RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 PTH2Q96A98 100 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 FXYD5Q96DB9 178 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 TVP23CQ96ET8 276 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 DIRAS2Q96HU8 199 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 MRPS26Q9BYN8 205 aaKnown RBP1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 NPVFQ9HCQ7 196 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 SLC39A9Q9NUM3 307 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 MRPL16Q9NX20 251 aaKnown RBP1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 ZNF492Q9P255 531 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 RSL24D1Q9UHA3 163 aaKnown RBP1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 HHLA3Q9XRX5 114 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 PRELID1Q9Y255 219 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 LENEPQ9Y5L5 61 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 TRBV6-4A0A1B0GX49 114 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 C9JCJ5 164 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 C8orf87E5RJ46 101 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 IFNA5P01569 189 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 IGHV3-53P01767 116 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 TYMSP04818 313 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 PET100P0DJ07 73 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 RNASE3P12724 160 aaKnown RBP1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 HTN1P15515 57 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 PVALBP20472 110 aaPredicted RBP1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 EVI2AP22794 236 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 SRIP30626 198 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 AP3S2P59780 193 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 RRAS2P62070 204 aaPredicted RBP1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 IAH1Q2TAA2 248 aaPredicted RBP1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 DNLZQ5SXM8 178 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 LELP1Q5T871 98 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 CFAP126Q5VTH2 177 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 C10orf113Q5VZT2 155 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 MIC13Q5XKP0 118 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 KRTAP26-1Q6PEX3 210 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 SPINT4Q6UDR6 99 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 DAZ4Q86SG3 579 aaKnown RBP1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 S100A7AQ86SG5 101 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 EXOC3-AS1Q8N2X6 119 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 GATD1Q8NB37 220 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 SUN5Q8TC36 379 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 DNAJC30Q96LL9 226 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 PFDN5Q99471 154 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 NPCDR1Q9BY65 106 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 LYRM2Q9NU23 88 aaPredicted RBP1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 UQCC1Q9NVA1 299 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 PSENENQ9NZ42 101 aa1.36□□□□□ -2.19
SMARCB1-208ENST00000634926 UBE2L5PA0A1B0GUS4 154 aa1.35□□□□□ -2.19
SMARCB1-208ENST00000634926 M0R2P5 195 aa1.35□□□□□ -2.19
SMARCB1-208ENST00000634926 PLA2G10O15496 165 aa1.35□□□□□ -2.19
SMARCB1-208ENST00000634926 CST7O76096 145 aa1.35□□□□□ -2.19
SMARCB1-208ENST00000634926 MGST1P10620 155 aaKnown RBP1.35□□□□□ -2.19
SMARCB1-208ENST00000634926 RNASE4P34096 147 aaKnown RBP1.35□□□□□ -2.19
SMARCB1-208ENST00000634926 FAUP35544 74 aaKnown RBP1.35□□□□□ -2.19
SMARCB1-208ENST00000634926 SULT1A1P50225 295 aa1.35□□□□□ -2.19
SMARCB1-208ENST00000634926 ZNF80P51504 273 aaPredicted RBP1.35□□□□□ -2.19
SMARCB1-208ENST00000634926 TMEM241Q24JQ0 296 aa1.35□□□□□ -2.19
SMARCB1-208ENST00000634926 KRTAP13-2Q52LG2 175 aa1.35□□□□□ -2.19
SMARCB1-208ENST00000634926 TMEM78Q5T7P6 136 aa1.35□□□□□ -2.19
SMARCB1-208ENST00000634926 IGFL1Q6UW32 110 aa1.35□□□□□ -2.19
SMARCB1-208ENST00000634926 MIR17HGQ75NE6 70 aa1.35□□□□□ -2.19
SMARCB1-208ENST00000634926 NIT1Q86X76 327 aa1.35□□□□□ -2.19
SMARCB1-208ENST00000634926 AMN1Q8IY45 258 aa1.35□□□□□ -2.19
SMARCB1-208ENST00000634926 TOMM5Q8N4H5 51 aa1.35□□□□□ -2.19
SMARCB1-208ENST00000634926 MCFD2Q8NI22 146 aa1.35□□□□□ -2.19
SMARCB1-208ENST00000634926 TXNDC17Q9BRA2 123 aa1.35□□□□□ -2.19
SMARCB1-208ENST00000634926 GTSF1LQ9H1H1 148 aa1.35□□□□□ -2.19
SMARCB1-208ENST00000634926 TRAV8-1A0A0A6YYK1 113 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 TRGV4A0A0C4DH28 118 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 SPRR5A0A1B0GTR4 108 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 NAP1L6A6NFF2 107 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 FAM24AA6NFZ4 105 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 GGTLC3B5MD39 225 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 K7ERS5 55 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 LECT2O14960 151 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 GNRH2O43555 120 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 GPX1P07203 203 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 PFN1P07737 140 aaKnown RBP1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 OR10J4P0C629 311 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 NBEAP1P0C6P0 100 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 IL7P13232 177 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 FGF7P21781 194 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 S100A11P31949 105 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 INPP1P49441 399 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 H2BFSP57053 126 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 KRTAP10-10P60014 251 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 CNBPP62633 177 aaKnown RBP1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 RBX1P62877 108 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 RHOHQ15669 191 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 PYDC2Q56P42 97 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 Q6ZRU5 148 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 ZFP82Q8N141 532 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 C3orf22Q8N5N4 141 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 C9orf163Q8N9P6 203 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 STOML3Q8TAV4 291 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 SPACA4Q8TDM5 124 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 RMI2Q96E14 147 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 SEC22CQ9BRL7 303 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 KRTAP4-1Q9BYQ7 146 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 WDR61Q9GZS3 305 aaKnown RBP1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 OTORQ9NRC9 128 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms