-230ENST00000639083 SBSPONQ8IVN8 264 aa7.59□□□□□ -1.19
TARDBP-230ENST00000639083 PLEKHB2Q96CS7 222 aa7.59□□□□□ -1.19
TARDBP-230ENST00000639083 A6NDN8 102 aa7.59□□□□□ -1.19
TARDBP-230ENST00000639083 LYRM9A8MSI8 78 aa7.59□□□□□ -1.19
TARDBP-230ENST00000639083 J3QQQ9 107 aa7.59□□□□□ -1.19
TARDBP-230ENST00000639083 SCGB1D4Q6XE38 83 aa7.59□□□□□ -1.19
TARDBP-230ENST00000639083 CEND1Q8N111 149 aa7.59□□□□□ -1.19
TARDBP-230ENST00000639083 HIST1H4GQ99525 98 aa7.59□□□□□ -1.19
TARDBP-230ENST00000639083 TINCRA0A1B0GVN0 87 aa7.58□□□□□ -1.2
TARDBP-230ENST00000639083 UBE2D1P51668 147 aa7.58□□□□□ -1.2
TARDBP-230ENST00000639083 COL6A5A8TX70 2615 aa7.58□□□□□ -1.2
TARDBP-230ENST00000639083 Q8NAQ8 132 aa7.58□□□□□ -1.2
TARDBP-230ENST00000639083 NAA38Q9BRA0 125 aaKnown RBP7.58□□□□□ -1.2
TARDBP-230ENST00000639083 TMEM243Q9BU79 118 aa7.58□□□□□ -1.2
TARDBP-230ENST00000639083 TM2D2Q9BX73 214 aa7.58□□□□□ -1.2
TARDBP-230ENST00000639083 CSDC2Q9Y534 153 aaKnown RBP7.58□□□□□ -1.2
TARDBP-230ENST00000639083 UBE2L6O14933 153 aa7.57□□□□□ -1.2
TARDBP-230ENST00000639083 LEPROTO15243 131 aa7.57□□□□□ -1.2
TARDBP-230ENST00000639083 GYPEP15421 78 aa7.57□□□□□ -1.2
TARDBP-230ENST00000639083 LGALS3P17931 250 aaKnown RBP7.57□□□□□ -1.2
TARDBP-230ENST00000639083 PTTG1IPP53801 180 aa7.57□□□□□ -1.2
TARDBP-230ENST00000639083 RNF183Q96D59 192 aa7.57□□□□□ -1.2
TARDBP-230ENST00000639083 TRBV6-8A0A0A6YYG3 113 aa7.57□□□□□ -1.2
TARDBP-230ENST00000639083 TRAV8-3A0A0A6YYJ7 113 aa7.57□□□□□ -1.2
TARDBP-230ENST00000639083 MIFP14174 115 aa7.57□□□□□ -1.2
TARDBP-230ENST00000639083 TAL2Q16559 108 aa7.57□□□□□ -1.2
TARDBP-230ENST00000639083 AMMECR1LQ6DCA0 310 aa7.57□□□□□ -1.2
TARDBP-230ENST00000639083 GEMIN7Q9H840 131 aaKnown RBP7.57□□□□□ -1.2
TARDBP-230ENST00000639083 CDC42SE2Q9NRR3 84 aa7.57□□□□□ -1.2
TARDBP-230ENST00000639083 PRO0255Q9UI72 69 aa7.57□□□□□ -1.2
TARDBP-230ENST00000639083 CELA1Q9UNI1 258 aa7.57□□□□□ -1.2
TARDBP-230ENST00000639083 OR5A1Q8NGJ0 315 aa7.56□□□□□ -1.2
TARDBP-230ENST00000639083 RAB37Q96AX2 223 aa7.56□□□□□ -1.2
TARDBP-230ENST00000639083 ANK2Q01484 3957 aa7.56□□□□□ -1.2
TARDBP-230ENST00000639083 A0A0J9YY99 117 aa7.55□□□□□ -1.2
TARDBP-230ENST00000639083 H3BRM9 83 aa7.55□□□□□ -1.2
TARDBP-230ENST00000639083 IGHV3-30-3P0DP02 117 aa7.55□□□□□ -1.2
TARDBP-230ENST00000639083 DAD1P61803 113 aa7.55□□□□□ -1.2
TARDBP-230ENST00000639083 COX6A2Q02221 97 aa7.55□□□□□ -1.2
TARDBP-230ENST00000639083 CDKN2A-AS1Q9UH64 79 aa7.55□□□□□ -1.2
TARDBP-230ENST00000639083 CMYA5Q8N3K9 4069 aa7.55□□□□□ -1.2
TARDBP-230ENST00000639083 TRAV13-1A0A0B4J241 112 aa7.55□□□□□ -1.2
TARDBP-230ENST00000639083 SPINK8P0C7L1 97 aa7.55□□□□□ -1.2
TARDBP-230ENST00000639083 EGFEM1PQ0D2K5 195 aa7.55□□□□□ -1.2
TARDBP-230ENST00000639083 GAGE6Q13070 117 aa7.55□□□□□ -1.2
TARDBP-230ENST00000639083 ATP6V0E2Q8NHE4 81 aa7.55□□□□□ -1.2
TARDBP-230ENST00000639083 A0A096LPF7 62 aa7.54□□□□□ -1.2
TARDBP-230ENST00000639083 PAX4O43316 350 aa7.54□□□□□ -1.2
TARDBP-230ENST00000639083 SMIM13P0DJ93 91 aa7.54□□□□□ -1.2
TARDBP-230ENST00000639083 TIRAPP58753 221 aa7.54□□□□□ -1.2
TARDBP-230ENST00000639083 SMAGPQ0VAQ4 97 aa7.54□□□□□ -1.2
TARDBP-230ENST00000639083 SRSF9Q13242 221 aaKnown RBP eCLIP7.54□□□□□ -1.2
TARDBP-230ENST00000639083 VAMP3Q15836 100 aa7.54□□□□□ -1.2
TARDBP-230ENST00000639083 LINC00242Q5T6M2 205 aa7.54□□□□□ -1.2
TARDBP-230ENST00000639083 TMEM101Q96IK0 257 aa7.54□□□□□ -1.2
TARDBP-230ENST00000639083 NHP2Q9NX24 153 aaKnown RBP7.54□□□□□ -1.2
TARDBP-230ENST00000639083 IGHV1-58A0A0C4DH39 117 aa7.54□□□□□ -1.2
TARDBP-230ENST00000639083 A8MZ25 164 aa7.54□□□□□ -1.2
TARDBP-230ENST00000639083 H7C423 109 aa7.54□□□□□ -1.2
TARDBP-230ENST00000639083 K7ERJ3 54 aa7.54□□□□□ -1.2
TARDBP-230ENST00000639083 CHCHD5Q9BSY4 110 aa7.54□□□□□ -1.2
TARDBP-230ENST00000639083 G3V4G9 280 aa7.53□□□□□ -1.2
TARDBP-230ENST00000639083 SPART-AS1P0CW21 52 aa7.53□□□□□ -1.2
TARDBP-230ENST00000639083 VSIG2Q96IQ7 327 aa7.53□□□□□ -1.2
TARDBP-230ENST00000639083 IGLV4-60A0A075B6I1 120 aa7.53□□□□□ -1.2
TARDBP-230ENST00000639083 C9orf118A6NHY6 69 aa7.53□□□□□ -1.2
TARDBP-230ENST00000639083 IGLV5-45A0A087WSX0 123 aa7.52□□□□□ -1.21
TARDBP-230ENST00000639083 H3BUT2 72 aa7.52□□□□□ -1.21
TARDBP-230ENST00000639083 ATP5G1P05496 136 aa7.52□□□□□ -1.21
TARDBP-230ENST00000639083 HERVK_113P63121 156 aa7.52□□□□□ -1.21
TARDBP-230ENST00000639083 UBE2V1Q13404 147 aa7.52□□□□□ -1.21
TARDBP-230ENST00000639083 C10orf126Q8N4M7 172 aa7.52□□□□□ -1.21
TARDBP-230ENST00000639083 FAM19A3Q7Z5A8 133 aa7.52□□□□□ -1.21
TARDBP-230ENST00000639083 RETNQ9HD89 108 aa7.52□□□□□ -1.21
TARDBP-230ENST00000639083 TRAV26-1A0A087WT03 109 aa7.51□□□□□ -1.21
TARDBP-230ENST00000639083 F5H768 121 aa7.51□□□□□ -1.21
TARDBP-230ENST00000639083 HTN3P15516 51 aa7.51□□□□□ -1.21
TARDBP-230ENST00000639083 C12orf74Q32Q52 190 aa7.51□□□□□ -1.21
TARDBP-230ENST00000639083 IGKV3OR2-268A0A0C4DH90 116 aa7.5□□□□□ -1.21
TARDBP-230ENST00000639083 SPANXB1Q9NS25 103 aaPredicted RBP7.5□□□□□ -1.21
TARDBP-230ENST00000639083 NDUFA12Q9UI09 145 aa7.5□□□□□ -1.21
TARDBP-230ENST00000639083 A0A0J9YXY3 114 aa7.5□□□□□ -1.21
TARDBP-230ENST00000639083 TMEM262E9PQX1 116 aa7.5□□□□□ -1.21
TARDBP-230ENST00000639083 NOTCH1P46531 2555 aa7.5□□□□□ -1.21
TARDBP-230ENST00000639083 IGHV3-30P01768 117 aa7.49□□□□□ -1.21
TARDBP-230ENST00000639083 IGHV3-30-5P0DP03 117 aa7.49□□□□□ -1.21
TARDBP-230ENST00000639083 SAMD5Q5TGI4 173 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms