RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 IGHV1-58A0A0C4DH39 117 aa11.57□□□□□ -0.56
CLN6-220ENST00000637450 A0A1B0GUT8 65 aa11.57□□□□□ -0.56
CLN6-220ENST00000637450 CEBPGP53567 150 aa11.57□□□□□ -0.56
CLN6-220ENST00000637450 TSKUQ8WUA8 353 aa11.57□□□□□ -0.56
CLN6-220ENST00000637450 MRAP2Q96G30 205 aa11.57□□□□□ -0.56
CLN6-220ENST00000637450 CDC42SE2Q9NRR3 84 aa11.57□□□□□ -0.56
CLN6-220ENST00000637450 TRBV27A0A0K0K1C4 114 aa11.56□□□□□ -0.56
CLN6-220ENST00000637450 HIGD1CA8MV81 97 aa11.56□□□□□ -0.56
CLN6-220ENST00000637450 RAB4AP20338 218 aa11.56□□□□□ -0.56
CLN6-220ENST00000637450 PRR3P79522 188 aaKnown RBP11.56□□□□□ -0.56
CLN6-220ENST00000637450 MRPL52Q86TS9 123 aaKnown RBP11.56□□□□□ -0.56
CLN6-220ENST00000637450 LINC00474Q9P2X8 69 aa11.56□□□□□ -0.56
CLN6-220ENST00000637450 LRP2P98164 4655 aa11.55□□□□□ -0.56
CLN6-220ENST00000637450 SS18Q15532 418 aa11.55□□□□□ -0.56
CLN6-220ENST00000637450 CD164L2Q6UWJ8 174 aa11.55□□□□□ -0.56
CLN6-220ENST00000637450 LINC01551Q86U37 167 aa11.55□□□□□ -0.56
CLN6-220ENST00000637450 LINC00526Q96FQ7 95 aa11.55□□□□□ -0.56
CLN6-220ENST00000637450 ZNF664Q8N3J9 261 aa11.54□□□□□ -0.56
CLN6-220ENST00000637450 LINC01600Q96MT4 127 aa11.54□□□□□ -0.56
CLN6-220ENST00000637450 SMIM7Q9BQ49 75 aa11.54□□□□□ -0.56
CLN6-220ENST00000637450 PKIGQ9Y2B9 76 aa11.54□□□□□ -0.56
CLN6-220ENST00000637450 AKAP14Q86UN6 197 aa11.53□□□□□ -0.56
CLN6-220ENST00000637450 CARD19Q96LW7 228 aa11.53□□□□□ -0.56
CLN6-220ENST00000637450 EIF5A2Q9GZV4 153 aaKnown RBP11.53□□□□□ -0.56
CLN6-220ENST00000637450 OSTCQ9NRP0 149 aa11.53□□□□□ -0.56
CLN6-220ENST00000637450 C7orf77A4D0Y5 90 aa11.52□□□□□ -0.57
CLN6-220ENST00000637450 AMN1Q8IY45 258 aa11.52□□□□□ -0.57
CLN6-220ENST00000637450 ZNF561-AS1K7EIQ3 104 aa11.51□□□□□ -0.57
CLN6-220ENST00000637450 VCYO14598 125 aa11.51□□□□□ -0.57
CLN6-220ENST00000637450 SYCNQ0VAF6 134 aa11.51□□□□□ -0.57
CLN6-220ENST00000637450 ZNF727A8MUV8 499 aa11.5□□□□□ -0.57
CLN6-220ENST00000637450 RNF213Q63HN8 5207 aa11.49□□□□□ -0.57
CLN6-220ENST00000637450 SMKR1H3BMG3 65 aa11.49□□□□□ -0.57
CLN6-220ENST00000637450 SRP19P09132 144 aaKnown RBP11.49□□□□□ -0.57
CLN6-220ENST00000637450 CSDC2Q9Y534 153 aaKnown RBP11.49□□□□□ -0.57
CLN6-220ENST00000637450 V9GYV3 84 aa11.49□□□□□ -0.57
CLN6-220ENST00000637450 C1orf196B1AJZ1 125 aa11.48□□□□□ -0.57
CLN6-220ENST00000637450 PPP1R17O96001 155 aa11.48□□□□□ -0.57
CLN6-220ENST00000637450 FCER1GP30273 86 aa11.48□□□□□ -0.57
CLN6-220ENST00000637450 CAMPP49913 170 aa11.48□□□□□ -0.57
CLN6-220ENST00000637450 RIGQ13278 110 aa11.48□□□□□ -0.57
CLN6-220ENST00000637450 SPINK6Q6UWN8 80 aa11.48□□□□□ -0.57
CLN6-220ENST00000637450 NRACQ8N912 160 aa11.48□□□□□ -0.57
CLN6-220ENST00000637450 NUP35Q8NFH5 326 aa11.48□□□□□ -0.57
CLN6-220ENST00000637450 SRSF9Q13242 221 aaKnown RBP eCLIP11.47□□□□□ -0.57
CLN6-220ENST00000637450 ISOC2Q96AB3 205 aa11.47□□□□□ -0.57
CLN6-220ENST00000637450 UBE2D4Q9Y2X8 147 aa11.47□□□□□ -0.57
CLN6-220ENST00000637450 IGLV4-69A0A075B6H9 119 aa11.46□□□□□ -0.57
CLN6-220ENST00000637450 A0A0J9YXV3 536 aa11.46□□□□□ -0.57
CLN6-220ENST00000637450 COX7A2LO14548 114 aa11.46□□□□□ -0.57
CLN6-220ENST00000637450 MALP21145 153 aa11.46□□□□□ -0.57
CLN6-220ENST00000637450 PTTG1IPP53801 180 aa11.46□□□□□ -0.57
CLN6-220ENST00000637450 SUMO2P61956 95 aaKnown RBP11.46□□□□□ -0.57
CLN6-220ENST00000637450 SMAGPQ0VAQ4 97 aa11.46□□□□□ -0.57
CLN6-220ENST00000637450 Q6ZRP5 223 aa11.46□□□□□ -0.57
CLN6-220ENST00000637450 hCG_2014768A0A024R1R8 64 aa11.45□□□□□ -0.58
CLN6-220ENST00000637450 LOC107984640A0A0U1RRK4 108 aa11.45□□□□□ -0.58
CLN6-220ENST00000637450 KRTAP10-8P60410 259 aa11.45□□□□□ -0.58
CLN6-220ENST00000637450 KIR2DL4Q99706 377 aa11.45□□□□□ -0.58
CLN6-220ENST00000637450 GAGE2BQ13066 116 aa11.44□□□□□ -0.58
CLN6-220ENST00000637450 TMEM241Q24JQ0 296 aa11.44□□□□□ -0.58
CLN6-220ENST00000637450 RNASE13Q5GAN3 156 aaKnown RBP11.44□□□□□ -0.58
CLN6-220ENST00000637450 REG3GQ6UW15 175 aa11.44□□□□□ -0.58
CLN6-220ENST00000637450 NAT8BQ9UHF3 227 aa11.44□□□□□ -0.58
CLN6-220ENST00000637450 TRAV13-1A0A0B4J241 112 aa11.43□□□□□ -0.58
CLN6-220ENST00000637450 PPP1R2P9O14990 202 aa11.43□□□□□ -0.58
CLN6-220ENST00000637450 ODF1Q14990 250 aa11.43□□□□□ -0.58
CLN6-220ENST00000637450 FAM104BQ5XKR9 115 aa11.43□□□□□ -0.58
CLN6-220ENST00000637450 RPL23P62829 140 aaKnown RBP11.42□□□□□ -0.58
CLN6-220ENST00000637450 MRPL51Q4U2R6 128 aaKnown RBP11.42□□□□□ -0.58
CLN6-220ENST00000637450 FAM74A3Q4VXF1 159 aa11.42□□□□□ -0.58
CLN6-220ENST00000637450 C2orf48Q96LS8 159 aa11.42□□□□□ -0.58
CLN6-220ENST00000637450 CAMK2N2Q96S95 79 aa11.42□□□□□ -0.58
CLN6-220ENST00000637450 TIMM21Q9BVV7 248 aa11.42□□□□□ -0.58
CLN6-220ENST00000637450 A0A1W2PNN7 141 aa11.41□□□□□ -0.58
CLN6-220ENST00000637450 C5orf38Q86SI9 138 aa11.41□□□□□ -0.58
CLN6-220ENST00000637450 TMEM18Q96B42 140 aa11.41□□□□□ -0.58
CLN6-220ENST00000637450 C20orf78Q9BR46 151 aa11.41□□□□□ -0.58
CLN6-220ENST00000637450 TRBV24-1A0A075B6N3 115 aa11.4□□□□□ -0.58
CLN6-220ENST00000637450 LINC00862A6NCI5 91 aa11.4□□□□□ -0.58
CLN6-220ENST00000637450 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.4□□□□□ -0.58
CLN6-220ENST00000637450 APOMO95445 188 aa11.4□□□□□ -0.58
CLN6-220ENST00000637450 Q6ZUT4 128 aa11.4□□□□□ -0.58
CLN6-220ENST00000637450 SMIM27A0A1W2PRY6 76 aa11.39□□□□□ -0.59
CLN6-220ENST00000637450 RPL32P62910 135 aaKnown RBP11.39□□□□□ -0.59
CLN6-220ENST00000637450 ADIRFQ15847 76 aa11.38□□□□□ -0.59
CLN6-220ENST00000637450 A0A1B0GW15 77 aa11.37□□□□□ -0.59
CLN6-220ENST00000637450 C9JQL5 133 aa11.37□□□□□ -0.59
CLN6-220ENST00000637450 CKS2P33552 79 aa11.37□□□□□ -0.59
CLN6-220ENST00000637450 RNF151Q2KHN1 245 aa11.37□□□□□ -0.59
CLN6-220ENST00000637450 C9orf116Q5BN46 136 aaPredicted RBP11.37□□□□□ -0.59
CLN6-220ENST00000637450 FAM104AQ969W3 186 aa11.37□□□□□ -0.59
CLN6-220ENST00000637450 NAT8Q9UHE5 227 aa11.37□□□□□ -0.59
CLN6-220ENST00000637450 TCAPO15273 167 aa11.36□□□□□ -0.59
CLN6-220ENST00000637450 RPL39P62891 51 aaKnown RBP11.36□□□□□ -0.59
CLN6-220ENST00000637450 SPAG11BQ08648 103 aa11.36□□□□□ -0.59
CLN6-220ENST00000637450 OPRPNQ99935 248 aaPredicted RBP11.36□□□□□ -0.59
CLN6-220ENST00000637450 TNFRSF6BO95407 300 aa11.35□□□□□ -0.59
CLN6-220ENST00000637450 RPL18AQ02543 176 aaKnown RBP11.35□□□□□ -0.59
CLN6-220ENST00000637450 OR10D4PQ8NGN7 298 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms